RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 PPP1R15AO75807 674 aaPredicted RBP15.32■□□□□ 0.04
CDCA3-201ENST00000229265 RBM33Q96EV2 1170 aaKnown RBP15.32■□□□□ 0.04
CDCA3-201ENST00000229265 KDM5AP29375 1690 aaKnown RBP15.32■□□□□ 0.04
CDCA3-201ENST00000229265 NUTM2DQ5VT03 806 aaPredicted RBP15.31■□□□□ 0.04
CDCA3-201ENST00000229265 TXNDC2Q86VQ3 553 aa15.31■□□□□ 0.04
CDCA3-201ENST00000229265 KANK1Q14678 1352 aa15.31■□□□□ 0.04
CDCA3-201ENST00000229265 IQSEC2Q5JU85 1478 aa15.31■□□□□ 0.04
CDCA3-201ENST00000229265 MPHOSPH9Q99550 1183 aa15.29■□□□□ 0.04
CDCA3-201ENST00000229265 NUP155O75694 1391 aa15.28■□□□□ 0.04
CDCA3-201ENST00000229265 UBAP1LF5GYI3 381 aa15.28■□□□□ 0.04
CDCA3-201ENST00000229265 SLC26A8Q96RN1 970 aa15.28■□□□□ 0.04
CDCA3-201ENST00000229265 CPS1P31327 1500 aa15.27■□□□□ 0.04
CDCA3-201ENST00000229265 RPRD2Q5VT52 1461 aaKnown RBP15.27■□□□□ 0.04
CDCA3-201ENST00000229265 CLTCL1P53675 1640 aa15.27■□□□□ 0.03
CDCA3-201ENST00000229265 SPHKAPQ2M3C7 1700 aa15.26■□□□□ 0.03
CDCA3-201ENST00000229265 ILDR2Q71H61 639 aa15.26■□□□□ 0.03
CDCA3-201ENST00000229265 TRIM52Q96A61 297 aa15.26■□□□□ 0.03
CDCA3-201ENST00000229265 NRXN3Q9Y4C0 1643 aa15.25■□□□□ 0.03
CDCA3-201ENST00000229265 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
CDCA3-201ENST00000229265 ADAMTS13Q76LX8 1427 aa15.24■□□□□ 0.03
CDCA3-201ENST00000229265 RIMS2Q9UQ26 1411 aa15.24■□□□□ 0.03
CDCA3-201ENST00000229265 HSPA1LP34931 641 aa15.23■□□□□ 0.03
CDCA3-201ENST00000229265 PIP4K2BP78356 416 aa15.22■□□□□ 0.03
CDCA3-201ENST00000229265 NEUROD1Q13562 356 aa15.22■□□□□ 0.03
CDCA3-201ENST00000229265 NWD1Q149M9 1564 aa15.22■□□□□ 0.03
CDCA3-201ENST00000229265 TONSLQ96HA7 1378 aa15.22■□□□□ 0.03
CDCA3-201ENST00000229265 CHD2O14647 1828 aaKnown RBP15.22■□□□□ 0.03
CDCA3-201ENST00000229265 PTPRUQ92729 1446 aa15.21■□□□□ 0.03
CDCA3-201ENST00000229265 FOXD1Q16676 465 aa15.21■□□□□ 0.03
CDCA3-201ENST00000229265 CHGAP10645 457 aaKnown RBP15.18■□□□□ 0.02
CDCA3-201ENST00000229265 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
CDCA3-201ENST00000229265 SLC52A1Q9NWF4 448 aa15.18■□□□□ 0.02
CDCA3-201ENST00000229265 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
CDCA3-201ENST00000229265 ANKRD30BQ9BXX2 1392 aa15.17■□□□□ 0.02
CDCA3-201ENST00000229265 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
CDCA3-201ENST00000229265 NEXMIFQ5QGS0 1516 aa15.17■□□□□ 0.02
CDCA3-201ENST00000229265 PLEKHG1Q9ULL1 1385 aa15.16■□□□□ 0.02
CDCA3-201ENST00000229265 TRPM2O94759 1503 aa15.16■□□□□ 0.02
CDCA3-201ENST00000229265 SETD1AO15047 1707 aaKnown RBP15.14■□□□□ 0.01
CDCA3-201ENST00000229265 EID1Q9Y6B2 187 aa15.14■□□□□ 0.01
CDCA3-201ENST00000229265 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
CDCA3-201ENST00000229265 KCNA6P17658 529 aa15.13■□□□□ 0.01
CDCA3-201ENST00000229265 METP08581 1390 aa15.11■□□□□ 0.01
CDCA3-201ENST00000229265 XRN1Q8IZH2 1706 aaKnown RBP15.11■□□□□ 0.01
CDCA3-201ENST00000229265 MED1Q15648 1581 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-201ENST00000229265 DISP3Q9P2K9 1392 aa15.11■□□□□ 0.01
CDCA3-201ENST00000229265 ROBO1Q9Y6N7 1651 aa15.09■□□□□ 0.01
CDCA3-201ENST00000229265 SETBP1Q9Y6X0 1596 aa15.09■□□□□ 0.01
CDCA3-201ENST00000229265 PPLO60437 1756 aa15.08■□□□□ 0
CDCA3-201ENST00000229265 KIF1BO60333 1816 aa15.08■□□□□ 0
CDCA3-201ENST00000229265 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.07■□□□□ 0
CDCA3-201ENST00000229265 PROSER2Q86WR7 435 aaPredicted RBP15.07■□□□□ 0
CDCA3-201ENST00000229265 NKTRP30414 1462 aaKnown RBP15.07■□□□□ 0
CDCA3-201ENST00000229265 TOM1O60784 492 aa15.06■□□□□ 0
CDCA3-201ENST00000229265 TBX22Q9Y458 520 aa15.06■□□□□ 0
CDCA3-201ENST00000229265 BCANQ96GW7 911 aa15.05■□□□□ -0
CDCA3-201ENST00000229265 IFT172Q9UG01 1749 aa15.05■□□□□ -0
CDCA3-201ENST00000229265 ASXL1Q8IXJ9 1541 aa15.04■□□□□ -0
CDCA3-201ENST00000229265 L3MBTL2Q969R5 705 aa15.04■□□□□ -0
CDCA3-201ENST00000229265 NALCNQ8IZF0 1738 aa15.03■□□□□ -0
CDCA3-201ENST00000229265 DIP2AQ14689 1571 aa15.03■□□□□ -0
CDCA3-201ENST00000229265 SPATA31E1Q6ZUB1 1445 aa15.03■□□□□ -0
CDCA3-201ENST00000229265 STAC3Q96MF2 364 aa15.03■□□□□ -0
CDCA3-201ENST00000229265 RGS17Q9UGC6 210 aaPredicted RBP15.02■□□□□ -0
CDCA3-201ENST00000229265 ADGRF5Q8IZF2 1346 aa15.01□□□□□ -0.01
CDCA3-201ENST00000229265 AMOTL2Q9Y2J4 779 aa15.01□□□□□ -0.01
CDCA3-201ENST00000229265 CENPBP07199 599 aaPredicted RBP15□□□□□ -0.01
CDCA3-201ENST00000229265 ZNF326Q5BKZ1 582 aaKnown RBP15□□□□□ -0.01
CDCA3-201ENST00000229265 MIER1Q8N108 512 aa15□□□□□ -0.01
CDCA3-201ENST00000229265 FAM135BQ49AJ0 1406 aa15□□□□□ -0.01
CDCA3-201ENST00000229265 COL16A1Q07092 1604 aaPredicted RBP14.99□□□□□ -0.01
CDCA3-201ENST00000229265 EIF4G2P78344 907 aaKnown RBP eCLIP14.99□□□□□ -0.01
CDCA3-201ENST00000229265 ROBO2Q9HCK4 1378 aa14.98□□□□□ -0.01
CDCA3-201ENST00000229265 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.98□□□□□ -0.01
CDCA3-201ENST00000229265 DDX17Q92841 729 aaKnown RBP14.97□□□□□ -0.01
CDCA3-201ENST00000229265 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
CDCA3-201ENST00000229265 SLAIN2Q9P270 581 aa14.95□□□□□ -0.02
CDCA3-201ENST00000229265 LRP6O75581 1613 aa14.95□□□□□ -0.02
CDCA3-201ENST00000229265 RGL3Q3MIN7 710 aa14.94□□□□□ -0.02
CDCA3-201ENST00000229265 PIK3R4Q99570 1358 aa14.94□□□□□ -0.02
CDCA3-201ENST00000229265 MST1RQ04912 1400 aa14.93□□□□□ -0.02
CDCA3-201ENST00000229265 MSH6P52701 1360 aa14.93□□□□□ -0.02
CDCA3-201ENST00000229265 PLEKHH1Q9ULM0 1364 aa14.93□□□□□ -0.02
CDCA3-201ENST00000229265 TMEM132EQ6IEE7 984 aa14.9□□□□□ -0.02
CDCA3-201ENST00000229265 BRINP3Q76B58 766 aa14.9□□□□□ -0.02
CDCA3-201ENST00000229265 NHSL1Q5SYE7 1610 aa14.89□□□□□ -0.03
CDCA3-201ENST00000229265 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
CDCA3-201ENST00000229265 CCER2I3L3R5 266 aa14.89□□□□□ -0.03
CDCA3-201ENST00000229265 HSPA5P11021 654 aaKnown RBP14.88□□□□□ -0.03
CDCA3-201ENST00000229265 HDGFP51858 240 aaKnown RBP14.88□□□□□ -0.03
CDCA3-201ENST00000229265 CCDC144AA2RUR9 1427 aa14.88□□□□□ -0.03
CDCA3-201ENST00000229265 PIK3C2GO75747 1445 aa14.88□□□□□ -0.03
CDCA3-201ENST00000229265 ADGRL3Q9HAR2 1447 aa14.88□□□□□ -0.03
CDCA3-201ENST00000229265 NCOA3Q9Y6Q9 1424 aa14.88□□□□□ -0.03
CDCA3-201ENST00000229265 NRXN1Q9ULB1 1477 aa14.88□□□□□ -0.03
CDCA3-201ENST00000229265 PRAG1Q86YV5 1406 aa14.87□□□□□ -0.03
CDCA3-201ENST00000229265 DDX10Q13206 875 aaKnown RBP14.87□□□□□ -0.03
CDCA3-201ENST00000229265 NBPF8Q3BBV2 869 aa14.87□□□□□ -0.03
CDCA3-201ENST00000229265 POTEAQ6S8J7 498 aa14.87□□□□□ -0.03
CDCA3-201ENST00000229265 WAPLQ7Z5K2 1190 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms