RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 HDGFP51858 240 aaKnown RBP23.64■■□□□ 1.38
CHMP5-201ENST00000223500 THEMISQ8N1K5 641 aaPredicted RBP23.64■■□□□ 1.38
CHMP5-201ENST00000223500 MYOM2P54296 1465 aa23.63■■□□□ 1.37
CHMP5-201ENST00000223500 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
CHMP5-201ENST00000223500 NEXMIFQ5QGS0 1516 aa23.63■■□□□ 1.37
CHMP5-201ENST00000223500 ZNF142P52746 1687 aaPredicted RBP23.62■■□□□ 1.37
CHMP5-201ENST00000223500 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.62■■□□□ 1.37
CHMP5-201ENST00000223500 PRAG1Q86YV5 1406 aa23.6■■□□□ 1.37
CHMP5-201ENST00000223500 RIMS2Q9UQ26 1411 aa23.6■■□□□ 1.37
CHMP5-201ENST00000223500 NBPF8Q3BBV2 869 aa23.6■■□□□ 1.37
CHMP5-201ENST00000223500 TMEM2Q9UHN6 1383 aa23.59■■□□□ 1.37
CHMP5-201ENST00000223500 ZFYVE9O95405 1425 aa23.59■■□□□ 1.37
CHMP5-201ENST00000223500 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
CHMP5-201ENST00000223500 EID1Q9Y6B2 187 aa23.56■■□□□ 1.36
CHMP5-201ENST00000223500 NUTM2DQ5VT03 806 aaPredicted RBP23.55■■□□□ 1.36
CHMP5-201ENST00000223500 SLIT1O75093 1534 aa23.55■■□□□ 1.36
CHMP5-201ENST00000223500 NRXN1Q9ULB1 1477 aa23.54■■□□□ 1.36
CHMP5-201ENST00000223500 ARHGAP23Q9P227 1491 aa23.53■■□□□ 1.36
CHMP5-201ENST00000223500 RALGAPBQ86X10 1494 aa23.52■■□□□ 1.36
CHMP5-201ENST00000223500 TRPM1Q7Z4N2 1603 aa23.51■■□□□ 1.35
CHMP5-201ENST00000223500 TXNDC2Q86VQ3 553 aa23.51■■□□□ 1.35
CHMP5-201ENST00000223500 KIAA1210Q9ULL0 1709 aa23.51■■□□□ 1.35
CHMP5-201ENST00000223500 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
CHMP5-201ENST00000223500 ROCK2O75116 1388 aaKnown RBP23.48■■□□□ 1.35
CHMP5-201ENST00000223500 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
CHMP5-201ENST00000223500 LTKP29376 864 aa23.46■■□□□ 1.35
CHMP5-201ENST00000223500 C14orf93Q9H972 538 aaKnown RBP23.46■■□□□ 1.35
CHMP5-201ENST00000223500 SCAF11Q99590 1463 aaKnown RBP23.45■■□□□ 1.35
CHMP5-201ENST00000223500 LAMC1P11047 1609 aa23.45■■□□□ 1.35
CHMP5-201ENST00000223500 CFAP70Q5T0N1 1121 aa23.45■■□□□ 1.34
CHMP5-201ENST00000223500 BCANQ96GW7 911 aa23.44■■□□□ 1.34
CHMP5-201ENST00000223500 CARD11Q9BXL7 1154 aa23.44■■□□□ 1.34
CHMP5-201ENST00000223500 PLEKHG1Q9ULL1 1385 aa23.44■■□□□ 1.34
CHMP5-201ENST00000223500 NBPF1Q3BBV0 1214 aa23.43■■□□□ 1.34
CHMP5-201ENST00000223500 GPRASP1Q5JY77 1395 aa23.42■■□□□ 1.34
CHMP5-201ENST00000223500 SETBP1Q9Y6X0 1596 aa23.41■■□□□ 1.34
CHMP5-201ENST00000223500 ALKQ9UM73 1620 aa23.39■■□□□ 1.34
CHMP5-201ENST00000223500 EIF4G2P78344 907 aaKnown RBP eCLIP23.39■■□□□ 1.34
CHMP5-201ENST00000223500 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.34
CHMP5-201ENST00000223500 LMTK3Q96Q04 1460 aa23.39■■□□□ 1.33
CHMP5-201ENST00000223500 IQGAP1P46940 1657 aa23.38■■□□□ 1.33
CHMP5-201ENST00000223500 POLR1AO95602 1720 aaPredicted RBP23.38■■□□□ 1.33
CHMP5-201ENST00000223500 NRXN3Q9Y4C0 1643 aa23.36■■□□□ 1.33
CHMP5-201ENST00000223500 USP47Q96K76 1375 aa23.34■■□□□ 1.33
CHMP5-201ENST00000223500 HSPA2P54652 639 aa23.33■■□□□ 1.33
CHMP5-201ENST00000223500 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.33
CHMP5-201ENST00000223500 ADGRB1O14514 1584 aa23.33■■□□□ 1.33
CHMP5-201ENST00000223500 SETD1AO15047 1707 aaKnown RBP23.33■■□□□ 1.32
CHMP5-201ENST00000223500 ADAMTS13Q76LX8 1427 aa23.33■■□□□ 1.32
CHMP5-201ENST00000223500 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
CHMP5-201ENST00000223500 DIP2AQ14689 1571 aa23.32■■□□□ 1.32
CHMP5-201ENST00000223500 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
CHMP5-201ENST00000223500 MED14O60244 1454 aa23.31■■□□□ 1.32
CHMP5-201ENST00000223500 NPHP4O75161 1426 aaPredicted RBP23.31■■□□□ 1.32
CHMP5-201ENST00000223500 HSPA5P11021 654 aaKnown RBP23.3■■□□□ 1.32
CHMP5-201ENST00000223500 SLC26A8Q96RN1 970 aa23.3■■□□□ 1.32
CHMP5-201ENST00000223500 EIF3AQ14152 1382 aaKnown RBP23.3■■□□□ 1.32
CHMP5-201ENST00000223500 ASXL1Q8IXJ9 1541 aa23.29■■□□□ 1.32
CHMP5-201ENST00000223500 YTHDC2Q9H6S0 1430 aaKnown RBP23.27■■□□□ 1.32
CHMP5-201ENST00000223500 ZNF316A6NFI3 1004 aaPredicted RBP23.27■■□□□ 1.32
CHMP5-201ENST00000223500 TRAK1Q9UPV9 953 aa23.26■■□□□ 1.31
CHMP5-201ENST00000223500 METP08581 1390 aa23.26■■□□□ 1.31
CHMP5-201ENST00000223500 LRPPRCP42704 1394 aaKnown RBP23.25■■□□□ 1.31
CHMP5-201ENST00000223500 PIK3R4Q99570 1358 aa23.24■■□□□ 1.31
CHMP5-201ENST00000223500 STK26Q9P289 416 aa23.24■■□□□ 1.31
CHMP5-201ENST00000223500 ST20-MTHFSA0A0A6YYL1 179 aa23.24■■□□□ 1.31
CHMP5-201ENST00000223500 HIRIP3Q9BW71 556 aaPredicted RBP23.24■■□□□ 1.31
CHMP5-201ENST00000223500 ABCC11Q96J66 1382 aa23.22■■□□□ 1.31
CHMP5-201ENST00000223500 STRCQ7RTU9 1775 aa23.21■■□□□ 1.31
CHMP5-201ENST00000223500 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
CHMP5-201ENST00000223500 ARHGEF28Q8N1W1 1705 aaKnown RBP23.2■■□□□ 1.3
CHMP5-201ENST00000223500 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
CHMP5-201ENST00000223500 SLC24A1O60721 1099 aa23.19■■□□□ 1.3
CHMP5-201ENST00000223500 DLC1Q96QB1 1528 aa23.19■■□□□ 1.3
CHMP5-201ENST00000223500 CENPJQ9HC77 1338 aaPredicted RBP23.19■■□□□ 1.3
CHMP5-201ENST00000223500 SIRT1Q96EB6 747 aa23.17■■□□□ 1.3
CHMP5-201ENST00000223500 TECPR2O15040 1411 aa23.17■■□□□ 1.3
CHMP5-201ENST00000223500 POGKQ9P215 609 aa23.17■■□□□ 1.3
CHMP5-201ENST00000223500 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
CHMP5-201ENST00000223500 CHD2O14647 1828 aaKnown RBP23.16■■□□□ 1.3
CHMP5-201ENST00000223500 DMRT2Q9Y5R5 561 aa23.16■■□□□ 1.3
CHMP5-201ENST00000223500 PTPRUQ92729 1446 aa23.15■■□□□ 1.3
CHMP5-201ENST00000223500 CPS1P31327 1500 aa23.13■■□□□ 1.29
CHMP5-201ENST00000223500 FAM135BQ49AJ0 1406 aa23.13■■□□□ 1.29
CHMP5-201ENST00000223500 PRAM1Q96QH2 718 aa23.13■■□□□ 1.29
CHMP5-201ENST00000223500 QRICH2Q9H0J4 1663 aa23.13■■□□□ 1.29
CHMP5-201ENST00000223500 TESK2Q96S53 571 aa23.12■■□□□ 1.29
CHMP5-201ENST00000223500 SBNO2Q9Y2G9 1366 aa23.12■■□□□ 1.29
CHMP5-201ENST00000223500 XRN1Q8IZH2 1706 aaKnown RBP23.12■■□□□ 1.29
CHMP5-201ENST00000223500 KCNA6P17658 529 aa23.11■■□□□ 1.29
CHMP5-201ENST00000223500 TMF1P82094 1093 aa23.11■■□□□ 1.29
CHMP5-201ENST00000223500 PTCH1Q13635 1447 aa23.1■■□□□ 1.29
CHMP5-201ENST00000223500 SAFB2Q14151 953 aaKnown RBP eCLIP23.08■■□□□ 1.29
CHMP5-201ENST00000223500 WAPLQ7Z5K2 1190 aa23.08■■□□□ 1.29
CHMP5-201ENST00000223500 ROBO2Q9HCK4 1378 aa23.08■■□□□ 1.28
CHMP5-201ENST00000223500 CDCA8Q53HL2 280 aa23.07■■□□□ 1.28
CHMP5-201ENST00000223500 NWD1Q149M9 1564 aa23.06■■□□□ 1.28
CHMP5-201ENST00000223500 PLEKHH1Q9ULM0 1364 aa23.04■■□□□ 1.28
CHMP5-201ENST00000223500 C11orf95C9JLR9 678 aaPredicted RBP23.04■■□□□ 1.28
CHMP5-201ENST00000223500 CCDC7Q96M83 1385 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms