RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.3
HCFC2-201ENST00000229330 DIAPH3Q9NSV4 1193 aa16.95■□□□□ 0.3
HCFC2-201ENST00000229330 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
HCFC2-201ENST00000229330 GRIN2BQ13224 1484 aa16.95■□□□□ 0.3
HCFC2-201ENST00000229330 GOLGA6L19H0YKK7 550 aa16.95■□□□□ 0.3
HCFC2-201ENST00000229330 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
HCFC2-201ENST00000229330 CASKIN1Q8WXD9 1431 aa16.95■□□□□ 0.3
HCFC2-201ENST00000229330 TEX35Q5T0J7 233 aa16.94■□□□□ 0.3
HCFC2-201ENST00000229330 GRPEL1Q9HAV7 217 aa16.94■□□□□ 0.3
HCFC2-201ENST00000229330 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
HCFC2-201ENST00000229330 CUX1P39880 1505 aa16.94■□□□□ 0.3
HCFC2-201ENST00000229330 ESPNB1AK53 854 aa16.93■□□□□ 0.3
HCFC2-201ENST00000229330 DZIP1LQ8IYY4 767 aaKnown RBP16.93■□□□□ 0.3
HCFC2-201ENST00000229330 CDCA7LQ96GN5 454 aa16.93■□□□□ 0.3
HCFC2-201ENST00000229330 REC8O95072 547 aa16.93■□□□□ 0.3
HCFC2-201ENST00000229330 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
HCFC2-201ENST00000229330 HSP90B1P14625 803 aaKnown RBP16.91■□□□□ 0.3
HCFC2-201ENST00000229330 GPS2Q13227 327 aa16.91■□□□□ 0.3
HCFC2-201ENST00000229330 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
HCFC2-201ENST00000229330 RRBP1Q9P2E9 1410 aaKnown RBP16.91■□□□□ 0.3
HCFC2-201ENST00000229330 BECN2A8MW95 431 aa16.91■□□□□ 0.3
HCFC2-201ENST00000229330 SETQ01105 290 aaPredicted RBP16.91■□□□□ 0.3
HCFC2-201ENST00000229330 PANK1Q8TE04 598 aa16.9■□□□□ 0.3
HCFC2-201ENST00000229330 HMGN5P82970 282 aaKnown RBP16.9■□□□□ 0.3
HCFC2-201ENST00000229330 TRAK1Q9UPV9 953 aa16.89■□□□□ 0.3
HCFC2-201ENST00000229330 PRXQ9BXM0 1461 aa16.89■□□□□ 0.29
HCFC2-201ENST00000229330 STK31Q9BXU1 1019 aa16.89■□□□□ 0.29
HCFC2-201ENST00000229330 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
HCFC2-201ENST00000229330 PRDM2Q13029 1718 aa16.89■□□□□ 0.29
HCFC2-201ENST00000229330 GPATCH3Q96I76 525 aa16.89■□□□□ 0.29
HCFC2-201ENST00000229330 NCOA2Q15596 1464 aa16.89■□□□□ 0.29
HCFC2-201ENST00000229330 CAVIN1Q6NZI2 390 aaKnown RBP16.88■□□□□ 0.29
HCFC2-201ENST00000229330 SLC4A10Q6U841 1118 aa16.88■□□□□ 0.29
HCFC2-201ENST00000229330 CCDC66A2RUB6 948 aa16.88■□□□□ 0.29
HCFC2-201ENST00000229330 TERF2IPQ9NYB0 399 aa16.87■□□□□ 0.29
HCFC2-201ENST00000229330 RNF214Q8ND24 703 aa16.87■□□□□ 0.29
HCFC2-201ENST00000229330 RILPL2Q969X0 211 aa16.87■□□□□ 0.29
HCFC2-201ENST00000229330 MRC2Q9UBG0 1479 aa16.87■□□□□ 0.29
HCFC2-201ENST00000229330 LMOD3Q0VAK6 560 aa16.87■□□□□ 0.29
HCFC2-201ENST00000229330 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
HCFC2-201ENST00000229330 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
HCFC2-201ENST00000229330 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
HCFC2-201ENST00000229330 MCM4P33991 863 aa16.86■□□□□ 0.29
HCFC2-201ENST00000229330 NOC3LQ8WTT2 800 aaKnown RBP16.86■□□□□ 0.29
HCFC2-201ENST00000229330 IFT57Q9NWB7 429 aa16.86■□□□□ 0.29
HCFC2-201ENST00000229330 CCAR2Q8N163 923 aaKnown RBP16.86■□□□□ 0.29
HCFC2-201ENST00000229330 LNPKQ9C0E8 428 aa16.85■□□□□ 0.29
HCFC2-201ENST00000229330 KIF3AQ9Y496 699 aa16.85■□□□□ 0.29
HCFC2-201ENST00000229330 TPM3P06753 285 aa16.85■□□□□ 0.29
HCFC2-201ENST00000229330 UQCRHLA0A096LP55 91 aa16.84■□□□□ 0.29
HCFC2-201ENST00000229330 UQCRHP07919 91 aa16.84■□□□□ 0.29
HCFC2-201ENST00000229330 CCDC34Q96HJ3 373 aa16.84■□□□□ 0.29
HCFC2-201ENST00000229330 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
HCFC2-201ENST00000229330 EID1Q9Y6B2 187 aa16.84■□□□□ 0.29
HCFC2-201ENST00000229330 INTS3Q68E01 1043 aaKnown RBP16.84■□□□□ 0.29
HCFC2-201ENST00000229330 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
HCFC2-201ENST00000229330 SF3A1Q15459 793 aaKnown RBP16.84■□□□□ 0.29
HCFC2-201ENST00000229330 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.29
HCFC2-201ENST00000229330 PDZRN3Q9UPQ7 1066 aa16.83■□□□□ 0.29
HCFC2-201ENST00000229330 MBD3O95983 291 aa16.83■□□□□ 0.28
HCFC2-201ENST00000229330 ADAMTS8Q9UP79 889 aa16.83■□□□□ 0.28
HCFC2-201ENST00000229330 H3BQV1 296 aa16.83■□□□□ 0.28
HCFC2-201ENST00000229330 IFFO2Q5TF58 517 aa16.83■□□□□ 0.28
HCFC2-201ENST00000229330 ARGLU1Q9NWB6 273 aaPredicted RBP16.82■□□□□ 0.28
HCFC2-201ENST00000229330 TULP1O00294 542 aaPredicted RBP16.82■□□□□ 0.28
HCFC2-201ENST00000229330 IFT140Q96RY7 1462 aa16.82■□□□□ 0.28
HCFC2-201ENST00000229330 ELL2O00472 640 aaPredicted RBP16.81■□□□□ 0.28
HCFC2-201ENST00000229330 CDC45O75419 566 aa16.81■□□□□ 0.28
HCFC2-201ENST00000229330 TSPY26PQ9H489 355 aa16.81■□□□□ 0.28
HCFC2-201ENST00000229330 HOMER1Q86YM7 354 aa16.8■□□□□ 0.28
HCFC2-201ENST00000229330 VGFO15240 615 aaPredicted RBP16.8■□□□□ 0.28
HCFC2-201ENST00000229330 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
HCFC2-201ENST00000229330 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
HCFC2-201ENST00000229330 PDE3AQ14432 1141 aa16.8■□□□□ 0.28
HCFC2-201ENST00000229330 MIA2Q96PC5 1412 aa16.8■□□□□ 0.28
HCFC2-201ENST00000229330 PRPF40AO75400 957 aaKnown RBP16.79■□□□□ 0.28
HCFC2-201ENST00000229330 EFCAB5A4FU69 1503 aa16.79■□□□□ 0.28
HCFC2-201ENST00000229330 ZSCAN30Q86W11 494 aa16.79■□□□□ 0.28
HCFC2-201ENST00000229330 CHMP3Q9Y3E7 222 aa16.79■□□□□ 0.28
HCFC2-201ENST00000229330 ANKRD50Q9ULJ7 1429 aa16.79■□□□□ 0.28
HCFC2-201ENST00000229330 ZMYND15Q9H091 742 aa16.79■□□□□ 0.28
HCFC2-201ENST00000229330 HDAC5Q9UQL6 1122 aa16.79■□□□□ 0.28
HCFC2-201ENST00000229330 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
HCFC2-201ENST00000229330 PDCL3Q9H2J4 239 aa16.78■□□□□ 0.28
HCFC2-201ENST00000229330 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
HCFC2-201ENST00000229330 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.28
HCFC2-201ENST00000229330 SASS6Q6UVJ0 657 aa16.77■□□□□ 0.28
HCFC2-201ENST00000229330 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
HCFC2-201ENST00000229330 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.27
HCFC2-201ENST00000229330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
HCFC2-201ENST00000229330 MNS1Q8NEH6 495 aa16.76■□□□□ 0.27
HCFC2-201ENST00000229330 BICD2Q8TD16 824 aa16.76■□□□□ 0.27
HCFC2-201ENST00000229330 ANO2Q9NQ90 1003 aa16.76■□□□□ 0.27
HCFC2-201ENST00000229330 API5Q9BZZ5 524 aaKnown RBP16.76■□□□□ 0.27
HCFC2-201ENST00000229330 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
HCFC2-201ENST00000229330 CIZ1Q9ULV3 898 aaPredicted RBP16.75■□□□□ 0.27
HCFC2-201ENST00000229330 NUTM2FA1L443 756 aa16.75■□□□□ 0.27
HCFC2-201ENST00000229330 NGDNQ8NEJ9 315 aaKnown RBP16.75■□□□□ 0.27
HCFC2-201ENST00000229330 TPD52L1Q16890 204 aaPredicted RBP16.75■□□□□ 0.27
HCFC2-201ENST00000229330 SYNJ2O15056 1496 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms