RNA–Protein interactions for RNA: ENST00000229022.7

VDR-201, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VDR, Length 4,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-201ENST00000229022 HFM1A2PYH4 1435 aa16.05■□□□□ 0.16
VDR-201ENST00000229022 NEXNQ0ZGT2 675 aa16.05■□□□□ 0.16
VDR-201ENST00000229022 EFCAB5A4FU69 1503 aa16.05■□□□□ 0.16
VDR-201ENST00000229022 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
VDR-201ENST00000229022 RILPL2Q969X0 211 aa16.03■□□□□ 0.16
VDR-201ENST00000229022 DDX49Q9Y6V7 483 aaKnown RBP16.03■□□□□ 0.16
VDR-201ENST00000229022 GSE1Q14687 1217 aa16.03■□□□□ 0.16
VDR-201ENST00000229022 PRXQ9BXM0 1461 aa16.02■□□□□ 0.16
VDR-201ENST00000229022 SF3A1Q15459 793 aaKnown RBP16.02■□□□□ 0.15
VDR-201ENST00000229022 FOXD4L1Q9NU39 408 aa16.02■□□□□ 0.15
VDR-201ENST00000229022 DIAPH3Q9NSV4 1193 aa16.01■□□□□ 0.15
VDR-201ENST00000229022 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
VDR-201ENST00000229022 NOL8Q76FK4 1167 aaKnown RBP16.01■□□□□ 0.15
VDR-201ENST00000229022 AQRO60306 1485 aaKnown RBP eCLIP16.01■□□□□ 0.15
VDR-201ENST00000229022 CHMP5Q9NZZ3 219 aa16■□□□□ 0.15
VDR-201ENST00000229022 DDX58O95786 925 aaKnown RBP16■□□□□ 0.15
VDR-201ENST00000229022 HSP90AB4PQ58FF6 505 aa16■□□□□ 0.15
VDR-201ENST00000229022 C9orf78Q9NZ63 289 aaPredicted RBP15.99■□□□□ 0.15
VDR-201ENST00000229022 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
VDR-201ENST00000229022 CPLX2Q6PUV4 134 aaKnown RBP15.99■□□□□ 0.15
VDR-201ENST00000229022 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
VDR-201ENST00000229022 TTC5Q8N0Z6 440 aa15.98■□□□□ 0.15
VDR-201ENST00000229022 FAM184AQ8NB25 1140 aa15.98■□□□□ 0.15
VDR-201ENST00000229022 H3BQV1 296 aa15.98■□□□□ 0.15
VDR-201ENST00000229022 IFFO2Q5TF58 517 aa15.98■□□□□ 0.15
VDR-201ENST00000229022 CYB5RLQ6IPT4 315 aa15.98■□□□□ 0.15
VDR-201ENST00000229022 CCDC9Q9Y3X0 531 aaKnown RBP15.97■□□□□ 0.15
VDR-201ENST00000229022 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
VDR-201ENST00000229022 SCAPERQ9BY12 1400 aa15.97■□□□□ 0.15
VDR-201ENST00000229022 PLEKHH2Q8IVE3 1493 aa15.96■□□□□ 0.15
VDR-201ENST00000229022 TOMM22Q9NS69 142 aa15.96■□□□□ 0.15
VDR-201ENST00000229022 EHBP1L1Q8N3D4 1523 aa15.96■□□□□ 0.15
VDR-201ENST00000229022 FRAT2O75474 233 aaPredicted RBP15.96■□□□□ 0.14
VDR-201ENST00000229022 INTS3Q68E01 1043 aaKnown RBP15.96■□□□□ 0.14
VDR-201ENST00000229022 RASSF8Q8NHQ8 419 aa15.96■□□□□ 0.14
VDR-201ENST00000229022 RNF20Q5VTR2 975 aa15.95■□□□□ 0.14
VDR-201ENST00000229022 KIAA1107Q9UPP5 1409 aa15.95■□□□□ 0.14
VDR-201ENST00000229022 FKBP5Q13451 457 aaPredicted RBP15.95■□□□□ 0.14
VDR-201ENST00000229022 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
VDR-201ENST00000229022 NUCB2P80303 420 aa15.95■□□□□ 0.14
VDR-201ENST00000229022 ADAMTS8Q9UP79 889 aa15.94■□□□□ 0.14
VDR-201ENST00000229022 IFIT2P09913 472 aaKnown RBP15.94■□□□□ 0.14
VDR-201ENST00000229022 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
VDR-201ENST00000229022 SLC4A3P48751 1232 aa15.94■□□□□ 0.14
VDR-201ENST00000229022 CLSTN1O94985 981 aa15.93■□□□□ 0.14
VDR-201ENST00000229022 GOLGA6L19H0YKK7 550 aa15.93■□□□□ 0.14
VDR-201ENST00000229022 ARHGAP5Q13017 1502 aa15.92■□□□□ 0.14
VDR-201ENST00000229022 EIF2S2P20042 333 aaKnown RBP15.92■□□□□ 0.14
VDR-201ENST00000229022 SYNE3Q6ZMZ3 975 aa15.92■□□□□ 0.14
VDR-201ENST00000229022 PSME1Q06323 249 aa15.92■□□□□ 0.14
VDR-201ENST00000229022 TROQ12816 1431 aaPredicted RBP15.92■□□□□ 0.14
VDR-201ENST00000229022 TOP2BQ02880 1626 aa15.92■□□□□ 0.14
VDR-201ENST00000229022 MTHFSP49914 203 aa15.92■□□□□ 0.14
VDR-201ENST00000229022 G3BP1Q13283 466 aaKnown RBP eCLIP15.91■□□□□ 0.14
VDR-201ENST00000229022 PDE3AQ14432 1141 aa15.91■□□□□ 0.14
VDR-201ENST00000229022 BECN2A8MW95 431 aa15.91■□□□□ 0.14
VDR-201ENST00000229022 TCP11L2Q8N4U5 519 aa15.91■□□□□ 0.14
VDR-201ENST00000229022 GGNBP2Q9H3C7 697 aa15.91■□□□□ 0.14
VDR-201ENST00000229022 TSPYL4Q9UJ04 414 aa15.91■□□□□ 0.14
VDR-201ENST00000229022 ERC2O15083 957 aa15.91■□□□□ 0.14
VDR-201ENST00000229022 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
VDR-201ENST00000229022 AKAP17AQ02040 695 aaKnown RBP15.91■□□□□ 0.14
VDR-201ENST00000229022 TPM3P06753 285 aa15.91■□□□□ 0.14
VDR-201ENST00000229022 AFAP1Q8N556 730 aa15.9■□□□□ 0.14
VDR-201ENST00000229022 C22orf23Q9BZE7 217 aa15.9■□□□□ 0.14
VDR-201ENST00000229022 FOXD4L5Q5VV16 416 aaPredicted RBP15.9■□□□□ 0.14
VDR-201ENST00000229022 FOXD4L4Q8WXT5 416 aaPredicted RBP15.9■□□□□ 0.14
VDR-201ENST00000229022 C9orf84Q5VXU9 1444 aa15.9■□□□□ 0.14
VDR-201ENST00000229022 CFAP70Q5T0N1 1121 aa15.9■□□□□ 0.14
VDR-201ENST00000229022 G3V3G9 751 aa15.89■□□□□ 0.13
VDR-201ENST00000229022 DCAF8Q5TAQ9 597 aa15.89■□□□□ 0.13
VDR-201ENST00000229022 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
VDR-201ENST00000229022 ANO2Q9NQ90 1003 aa15.89■□□□□ 0.13
VDR-201ENST00000229022 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
VDR-201ENST00000229022 EVA1CP58658 441 aa15.89■□□□□ 0.13
VDR-201ENST00000229022 FAM69CQ0P6D2 419 aa15.89■□□□□ 0.13
VDR-201ENST00000229022 LNPKQ9C0E8 428 aa15.88■□□□□ 0.13
VDR-201ENST00000229022 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
VDR-201ENST00000229022 CT47B1P0C2W7 299 aaPredicted RBP15.88■□□□□ 0.13
VDR-201ENST00000229022 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
VDR-201ENST00000229022 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
VDR-201ENST00000229022 CDC45O75419 566 aa15.87■□□□□ 0.13
VDR-201ENST00000229022 GNAI3P08754 354 aa15.87■□□□□ 0.13
VDR-201ENST00000229022 RAPGEF4Q8WZA2 1011 aa15.87■□□□□ 0.13
VDR-201ENST00000229022 PRG4Q92954 1404 aaPredicted RBP15.87■□□□□ 0.13
VDR-201ENST00000229022 PANK1Q8TE04 598 aa15.86■□□□□ 0.13
VDR-201ENST00000229022 TMEM132EQ6IEE7 984 aa15.86■□□□□ 0.13
VDR-201ENST00000229022 GOLGA6L1Q8N7Z2 621 aa15.86■□□□□ 0.13
VDR-201ENST00000229022 NINLQ9Y2I6 1382 aa15.86■□□□□ 0.13
VDR-201ENST00000229022 HMOX1P09601 288 aa15.86■□□□□ 0.13
VDR-201ENST00000229022 TRDNQ13061 729 aa15.86■□□□□ 0.13
VDR-201ENST00000229022 TRIM29Q14134 588 aa15.86■□□□□ 0.13
VDR-201ENST00000229022 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
VDR-201ENST00000229022 TSR1Q2NL82 804 aaKnown RBP15.85■□□□□ 0.13
VDR-201ENST00000229022 GAS2L2Q8NHY3 880 aa15.85■□□□□ 0.13
VDR-201ENST00000229022 SLC52A1Q9NWF4 448 aa15.85■□□□□ 0.13
VDR-201ENST00000229022 CPLX1O14810 134 aa15.85■□□□□ 0.13
VDR-201ENST00000229022 MARCH6O60337 910 aa15.85■□□□□ 0.13
VDR-201ENST00000229022 TPM1P09493 284 aa15.85■□□□□ 0.13
VDR-201ENST00000229022 PNISRQ8TF01 805 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms