RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 NPHP4O75161 1426 aaPredicted RBP28.31■■■□□ 2.12
CENPA-201ENST00000233505 RIMS2Q9UQ26 1411 aa28.31■■■□□ 2.12
CENPA-201ENST00000233505 HDGFP51858 240 aaKnown RBP28.3■■■□□ 2.12
CENPA-201ENST00000233505 POLR1AO95602 1720 aaPredicted RBP28.29■■■□□ 2.12
CENPA-201ENST00000233505 ZNF335Q9H4Z2 1342 aaPredicted RBP28.29■■■□□ 2.12
CENPA-201ENST00000233505 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.29■■■□□ 2.12
CENPA-201ENST00000233505 SPATA31E1Q6ZUB1 1445 aa28.26■■■□□ 2.11
CENPA-201ENST00000233505 PCGF6Q9BYE7 350 aa28.24■■■□□ 2.11
CENPA-201ENST00000233505 RPGRIP1LQ68CZ1 1315 aa28.23■■■□□ 2.11
CENPA-201ENST00000233505 PLEKHG1Q9ULL1 1385 aa28.23■■■□□ 2.11
CENPA-201ENST00000233505 DHX57Q6P158 1386 aaKnown RBP28.22■■■□□ 2.11
CENPA-201ENST00000233505 ZNF326Q5BKZ1 582 aaKnown RBP28.21■■■□□ 2.11
CENPA-201ENST00000233505 KIF1BO60333 1816 aa28.2■■■□□ 2.11
CENPA-201ENST00000233505 IQGAP1P46940 1657 aa28.2■■■□□ 2.11
CENPA-201ENST00000233505 NEXMIFQ5QGS0 1516 aa28.19■■■□□ 2.1
CENPA-201ENST00000233505 PPP1R15AO75807 674 aaPredicted RBP28.19■■■□□ 2.1
CENPA-201ENST00000233505 MYO5BQ9ULV0 1848 aa28.19■■■□□ 2.1
CENPA-201ENST00000233505 VGFO15240 615 aaPredicted RBP28.11■■■□□ 2.09
CENPA-201ENST00000233505 IQSEC2Q5JU85 1478 aa28.1■■■□□ 2.09
CENPA-201ENST00000233505 SETBP1Q9Y6X0 1596 aa28.09■■■□□ 2.09
CENPA-201ENST00000233505 NUTM2DQ5VT03 806 aaPredicted RBP28.09■■■□□ 2.09
CENPA-201ENST00000233505 DIP2AQ14689 1571 aa28.08■■■□□ 2.09
CENPA-201ENST00000233505 RGL3Q3MIN7 710 aa28.08■■■□□ 2.09
CENPA-201ENST00000233505 ADAMTS13Q76LX8 1427 aa28.08■■■□□ 2.09
CENPA-201ENST00000233505 TBX22Q9Y458 520 aa28.07■■■□□ 2.08
CENPA-201ENST00000233505 MYOM2P54296 1465 aa28.04■■■□□ 2.08
CENPA-201ENST00000233505 BCANQ96GW7 911 aa28.04■■■□□ 2.08
CENPA-201ENST00000233505 SLC26A8Q96RN1 970 aa28.04■■■□□ 2.08
CENPA-201ENST00000233505 PIK3R4Q99570 1358 aa28.03■■■□□ 2.08
CENPA-201ENST00000233505 STAC3Q96MF2 364 aa28.03■■■□□ 2.08
CENPA-201ENST00000233505 PPLO60437 1756 aa28.03■■■□□ 2.08
CENPA-201ENST00000233505 CPS1P31327 1500 aa28.01■■■□□ 2.07
CENPA-201ENST00000233505 NRXN3Q9Y4C0 1643 aa28■■■□□ 2.07
CENPA-201ENST00000233505 IFT172Q9UG01 1749 aa28■■■□□ 2.07
CENPA-201ENST00000233505 NRXN1Q9ULB1 1477 aa28■■■□□ 2.07
CENPA-201ENST00000233505 ADGRF5Q8IZF2 1346 aa27.98■■■□□ 2.07
CENPA-201ENST00000233505 UBAP1LF5GYI3 381 aa27.98■■■□□ 2.07
CENPA-201ENST00000233505 PIK3C2GO75747 1445 aa27.97■■■□□ 2.07
CENPA-201ENST00000233505 KCNA6P17658 529 aa27.96■■■□□ 2.07
CENPA-201ENST00000233505 NWD1Q149M9 1564 aa27.95■■■□□ 2.07
CENPA-201ENST00000233505 CLSPNQ9HAW4 1339 aa27.93■■■□□ 2.06
CENPA-201ENST00000233505 NKTRP30414 1462 aaKnown RBP27.93■■■□□ 2.06
CENPA-201ENST00000233505 SIN3AQ96ST3 1273 aa27.92■■■□□ 2.06
CENPA-201ENST00000233505 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
CENPA-201ENST00000233505 STRCP1A6NGW2 1772 aa27.91■■■□□ 2.06
CENPA-201ENST00000233505 ALKQ9UM73 1620 aa27.9■■■□□ 2.06
CENPA-201ENST00000233505 DCAF11Q8TEB1 546 aa27.9■■■□□ 2.06
CENPA-201ENST00000233505 METP08581 1390 aa27.89■■■□□ 2.06
CENPA-201ENST00000233505 PRAG1Q86YV5 1406 aa27.87■■■□□ 2.05
CENPA-201ENST00000233505 LRRC7Q96NW7 1537 aa27.87■■■□□ 2.05
CENPA-201ENST00000233505 PTPRUQ92729 1446 aa27.86■■■□□ 2.05
CENPA-201ENST00000233505 SETD1AO15047 1707 aaKnown RBP27.85■■■□□ 2.05
CENPA-201ENST00000233505 C14orf93Q9H972 538 aaKnown RBP27.85■■■□□ 2.05
CENPA-201ENST00000233505 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
CENPA-201ENST00000233505 SCAF1Q9H7N4 1312 aaKnown RBP27.83■■■□□ 2.05
CENPA-201ENST00000233505 PIP4K2BP78356 416 aa27.82■■■□□ 2.04
CENPA-201ENST00000233505 L3MBTL2Q969R5 705 aa27.82■■■□□ 2.04
CENPA-201ENST00000233505 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
CENPA-201ENST00000233505 KDM2AQ9Y2K7 1162 aa27.82■■■□□ 2.04
CENPA-201ENST00000233505 CHD2O14647 1828 aaKnown RBP27.82■■■□□ 2.04
CENPA-201ENST00000233505 LAMC1P11047 1609 aa27.81■■■□□ 2.04
CENPA-201ENST00000233505 XRN1Q8IZH2 1706 aaKnown RBP27.81■■■□□ 2.04
CENPA-201ENST00000233505 PTCH1Q13635 1447 aa27.79■■■□□ 2.04
CENPA-201ENST00000233505 NCOA3Q9Y6Q9 1424 aa27.79■■■□□ 2.04
CENPA-201ENST00000233505 ASXL1Q8IXJ9 1541 aa27.78■■■□□ 2.04
CENPA-201ENST00000233505 TMEM94Q12767 1356 aa27.78■■■□□ 2.04
CENPA-201ENST00000233505 TOM1O60784 492 aa27.77■■■□□ 2.04
CENPA-201ENST00000233505 CFAP70Q5T0N1 1121 aa27.77■■■□□ 2.04
CENPA-201ENST00000233505 PROSER2Q86WR7 435 aaPredicted RBP27.77■■■□□ 2.04
CENPA-201ENST00000233505 TECPR2O15040 1411 aa27.76■■■□□ 2.04
CENPA-201ENST00000233505 LRPPRCP42704 1394 aaKnown RBP27.76■■■□□ 2.03
CENPA-201ENST00000233505 TONSLQ96HA7 1378 aa27.76■■■□□ 2.03
CENPA-201ENST00000233505 ABCC11Q96J66 1382 aa27.73■■■□□ 2.03
CENPA-201ENST00000233505 CCER1Q8TC90 406 aaPredicted RBP27.73■■■□□ 2.03
CENPA-201ENST00000233505 ADGRB1O14514 1584 aa27.73■■■□□ 2.03
CENPA-201ENST00000233505 YTHDC2Q9H6S0 1430 aaKnown RBP27.72■■■□□ 2.03
CENPA-201ENST00000233505 TMEM132EQ6IEE7 984 aa27.7■■■□□ 2.02
CENPA-201ENST00000233505 TIMELESSQ9UNS1 1208 aa27.69■■■□□ 2.02
CENPA-201ENST00000233505 ROBO2Q9HCK4 1378 aa27.69■■■□□ 2.02
CENPA-201ENST00000233505 HSPA1LP34931 641 aa27.68■■■□□ 2.02
CENPA-201ENST00000233505 DISP3Q9P2K9 1392 aa27.68■■■□□ 2.02
CENPA-201ENST00000233505 SIRT1Q96EB6 747 aa27.67■■■□□ 2.02
CENPA-201ENST00000233505 KIAA1210Q9ULL0 1709 aa27.67■■■□□ 2.02
CENPA-201ENST00000233505 XIRP1Q702N8 1843 aaKnown RBP27.66■■■□□ 2.02
CENPA-201ENST00000233505 RBM33Q96EV2 1170 aaKnown RBP27.65■■■□□ 2.02
CENPA-201ENST00000233505 FAM135BQ49AJ0 1406 aa27.65■■■□□ 2.02
CENPA-201ENST00000233505 KNDC1Q76NI1 1749 aa27.64■■■□□ 2.02
CENPA-201ENST00000233505 MSH6P52701 1360 aa27.64■■■□□ 2.02
CENPA-201ENST00000233505 DLC1Q96QB1 1528 aa27.63■■■□□ 2.01
CENPA-201ENST00000233505 DCCP43146 1447 aa27.62■■■□□ 2.01
CENPA-201ENST00000233505 STK26Q9P289 416 aa27.62■■■□□ 2.01
CENPA-201ENST00000233505 ADGRL3Q9HAR2 1447 aa27.61■■■□□ 2.01
CENPA-201ENST00000233505 C19orf44Q9H6X5 657 aa27.6■■■□□ 2.01
CENPA-201ENST00000233505 C14orf37Q86TY3 774 aa27.57■■■□□ 2
CENPA-201ENST00000233505 NBPF1Q3BBV0 1214 aa27.56■■■□□ 2
CENPA-201ENST00000233505 NBPF8Q3BBV2 869 aa27.56■■■□□ 2
CENPA-201ENST00000233505 GPRASP1Q5JY77 1395 aa27.56■■■□□ 2
CENPA-201ENST00000233505 TRPM1Q7Z4N2 1603 aa27.54■■■□□ 2
CENPA-201ENST00000233505 CADPS2Q86UW7 1296 aa27.54■■■□□ 2
CENPA-201ENST00000233505 RALGAPBQ86X10 1494 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms