RNA–Protein interactions for RNA: ENST00000227163.8

SPI1-201, Transcript of Spi-1 proto-oncogene, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPI1, Length 1,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-201ENST00000227163 SLC26A8Q96RN1 970 aa32.83■■■□□ 2.85
SPI1-201ENST00000227163 E9PCH4 1651 aa32.82■■■□□ 2.84
SPI1-201ENST00000227163 PPP1R15AO75807 674 aaPredicted RBP32.82■■■□□ 2.84
SPI1-201ENST00000227163 TMEM94Q12767 1356 aa32.82■■■□□ 2.84
SPI1-201ENST00000227163 TMEM131LA2VDJ0 1609 aa32.8■■■□□ 2.84
SPI1-201ENST00000227163 ZFYVE9O95405 1425 aa32.8■■■□□ 2.84
SPI1-201ENST00000227163 KCNA6P17658 529 aa32.8■■■□□ 2.84
SPI1-201ENST00000227163 RIMS2Q9UQ26 1411 aa32.79■■■□□ 2.84
SPI1-201ENST00000227163 PHF23Q9BUL5 403 aaPredicted RBP32.78■■■□□ 2.84
SPI1-201ENST00000227163 ITGAEP38570 1179 aa32.77■■■□□ 2.84
SPI1-201ENST00000227163 PLEKHG1Q9ULL1 1385 aa32.76■■■□□ 2.83
SPI1-201ENST00000227163 HDGFP51858 240 aaKnown RBP32.74■■■□□ 2.83
SPI1-201ENST00000227163 PROSER2Q86WR7 435 aaPredicted RBP32.73■■■□□ 2.83
SPI1-201ENST00000227163 NUP155O75694 1391 aa32.72■■■□□ 2.83
SPI1-201ENST00000227163 CHGAP10645 457 aaKnown RBP32.72■■■□□ 2.83
SPI1-201ENST00000227163 PPARGC1BQ86YN6 1023 aaKnown RBP32.69■■■□□ 2.82
SPI1-201ENST00000227163 MSH6P52701 1360 aa32.68■■■□□ 2.82
SPI1-201ENST00000227163 FAM135BQ49AJ0 1406 aa32.68■■■□□ 2.82
SPI1-201ENST00000227163 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.67■■■□□ 2.82
SPI1-201ENST00000227163 DIP2AQ14689 1571 aa32.66■■■□□ 2.82
SPI1-201ENST00000227163 ROBO1Q9Y6N7 1651 aa32.66■■■□□ 2.82
SPI1-201ENST00000227163 CHD2O14647 1828 aaKnown RBP32.65■■■□□ 2.82
SPI1-201ENST00000227163 RBM33Q96EV2 1170 aaKnown RBP32.64■■■□□ 2.82
SPI1-201ENST00000227163 SPHKAPQ2M3C7 1700 aa32.61■■■□□ 2.81
SPI1-201ENST00000227163 NUTM2DQ5VT03 806 aaPredicted RBP32.56■■■□□ 2.8
SPI1-201ENST00000227163 ADAMTS13Q76LX8 1427 aa32.55■■■□□ 2.8
SPI1-201ENST00000227163 TBX22Q9Y458 520 aa32.55■■■□□ 2.8
SPI1-201ENST00000227163 TRPM2O94759 1503 aa32.55■■■□□ 2.8
SPI1-201ENST00000227163 RRBP1Q9P2E9 1410 aaKnown RBP32.53■■■□□ 2.8
SPI1-201ENST00000227163 C14orf37Q86TY3 774 aa32.52■■■□□ 2.8
SPI1-201ENST00000227163 PIK3R4Q99570 1358 aa32.52■■■□□ 2.8
SPI1-201ENST00000227163 NCOA3Q9Y6Q9 1424 aa32.49■■■□□ 2.79
SPI1-201ENST00000227163 PHLPP1O60346 1717 aa32.48■■■□□ 2.79
SPI1-201ENST00000227163 SLAIN2Q9P270 581 aa32.46■■■□□ 2.79
SPI1-201ENST00000227163 SETBP1Q9Y6X0 1596 aa32.44■■■□□ 2.78
SPI1-201ENST00000227163 ZNF326Q5BKZ1 582 aaKnown RBP32.43■■■□□ 2.78
SPI1-201ENST00000227163 NAIPQ13075 1403 aa32.42■■■□□ 2.78
SPI1-201ENST00000227163 CLTCL1P53675 1640 aa32.41■■■□□ 2.78
SPI1-201ENST00000227163 NRXN3Q9Y4C0 1643 aa32.41■■■□□ 2.78
SPI1-201ENST00000227163 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.4■■■□□ 2.78
SPI1-201ENST00000227163 XRN1Q8IZH2 1706 aaKnown RBP32.38■■■□□ 2.77
SPI1-201ENST00000227163 ATF3P18847 181 aa32.37■■■□□ 2.77
SPI1-201ENST00000227163 CADPS2Q86UW7 1296 aa32.37■■■□□ 2.77
SPI1-201ENST00000227163 COL16A1Q07092 1604 aaPredicted RBP32.36■■■□□ 2.77
SPI1-201ENST00000227163 KIF1BO60333 1816 aa32.35■■■□□ 2.77
SPI1-201ENST00000227163 JCADQ9P266 1359 aa32.35■■■□□ 2.77
SPI1-201ENST00000227163 AMOTL2Q9Y2J4 779 aa32.35■■■□□ 2.77
SPI1-201ENST00000227163 PTPRUQ92729 1446 aa32.34■■■□□ 2.77
SPI1-201ENST00000227163 C19orf44Q9H6X5 657 aa32.34■■■□□ 2.77
SPI1-201ENST00000227163 NEXMIFQ5QGS0 1516 aa32.34■■■□□ 2.77
SPI1-201ENST00000227163 HFM1A2PYH4 1435 aa32.34■■■□□ 2.77
SPI1-201ENST00000227163 RGS17Q9UGC6 210 aaPredicted RBP32.31■■■□□ 2.76
SPI1-201ENST00000227163 DCCP43146 1447 aa32.31■■■□□ 2.76
SPI1-201ENST00000227163 AHDC1Q5TGY3 1603 aaPredicted RBP32.3■■■□□ 2.76
SPI1-201ENST00000227163 TRIM52Q96A61 297 aa32.28■■■□□ 2.76
SPI1-201ENST00000227163 METP08581 1390 aa32.23■■■□□ 2.75
SPI1-201ENST00000227163 SHPRHQ149N8 1683 aa32.21■■■□□ 2.75
SPI1-201ENST00000227163 ASXL1Q8IXJ9 1541 aa32.2■■■□□ 2.74
SPI1-201ENST00000227163 SLC4A1APQ9BWU0 796 aaKnown RBP32.19■■■□□ 2.74
SPI1-201ENST00000227163 ADGRL3Q9HAR2 1447 aa32.18■■■□□ 2.74
SPI1-201ENST00000227163 SPATA31A6Q5VVP1 1343 aa32.18■■■□□ 2.74
SPI1-201ENST00000227163 NALCNQ8IZF0 1738 aa32.17■■■□□ 2.74
SPI1-201ENST00000227163 POTEAQ6S8J7 498 aa32.16■■■□□ 2.74
SPI1-201ENST00000227163 BRINP3Q76B58 766 aa32.16■■■□□ 2.74
SPI1-201ENST00000227163 MEX3CQ5U5Q3 659 aaKnown RBP32.15■■■□□ 2.74
SPI1-201ENST00000227163 MST1RQ04912 1400 aa32.15■■■□□ 2.74
SPI1-201ENST00000227163 LRP6O75581 1613 aa32.15■■■□□ 2.74
SPI1-201ENST00000227163 PTCH1Q13635 1447 aa32.12■■■□□ 2.73
SPI1-201ENST00000227163 SETD1AO15047 1707 aaKnown RBP32.12■■■□□ 2.73
SPI1-201ENST00000227163 NHSL1Q5SYE7 1610 aa32.11■■■□□ 2.73
SPI1-201ENST00000227163 VGFO15240 615 aaPredicted RBP32.11■■■□□ 2.73
SPI1-201ENST00000227163 PPLO60437 1756 aa32.1■■■□□ 2.73
SPI1-201ENST00000227163 RPGRIP1LQ68CZ1 1315 aa32.08■■■□□ 2.73
SPI1-201ENST00000227163 CCDC144AA2RUR9 1427 aa32.04■■■□□ 2.72
SPI1-201ENST00000227163 PRAG1Q86YV5 1406 aa32.02■■■□□ 2.72
SPI1-201ENST00000227163 SETD5Q9C0A6 1442 aa32.02■■■□□ 2.72
SPI1-201ENST00000227163 ROBO2Q9HCK4 1378 aa32■■■□□ 2.71
SPI1-201ENST00000227163 ZNF772Q68DY9 489 aaPredicted RBP32■■■□□ 2.71
SPI1-201ENST00000227163 NUTM2BA6NNL0 878 aaPredicted RBP31.98■■■□□ 2.71
SPI1-201ENST00000227163 NUTM2EB1AL46 878 aaPredicted RBP31.98■■■□□ 2.71
SPI1-201ENST00000227163 FOXD1Q16676 465 aa31.98■■■□□ 2.71
SPI1-201ENST00000227163 NUTM2AQ8IVF1 878 aaPredicted RBP31.98■■■□□ 2.71
SPI1-201ENST00000227163 C1orf167Q5SNV9 1468 aa31.97■■■□□ 2.71
SPI1-201ENST00000227163 LRRC59Q96AG4 307 aaKnown RBP31.94■■■□□ 2.7
SPI1-201ENST00000227163 IFT172Q9UG01 1749 aa31.91■■■□□ 2.7
SPI1-201ENST00000227163 PNPLA6Q8IY17 1366 aa31.9■■■□□ 2.7
SPI1-201ENST00000227163 CDC42BPGQ6DT37 1551 aa31.9■■■□□ 2.7
SPI1-201ENST00000227163 LAMC1P11047 1609 aa31.89■■■□□ 2.7
SPI1-201ENST00000227163 DDX17Q92841 729 aaKnown RBP31.89■■■□□ 2.7
SPI1-201ENST00000227163 SPATA31E1Q6ZUB1 1445 aa31.89■■■□□ 2.7
SPI1-201ENST00000227163 MPHOSPH9Q99550 1183 aa31.88■■■□□ 2.69
SPI1-201ENST00000227163 ANKRD30BQ9BXX2 1392 aa31.88■■■□□ 2.69
SPI1-201ENST00000227163 RGL3Q3MIN7 710 aa31.85■■■□□ 2.69
SPI1-201ENST00000227163 AFF2P51816 1311 aa31.84■■■□□ 2.69
SPI1-201ENST00000227163 ADGRF5Q8IZF2 1346 aa31.83■■■□□ 2.69
SPI1-201ENST00000227163 ACIN1Q9UKV3 1341 aaKnown RBP31.83■■■□□ 2.69
SPI1-201ENST00000227163 KNDC1Q76NI1 1749 aa31.81■■■□□ 2.68
SPI1-201ENST00000227163 TECPR2O15040 1411 aa31.81■■■□□ 2.68
SPI1-201ENST00000227163 RXRBP28702 533 aa31.8■■■□□ 2.68
SPI1-201ENST00000227163 C8orf37Q96NL8 207 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms