RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 COG6Q9Y2V7 657 aa22.26■■□□□ 1.15
H2AFV-201ENST00000222690 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
H2AFV-201ENST00000222690 MAGI2Q86UL8 1455 aa22.26■■□□□ 1.15
H2AFV-201ENST00000222690 AFAP1Q8N556 730 aa22.24■■□□□ 1.15
H2AFV-201ENST00000222690 PANK1Q8TE04 598 aa22.24■■□□□ 1.15
H2AFV-201ENST00000222690 ARXQ96QS3 562 aa22.23■■□□□ 1.15
H2AFV-201ENST00000222690 EFCAB2Q5VUJ9 269 aa22.23■■□□□ 1.15
H2AFV-201ENST00000222690 SLKQ9H2G2 1235 aaPredicted RBP22.23■■□□□ 1.15
H2AFV-201ENST00000222690 BCL2L13Q9BXK5 485 aa22.22■■□□□ 1.15
H2AFV-201ENST00000222690 DMRT2Q9Y5R5 561 aa22.22■■□□□ 1.15
H2AFV-201ENST00000222690 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
H2AFV-201ENST00000222690 ARHGEF5Q12774 1597 aa22.22■■□□□ 1.15
H2AFV-201ENST00000222690 CFAP70Q5T0N1 1121 aa22.21■■□□□ 1.15
H2AFV-201ENST00000222690 IGHDP01880 384 aa22.2■■□□□ 1.14
H2AFV-201ENST00000222690 PRDM15P57071 1507 aaPredicted RBP22.2■■□□□ 1.14
H2AFV-201ENST00000222690 SPAG9O60271 1321 aaKnown RBP22.19■■□□□ 1.14
H2AFV-201ENST00000222690 E9PSI1 815 aa22.18■■□□□ 1.14
H2AFV-201ENST00000222690 CLUAP1Q96AJ1 413 aa22.18■■□□□ 1.14
H2AFV-201ENST00000222690 CENPJQ9HC77 1338 aaPredicted RBP22.18■■□□□ 1.14
H2AFV-201ENST00000222690 EIF5BO60841 1220 aaKnown RBP22.17■■□□□ 1.14
H2AFV-201ENST00000222690 WDR7Q9Y4E6 1490 aa22.17■■□□□ 1.14
H2AFV-201ENST00000222690 KIF3BO15066 747 aa22.16■■□□□ 1.14
H2AFV-201ENST00000222690 ZNF521Q96K83 1311 aa22.16■■□□□ 1.14
H2AFV-201ENST00000222690 SPRYD3Q8NCJ5 442 aa22.14■■□□□ 1.13
H2AFV-201ENST00000222690 CDC42BPBQ9Y5S2 1711 aa22.14■■□□□ 1.13
H2AFV-201ENST00000222690 MORC1Q86VD1 984 aa22.12■■□□□ 1.13
H2AFV-201ENST00000222690 INSRP06213 1382 aa22.12■■□□□ 1.13
H2AFV-201ENST00000222690 SEC24BO95487 1268 aa22.12■■□□□ 1.13
H2AFV-201ENST00000222690 EIF3AQ14152 1382 aaKnown RBP22.11■■□□□ 1.13
H2AFV-201ENST00000222690 NKTRP30414 1462 aaKnown RBP22.11■■□□□ 1.13
H2AFV-201ENST00000222690 EIF2AK4Q9P2K8 1649 aaKnown RBP22.11■■□□□ 1.13
H2AFV-201ENST00000222690 TTC37Q6PGP7 1564 aa22.1■■□□□ 1.13
H2AFV-201ENST00000222690 TRAK1Q9UPV9 953 aa22.1■■□□□ 1.13
H2AFV-201ENST00000222690 CGNL1Q0VF96 1302 aa22.09■■□□□ 1.13
H2AFV-201ENST00000222690 CARD14Q9BXL6 1004 aa22.09■■□□□ 1.13
H2AFV-201ENST00000222690 UPF2Q9HAU5 1272 aaKnown RBP22.09■■□□□ 1.13
H2AFV-201ENST00000222690 PREX2Q70Z35 1606 aa22.09■■□□□ 1.13
H2AFV-201ENST00000222690 ASXL1Q8IXJ9 1541 aa22.09■■□□□ 1.13
H2AFV-201ENST00000222690 SCAF11Q99590 1463 aaKnown RBP22.09■■□□□ 1.13
H2AFV-201ENST00000222690 BECN1Q14457 450 aa22.08■■□□□ 1.13
H2AFV-201ENST00000222690 WWC1Q8IX03 1113 aa22.08■■□□□ 1.13
H2AFV-201ENST00000222690 TRAPPC8Q9Y2L5 1435 aa22.07■■□□□ 1.12
H2AFV-201ENST00000222690 TNNQ9UQP3 1299 aa22.07■■□□□ 1.12
H2AFV-201ENST00000222690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.07■■□□□ 1.122e-6■■□□□ 13.3
H2AFV-201ENST00000222690 ADGRF5Q8IZF2 1346 aa22.06■■□□□ 1.12
H2AFV-201ENST00000222690 DUOX2Q9NRD8 1548 aa22.06■■□□□ 1.12
H2AFV-201ENST00000222690 MYO5CQ9NQX4 1742 aa22.05■■□□□ 1.12
H2AFV-201ENST00000222690 SLC12A5Q9H2X9 1139 aa22.04■■□□□ 1.12
H2AFV-201ENST00000222690 TRMT2AQ8IZ69 625 aaKnown RBP22.03■■□□□ 1.12
H2AFV-201ENST00000222690 TCP11L2Q8N4U5 519 aa22.03■■□□□ 1.12
H2AFV-201ENST00000222690 PIK3C2GO75747 1445 aa22.03■■□□□ 1.12
H2AFV-201ENST00000222690 KANK1Q14678 1352 aa22.03■■□□□ 1.12
H2AFV-201ENST00000222690 UNC13BO14795 1591 aa22.02■■□□□ 1.12
H2AFV-201ENST00000222690 PDE3AQ14432 1141 aa22.02■■□□□ 1.12
H2AFV-201ENST00000222690 POGKQ9P215 609 aa22.02■■□□□ 1.12
H2AFV-201ENST00000222690 NUTM2DQ5VT03 806 aaPredicted RBP22.02■■□□□ 1.12
H2AFV-201ENST00000222690 MAPK8IP3Q9UPT6 1336 aa22.02■■□□□ 1.12
H2AFV-201ENST00000222690 SAFB2Q14151 953 aaKnown RBP eCLIP22.01■■□□□ 1.11
H2AFV-201ENST00000222690 MAST1Q9Y2H9 1570 aa22.01■■□□□ 1.11
H2AFV-201ENST00000222690 TMEM132EQ6IEE7 984 aa22■■□□□ 1.11
H2AFV-201ENST00000222690 IQGAP3Q86VI3 1631 aa22■■□□□ 1.11
H2AFV-201ENST00000222690 FTSJ3Q8IY81 847 aaKnown RBP21.99■■□□□ 1.11
H2AFV-201ENST00000222690 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
H2AFV-201ENST00000222690 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.118e-7■□□□□ 8.6
H2AFV-201ENST00000222690 RLBP1P12271 317 aa21.99■■□□□ 1.11
H2AFV-201ENST00000222690 PCDHB15Q9Y5E8 787 aa21.98■■□□□ 1.11
H2AFV-201ENST00000222690 MTHFSP49914 203 aa21.97■■□□□ 1.11
H2AFV-201ENST00000222690 PDZRN3Q9UPQ7 1066 aa21.97■■□□□ 1.11
H2AFV-201ENST00000222690 RARSP54136 660 aaKnown RBP21.97■■□□□ 1.11
H2AFV-201ENST00000222690 PMFBP1Q8TBY8 1022 aa21.97■■□□□ 1.11
H2AFV-201ENST00000222690 GZF1Q9H116 711 aaPredicted RBP21.97■■□□□ 1.11
H2AFV-201ENST00000222690 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
H2AFV-201ENST00000222690 LAMC1P11047 1609 aa21.96■■□□□ 1.11
H2AFV-201ENST00000222690 PLCH2O75038 1416 aa21.95■■□□□ 1.11
H2AFV-201ENST00000222690 ATP10AO60312 1499 aa21.95■■□□□ 1.1
H2AFV-201ENST00000222690 CFAP53Q96M91 514 aa21.95■■□□□ 1.1
H2AFV-201ENST00000222690 U2SURPO15042 1029 aaKnown RBP21.95■■□□□ 1.1
H2AFV-201ENST00000222690 USP19O94966 1318 aa21.94■■□□□ 1.1
H2AFV-201ENST00000222690 PRKCSHP14314 528 aaPredicted RBP21.94■■□□□ 1.1
H2AFV-201ENST00000222690 STAC3Q96MF2 364 aa21.93■■□□□ 1.1
H2AFV-201ENST00000222690 MFAP1P55081 439 aaKnown RBP21.93■■□□□ 1.1
H2AFV-201ENST00000222690 NSD3Q9BZ95 1437 aa21.93■■□□□ 1.1
H2AFV-201ENST00000222690 GGT6Q6P531 493 aa21.93■■□□□ 1.1
H2AFV-201ENST00000222690 RWDD1Q9H446 243 aaPredicted RBP21.92■■□□□ 1.1
H2AFV-201ENST00000222690 SLC24A1O60721 1099 aa21.92■■□□□ 1.1
H2AFV-201ENST00000222690 SCAPERQ9BY12 1400 aa21.92■■□□□ 1.1
H2AFV-201ENST00000222690 TSR2Q969E8 191 aaKnown RBP21.91■■□□□ 1.1
H2AFV-201ENST00000222690 SYNMO15061 1565 aa21.91■■□□□ 1.1
H2AFV-201ENST00000222690 MADDQ8WXG6 1647 aa21.91■■□□□ 1.1
H2AFV-201ENST00000222690 PLXNC1O60486 1568 aa21.89■■□□□ 1.1
H2AFV-201ENST00000222690 NGEFQ8N5V2 710 aa21.89■■□□□ 1.1
H2AFV-201ENST00000222690 NPC1L1Q9UHC9 1359 aa21.89■■□□□ 1.1
H2AFV-201ENST00000222690 ERCC6L2Q5T890 1561 aa21.89■■□□□ 1.1
H2AFV-201ENST00000222690 SMC4Q9NTJ3 1288 aa21.89■■□□□ 1.09
H2AFV-201ENST00000222690 ITPRIPQ8IWB1 547 aa21.88■■□□□ 1.09
H2AFV-201ENST00000222690 UGGT1Q9NYU2 1555 aa21.88■■□□□ 1.09
H2AFV-201ENST00000222690 TBC1D2Q9BYX2 928 aa21.87■■□□□ 1.09
H2AFV-201ENST00000222690 MYH16Q9H6N6 1097 aa21.87■■□□□ 1.09
H2AFV-201ENST00000222690 ERVK-7P63135 1459 aa21.86■■□□□ 1.09
H2AFV-201ENST00000222690 RNF17Q9BXT8 1623 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms