RNA–Protein interactions for RNA: ENST00000222256.8

RAB3A-201, Transcript of RAB3A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3A, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-201ENST00000222256 ZFYVE9O95405 1425 aa31.1■■■□□ 2.57
RAB3A-201ENST00000222256 RIMS2Q9UQ26 1411 aa31.1■■■□□ 2.57
RAB3A-201ENST00000222256 PPLO60437 1756 aa31.09■■■□□ 2.57
RAB3A-201ENST00000222256 IFT172Q9UG01 1749 aa31.09■■■□□ 2.57
RAB3A-201ENST00000222256 L3MBTL2Q969R5 705 aa31.08■■■□□ 2.57
RAB3A-201ENST00000222256 HDGFP51858 240 aaKnown RBP31.08■■■□□ 2.57
RAB3A-201ENST00000222256 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.06■■■□□ 2.56
RAB3A-201ENST00000222256 DCAF11Q8TEB1 546 aa31.06■■■□□ 2.56
RAB3A-201ENST00000222256 STAC3Q96MF2 364 aa31.05■■■□□ 2.56
RAB3A-201ENST00000222256 HSPA2P54652 639 aa31.04■■■□□ 2.56
RAB3A-201ENST00000222256 EID1Q9Y6B2 187 aa31.04■■■□□ 2.56
RAB3A-201ENST00000222256 VGFO15240 615 aaPredicted RBP31.03■■■□□ 2.56
RAB3A-201ENST00000222256 TXNDC2Q86VQ3 553 aa31.03■■■□□ 2.56
RAB3A-201ENST00000222256 ANKLE2Q86XL3 938 aa31.02■■■□□ 2.56
RAB3A-201ENST00000222256 LTKP29376 864 aa31.01■■■□□ 2.55
RAB3A-201ENST00000222256 NUTM2DQ5VT03 806 aaPredicted RBP31.01■■■□□ 2.55
RAB3A-201ENST00000222256 MYOM2P54296 1465 aa31■■■□□ 2.55
RAB3A-201ENST00000222256 SCAF11Q99590 1463 aaKnown RBP31■■■□□ 2.55
RAB3A-201ENST00000222256 KDM2AQ9Y2K7 1162 aa30.99■■■□□ 2.55
RAB3A-201ENST00000222256 PPP1R15AO75807 674 aaPredicted RBP30.98■■■□□ 2.55
RAB3A-201ENST00000222256 POLR1AO95602 1720 aaPredicted RBP30.97■■■□□ 2.55
RAB3A-201ENST00000222256 ADGRF5Q8IZF2 1346 aa30.95■■■□□ 2.55
RAB3A-201ENST00000222256 NRXN1Q9ULB1 1477 aa30.94■■■□□ 2.54
RAB3A-201ENST00000222256 PLEKHG1Q9ULL1 1385 aa30.93■■■□□ 2.54
RAB3A-201ENST00000222256 NCKAP5LQ9HCH0 1330 aa30.92■■■□□ 2.54
RAB3A-201ENST00000222256 MED14O60244 1454 aa30.9■■■□□ 2.54
RAB3A-201ENST00000222256 STRCQ7RTU9 1775 aa30.9■■■□□ 2.54
RAB3A-201ENST00000222256 PIK3C2GO75747 1445 aa30.89■■■□□ 2.54
RAB3A-201ENST00000222256 PRAG1Q86YV5 1406 aa30.88■■■□□ 2.53
RAB3A-201ENST00000222256 SETBP1Q9Y6X0 1596 aa30.87■■■□□ 2.53
RAB3A-201ENST00000222256 NPHP4O75161 1426 aaPredicted RBP30.86■■■□□ 2.53
RAB3A-201ENST00000222256 BCANQ96GW7 911 aa30.84■■■□□ 2.53
RAB3A-201ENST00000222256 IQGAP1P46940 1657 aa30.84■■■□□ 2.53
RAB3A-201ENST00000222256 NRXN3Q9Y4C0 1643 aa30.83■■■□□ 2.53
RAB3A-201ENST00000222256 ZEB1P37275 1124 aaPredicted RBP30.83■■■□□ 2.53
RAB3A-201ENST00000222256 SENP3Q9H4L4 574 aaPredicted RBP30.83■■■□□ 2.53
RAB3A-201ENST00000222256 NBPF8Q3BBV2 869 aa30.81■■■□□ 2.52
RAB3A-201ENST00000222256 ADAMTS13Q76LX8 1427 aa30.8■■■□□ 2.52
RAB3A-201ENST00000222256 C14orf93Q9H972 538 aaKnown RBP30.79■■■□□ 2.52
RAB3A-201ENST00000222256 LAMC1P11047 1609 aa30.79■■■□□ 2.52
RAB3A-201ENST00000222256 ALKQ9UM73 1620 aa30.79■■■□□ 2.52
RAB3A-201ENST00000222256 KIAA1210Q9ULL0 1709 aa30.78■■■□□ 2.52
RAB3A-201ENST00000222256 DIP2AQ14689 1571 aa30.77■■■□□ 2.52
RAB3A-201ENST00000222256 CFAP70Q5T0N1 1121 aa30.77■■■□□ 2.52
RAB3A-201ENST00000222256 SLC26A8Q96RN1 970 aa30.76■■■□□ 2.51
RAB3A-201ENST00000222256 TBX22Q9Y458 520 aa30.76■■■□□ 2.51
RAB3A-201ENST00000222256 TRPM1Q7Z4N2 1603 aa30.75■■■□□ 2.51
RAB3A-201ENST00000222256 DMRT2Q9Y5R5 561 aa30.75■■■□□ 2.51
RAB3A-201ENST00000222256 SETD1AO15047 1707 aaKnown RBP30.74■■■□□ 2.51
RAB3A-201ENST00000222256 RALGAPBQ86X10 1494 aa30.7■■■□□ 2.51
RAB3A-201ENST00000222256 METP08581 1390 aa30.67■■■□□ 2.5
RAB3A-201ENST00000222256 NBPF1Q3BBV0 1214 aa30.67■■■□□ 2.5
RAB3A-201ENST00000222256 PIK3R4Q99570 1358 aa30.66■■■□□ 2.5
RAB3A-201ENST00000222256 ADGRB1O14514 1584 aa30.66■■■□□ 2.5
RAB3A-201ENST00000222256 ROCK2O75116 1388 aaKnown RBP30.65■■■□□ 2.5
RAB3A-201ENST00000222256 ASXL1Q8IXJ9 1541 aa30.65■■■□□ 2.5
RAB3A-201ENST00000222256 TMEM132EQ6IEE7 984 aa30.64■■■□□ 2.5
RAB3A-201ENST00000222256 GPRASP1Q5JY77 1395 aa30.63■■■□□ 2.49
RAB3A-201ENST00000222256 CHD2O14647 1828 aaKnown RBP30.6■■■□□ 2.49
RAB3A-201ENST00000222256 YTHDC2Q9H6S0 1430 aaKnown RBP30.59■■■□□ 2.49
RAB3A-201ENST00000222256 LRPPRCP42704 1394 aaKnown RBP30.58■■■□□ 2.49
RAB3A-201ENST00000222256 CARD11Q9BXL7 1154 aa30.57■■■□□ 2.49
RAB3A-201ENST00000222256 PTPRUQ92729 1446 aa30.57■■■□□ 2.48
RAB3A-201ENST00000222256 KCNA6P17658 529 aa30.54■■■□□ 2.48
RAB3A-201ENST00000222256 AMOTL2Q9Y2J4 779 aa30.54■■■□□ 2.48
RAB3A-201ENST00000222256 ABCC11Q96J66 1382 aa30.54■■■□□ 2.48
RAB3A-201ENST00000222256 XRN1Q8IZH2 1706 aaKnown RBP30.53■■■□□ 2.48
RAB3A-201ENST00000222256 STK26Q9P289 416 aa30.53■■■□□ 2.48
RAB3A-201ENST00000222256 NWD1Q149M9 1564 aa30.53■■■□□ 2.48
RAB3A-201ENST00000222256 KNDC1Q76NI1 1749 aa30.52■■■□□ 2.48
RAB3A-201ENST00000222256 TECPR2O15040 1411 aa30.51■■■□□ 2.48
RAB3A-201ENST00000222256 TRAK1Q9UPV9 953 aa30.49■■■□□ 2.47
RAB3A-201ENST00000222256 STRCP1A6NGW2 1772 aa30.48■■■□□ 2.47
RAB3A-201ENST00000222256 DLC1Q96QB1 1528 aa30.48■■■□□ 2.47
RAB3A-201ENST00000222256 ZNF335Q9H4Z2 1342 aaPredicted RBP30.48■■■□□ 2.47
RAB3A-201ENST00000222256 CPS1P31327 1500 aa30.47■■■□□ 2.47
RAB3A-201ENST00000222256 PTCH1Q13635 1447 aa30.46■■■□□ 2.47
RAB3A-201ENST00000222256 SIRT1Q96EB6 747 aa30.46■■■□□ 2.47
RAB3A-201ENST00000222256 NKTRP30414 1462 aaKnown RBP30.45■■■□□ 2.47
RAB3A-201ENST00000222256 ARHGEF28Q8N1W1 1705 aaKnown RBP30.45■■■□□ 2.46
RAB3A-201ENST00000222256 ROBO2Q9HCK4 1378 aa30.44■■■□□ 2.46
RAB3A-201ENST00000222256 EIF3AQ14152 1382 aaKnown RBP30.43■■■□□ 2.46
RAB3A-201ENST00000222256 USP47Q96K76 1375 aa30.43■■■□□ 2.46
RAB3A-201ENST00000222256 FAM135BQ49AJ0 1406 aa30.42■■■□□ 2.46
RAB3A-201ENST00000222256 PRAM1Q96QH2 718 aa30.39■■■□□ 2.46
RAB3A-201ENST00000222256 EIF4G2P78344 907 aaKnown RBP eCLIP30.38■■■□□ 2.45
RAB3A-201ENST00000222256 POGKQ9P215 609 aa30.37■■■□□ 2.45
RAB3A-201ENST00000222256 WAPLQ7Z5K2 1190 aa30.37■■■□□ 2.45
RAB3A-201ENST00000222256 PROSER2Q86WR7 435 aaPredicted RBP30.37■■■□□ 2.45
RAB3A-201ENST00000222256 CENPJQ9HC77 1338 aaPredicted RBP30.35■■■□□ 2.45
RAB3A-201ENST00000222256 PLEKHH1Q9ULM0 1364 aa30.34■■■□□ 2.45
RAB3A-201ENST00000222256 LTBP4Q8N2S1 1624 aa30.34■■■□□ 2.45
RAB3A-201ENST00000222256 ST20-MTHFSA0A0A6YYL1 179 aa30.32■■■□□ 2.44
RAB3A-201ENST00000222256 HSPA5P11021 654 aaKnown RBP30.32■■■□□ 2.44
RAB3A-201ENST00000222256 QRICH2Q9H0J4 1663 aa30.31■■■□□ 2.44
RAB3A-201ENST00000222256 LRRC7Q96NW7 1537 aa30.31■■■□□ 2.44
RAB3A-201ENST00000222256 SAFB2Q14151 953 aaKnown RBP eCLIP30.3■■■□□ 2.44
RAB3A-201ENST00000222256 TMEM94Q12767 1356 aa30.29■■■□□ 2.44
RAB3A-201ENST00000222256 NCOA3Q9Y6Q9 1424 aa30.29■■■□□ 2.44
RAB3A-201ENST00000222256 RBM33Q96EV2 1170 aaKnown RBP30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms