RNA–Protein interactions for RNA: ENST00000229379.2

COX6A1-201, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX6A1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-201ENST00000229379 ZFYVE9O95405 1425 aa24.33■■□□□ 1.49
COX6A1-201ENST00000229379 NUTM2DQ5VT03 806 aaPredicted RBP24.32■■□□□ 1.48
COX6A1-201ENST00000229379 ILDR2Q71H61 639 aa24.32■■□□□ 1.48
COX6A1-201ENST00000229379 RBM33Q96EV2 1170 aaKnown RBP24.32■■□□□ 1.48
COX6A1-201ENST00000229379 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
COX6A1-201ENST00000229379 CHGAP10645 457 aaKnown RBP24.3■■□□□ 1.48
COX6A1-201ENST00000229379 RIMS2Q9UQ26 1411 aa24.29■■□□□ 1.48
COX6A1-201ENST00000229379 TOM1O60784 492 aa24.29■■□□□ 1.48
COX6A1-201ENST00000229379 CHD2O14647 1828 aaKnown RBP24.28■■□□□ 1.48
COX6A1-201ENST00000229379 NAIPQ13075 1403 aa24.27■■□□□ 1.48
COX6A1-201ENST00000229379 BCANQ96GW7 911 aa24.23■■□□□ 1.47
COX6A1-201ENST00000229379 NWD1Q149M9 1564 aa24.23■■□□□ 1.47
COX6A1-201ENST00000229379 CLTCL1P53675 1640 aa24.21■■□□□ 1.47
COX6A1-201ENST00000229379 TMEM94Q12767 1356 aa24.2■■□□□ 1.46
COX6A1-201ENST00000229379 PLEKHG1Q9ULL1 1385 aa24.2■■□□□ 1.46
COX6A1-201ENST00000229379 KCNA6P17658 529 aa24.2■■□□□ 1.46
COX6A1-201ENST00000229379 PPP1R15AO75807 674 aaPredicted RBP24.17■■□□□ 1.46
COX6A1-201ENST00000229379 ADAMTS13Q76LX8 1427 aa24.17■■□□□ 1.46
COX6A1-201ENST00000229379 NRXN3Q9Y4C0 1643 aa24.17■■□□□ 1.46
COX6A1-201ENST00000229379 PROSER2Q86WR7 435 aaPredicted RBP24.16■■□□□ 1.46
COX6A1-201ENST00000229379 MED1Q15648 1581 aaPredicted RBP24.16■■□□□ 1.46
COX6A1-201ENST00000229379 KIF1BO60333 1816 aa24.14■■□□□ 1.45
COX6A1-201ENST00000229379 HFM1A2PYH4 1435 aa24.13■■□□□ 1.45
COX6A1-201ENST00000229379 NKTRP30414 1462 aaKnown RBP24.11■■□□□ 1.45
COX6A1-201ENST00000229379 ROBO1Q9Y6N7 1651 aa24.11■■□□□ 1.45
COX6A1-201ENST00000229379 TRIM52Q96A61 297 aa24.1■■□□□ 1.45
COX6A1-201ENST00000229379 TRPM2O94759 1503 aa24.1■■□□□ 1.45
COX6A1-201ENST00000229379 PTPRUQ92729 1446 aa24.1■■□□□ 1.45
COX6A1-201ENST00000229379 NEXMIFQ5QGS0 1516 aa24.07■■□□□ 1.44
COX6A1-201ENST00000229379 FOXD1Q16676 465 aa24.07■■□□□ 1.44
COX6A1-201ENST00000229379 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.07■■□□□ 1.44
COX6A1-201ENST00000229379 TBX22Q9Y458 520 aa24.07■■□□□ 1.44
COX6A1-201ENST00000229379 DIP2AQ14689 1571 aa24.05■■□□□ 1.44
COX6A1-201ENST00000229379 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.04■■□□□ 1.44
COX6A1-201ENST00000229379 HDGFP51858 240 aaKnown RBP24.04■■□□□ 1.44
COX6A1-201ENST00000229379 ZNF326Q5BKZ1 582 aaKnown RBP24.04■■□□□ 1.44
COX6A1-201ENST00000229379 SETBP1Q9Y6X0 1596 aa24.02■■□□□ 1.44
COX6A1-201ENST00000229379 XRN1Q8IZH2 1706 aaKnown RBP24.01■■□□□ 1.43
COX6A1-201ENST00000229379 SLC4A1APQ9BWU0 796 aaKnown RBP24■■□□□ 1.43
COX6A1-201ENST00000229379 FAM135BQ49AJ0 1406 aa24■■□□□ 1.43
COX6A1-201ENST00000229379 SETD1AO15047 1707 aaKnown RBP23.99■■□□□ 1.43
COX6A1-201ENST00000229379 METP08581 1390 aa23.99■■□□□ 1.43
COX6A1-201ENST00000229379 PPLO60437 1756 aa23.98■■□□□ 1.43
COX6A1-201ENST00000229379 MSH6P52701 1360 aa23.98■■□□□ 1.43
COX6A1-201ENST00000229379 PHLPP1O60346 1717 aa23.97■■□□□ 1.43
COX6A1-201ENST00000229379 AMOTL2Q9Y2J4 779 aa23.97■■□□□ 1.43
COX6A1-201ENST00000229379 SLAIN2Q9P270 581 aa23.94■■□□□ 1.42
COX6A1-201ENST00000229379 PIK3R4Q99570 1358 aa23.92■■□□□ 1.42
COX6A1-201ENST00000229379 SOCS7O14512 581 aa23.91■■□□□ 1.42
COX6A1-201ENST00000229379 C14orf37Q86TY3 774 aa23.91■■□□□ 1.42
COX6A1-201ENST00000229379 NALCNQ8IZF0 1738 aa23.9■■□□□ 1.42
COX6A1-201ENST00000229379 IFT172Q9UG01 1749 aa23.88■■□□□ 1.41
COX6A1-201ENST00000229379 COL16A1Q07092 1604 aaPredicted RBP23.88■■□□□ 1.41
COX6A1-201ENST00000229379 MPHOSPH9Q99550 1183 aa23.87■■□□□ 1.41
COX6A1-201ENST00000229379 RGS17Q9UGC6 210 aaPredicted RBP23.87■■□□□ 1.41
COX6A1-201ENST00000229379 NCOA3Q9Y6Q9 1424 aa23.85■■□□□ 1.41
COX6A1-201ENST00000229379 C19orf44Q9H6X5 657 aa23.84■■□□□ 1.41
COX6A1-201ENST00000229379 PHF23Q9BUL5 403 aaPredicted RBP23.83■■□□□ 1.41
COX6A1-201ENST00000229379 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
COX6A1-201ENST00000229379 SETD5Q9C0A6 1442 aa23.81■■□□□ 1.4
COX6A1-201ENST00000229379 ATF3P18847 181 aa23.8■■□□□ 1.4
COX6A1-201ENST00000229379 SPATA31E1Q6ZUB1 1445 aa23.8■■□□□ 1.4
COX6A1-201ENST00000229379 ADGRF5Q8IZF2 1346 aa23.8■■□□□ 1.4
COX6A1-201ENST00000229379 CADPS2Q86UW7 1296 aa23.78■■□□□ 1.4
COX6A1-201ENST00000229379 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
COX6A1-201ENST00000229379 ROBO2Q9HCK4 1378 aa23.78■■□□□ 1.4
COX6A1-201ENST00000229379 AHDC1Q5TGY3 1603 aaPredicted RBP23.77■■□□□ 1.4
COX6A1-201ENST00000229379 CCDC144AA2RUR9 1427 aa23.77■■□□□ 1.4
COX6A1-201ENST00000229379 MST1RQ04912 1400 aa23.77■■□□□ 1.4
COX6A1-201ENST00000229379 VGFO15240 615 aaPredicted RBP23.77■■□□□ 1.4
COX6A1-201ENST00000229379 BRINP3Q76B58 766 aa23.77■■□□□ 1.4
COX6A1-201ENST00000229379 DDX17Q92841 729 aaKnown RBP23.76■■□□□ 1.39
COX6A1-201ENST00000229379 RPGRIP1LQ68CZ1 1315 aa23.75■■□□□ 1.39
COX6A1-201ENST00000229379 ADGRL3Q9HAR2 1447 aa23.75■■□□□ 1.39
COX6A1-201ENST00000229379 ASXL1Q8IXJ9 1541 aa23.74■■□□□ 1.39
COX6A1-201ENST00000229379 NHSL1Q5SYE7 1610 aa23.74■■□□□ 1.39
COX6A1-201ENST00000229379 LRP6O75581 1613 aa23.73■■□□□ 1.39
COX6A1-201ENST00000229379 DCCP43146 1447 aa23.72■■□□□ 1.39
COX6A1-201ENST00000229379 SHPRHQ149N8 1683 aa23.72■■□□□ 1.39
COX6A1-201ENST00000229379 POTEAQ6S8J7 498 aa23.71■■□□□ 1.39
COX6A1-201ENST00000229379 JCADQ9P266 1359 aa23.7■■□□□ 1.38
COX6A1-201ENST00000229379 PTCH1Q13635 1447 aa23.69■■□□□ 1.38
COX6A1-201ENST00000229379 TMEM132EQ6IEE7 984 aa23.67■■□□□ 1.38
COX6A1-201ENST00000229379 STK26Q9P289 416 aa23.66■■□□□ 1.38
COX6A1-201ENST00000229379 C1orf167Q5SNV9 1468 aa23.65■■□□□ 1.38
COX6A1-201ENST00000229379 PIK3C2GO75747 1445 aa23.64■■□□□ 1.37
COX6A1-201ENST00000229379 PRAG1Q86YV5 1406 aa23.64■■□□□ 1.37
COX6A1-201ENST00000229379 KNDC1Q76NI1 1749 aa23.64■■□□□ 1.37
COX6A1-201ENST00000229379 PLEKHH1Q9ULM0 1364 aa23.64■■□□□ 1.37
COX6A1-201ENST00000229379 WAPLQ7Z5K2 1190 aa23.63■■□□□ 1.37
COX6A1-201ENST00000229379 ORAI2Q96SN7 254 aa23.62■■□□□ 1.37
COX6A1-201ENST00000229379 RGPD8O14715 1765 aaPredicted RBP23.62■■□□□ 1.37
COX6A1-201ENST00000229379 ANKRD30BQ9BXX2 1392 aa23.61■■□□□ 1.37
COX6A1-201ENST00000229379 NUTM2BA6NNL0 878 aaPredicted RBP23.59■■□□□ 1.37
COX6A1-201ENST00000229379 NUTM2EB1AL46 878 aaPredicted RBP23.59■■□□□ 1.37
COX6A1-201ENST00000229379 NUTM2AQ8IVF1 878 aaPredicted RBP23.59■■□□□ 1.37
COX6A1-201ENST00000229379 LAMC1P11047 1609 aa23.58■■□□□ 1.36
COX6A1-201ENST00000229379 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
COX6A1-201ENST00000229379 LRPPRCP42704 1394 aaKnown RBP23.56■■□□□ 1.36
COX6A1-201ENST00000229379 NUTM2FA1L443 756 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms