RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 TMC1Q8TDI8 760 aa30.01■■■□□ 2.39
CCDC9-201ENST00000221922 MROH2AA6NES4 1674 aa30.01■■■□□ 2.39
CCDC9-201ENST00000221922 SCAF11Q99590 1463 aaKnown RBP30■■■□□ 2.39
CCDC9-201ENST00000221922 CNGB1Q14028 1251 aaPredicted RBP30■■■□□ 2.39
CCDC9-201ENST00000221922 NPATQ14207 1427 aa30■■■□□ 2.39
CCDC9-201ENST00000221922 ADGRB3O60242 1522 aa30■■■□□ 2.39
CCDC9-201ENST00000221922 RAPGEF3O95398 923 aa29.99■■■□□ 2.39
CCDC9-201ENST00000221922 TMF1P82094 1093 aa29.98■■■□□ 2.39
CCDC9-201ENST00000221922 PNISRQ8TF01 805 aaKnown RBP29.98■■■□□ 2.39
CCDC9-201ENST00000221922 CAMSAP1Q5T5Y3 1602 aa29.97■■■□□ 2.39
CCDC9-201ENST00000221922 DIP2BQ9P265 1576 aa29.95■■■□□ 2.39
CCDC9-201ENST00000221922 FANCIQ9NVI1 1328 aa29.95■■■□□ 2.39
CCDC9-201ENST00000221922 WASHC2CQ9Y4E1 1318 aa29.95■■■□□ 2.38
CCDC9-201ENST00000221922 NRXN1Q9ULB1 1477 aa29.95■■■□□ 2.38
CCDC9-201ENST00000221922 ZC3H13Q5T200 1668 aaKnown RBP29.93■■■□□ 2.38
CCDC9-201ENST00000221922 GGT6Q6P531 493 aa29.93■■■□□ 2.38
CCDC9-201ENST00000221922 PARD3Q8TEW0 1356 aa29.93■■■□□ 2.38
CCDC9-201ENST00000221922 ZMYM4Q5VZL5 1548 aa29.91■■■□□ 2.38
CCDC9-201ENST00000221922 LRPPRCP42704 1394 aaKnown RBP29.91■■■□□ 2.38
CCDC9-201ENST00000221922 EIF3AQ14152 1382 aaKnown RBP29.9■■■□□ 2.38
CCDC9-201ENST00000221922 PER1O15534 1290 aaPredicted RBP29.89■■■□□ 2.37
CCDC9-201ENST00000221922 RNF123Q5XPI4 1314 aa29.88■■■□□ 2.37
CCDC9-201ENST00000221922 NUDCQ9Y266 331 aa29.88■■■□□ 2.37
CCDC9-201ENST00000221922 NLRP13Q86W25 1043 aa29.87■■■□□ 2.37
CCDC9-201ENST00000221922 NOS1P29475 1434 aa29.87■■■□□ 2.37
CCDC9-201ENST00000221922 PPLO60437 1756 aa29.87■■■□□ 2.37
CCDC9-201ENST00000221922 YEATS2Q9ULM3 1422 aa29.86■■■□□ 2.37
CCDC9-201ENST00000221922 SIGLEC1Q9BZZ2 1709 aa29.86■■■□□ 2.37
CCDC9-201ENST00000221922 ARHGAP31Q2M1Z3 1444 aa29.85■■■□□ 2.37
CCDC9-201ENST00000221922 PIK3C2BO00750 1634 aa29.85■■■□□ 2.37
CCDC9-201ENST00000221922 MSH5O43196 834 aa29.84■■■□□ 2.37
CCDC9-201ENST00000221922 ADGRF5Q8IZF2 1346 aa29.84■■■□□ 2.37
CCDC9-201ENST00000221922 B4GALNT3Q6L9W6 998 aa29.84■■■□□ 2.37
CCDC9-201ENST00000221922 CFAP65Q6ZU64 1925 aaKnown RBP29.84■■■□□ 2.37
CCDC9-201ENST00000221922 SETBP1Q9Y6X0 1596 aa29.83■■■□□ 2.37
CCDC9-201ENST00000221922 SYNMO15061 1565 aa29.82■■■□□ 2.36
CCDC9-201ENST00000221922 CDCA8Q53HL2 280 aa29.81■■■□□ 2.36
CCDC9-201ENST00000221922 FAM69CQ0P6D2 419 aa29.81■■■□□ 2.36
CCDC9-201ENST00000221922 MYO3AQ8NEV4 1616 aa29.79■■■□□ 2.36
CCDC9-201ENST00000221922 PANK3Q9H999 370 aa29.79■■■□□ 2.36
CCDC9-201ENST00000221922 CFAP70Q5T0N1 1121 aa29.78■■■□□ 2.36
CCDC9-201ENST00000221922 RPGRIP1LQ68CZ1 1315 aa29.78■■■□□ 2.36
CCDC9-201ENST00000221922 SLC24A1O60721 1099 aa29.76■■■□□ 2.36
CCDC9-201ENST00000221922 PIK3C2GO75747 1445 aa29.76■■■□□ 2.35
CCDC9-201ENST00000221922 KDM5AP29375 1690 aaKnown RBP29.75■■■□□ 2.35
CCDC9-201ENST00000221922 MYOM1P52179 1685 aa29.75■■■□□ 2.35
CCDC9-201ENST00000221922 REREQ9P2R6 1566 aa29.74■■■□□ 2.35
CCDC9-201ENST00000221922 TSPOAP1O95153 1857 aa29.73■■■□□ 2.35
CCDC9-201ENST00000221922 INSRP06213 1382 aa29.72■■■□□ 2.35
CCDC9-201ENST00000221922 CHGAP10645 457 aaKnown RBP29.72■■■□□ 2.35
CCDC9-201ENST00000221922 SBNO2Q9Y2G9 1366 aa29.7■■■□□ 2.35
CCDC9-201ENST00000221922 CC2D1BQ5T0F9 858 aaKnown RBP29.68■■■□□ 2.34
CCDC9-201ENST00000221922 PREX1Q8TCU6 1659 aa29.68■■■□□ 2.34
CCDC9-201ENST00000221922 ADGRB1O14514 1584 aa29.68■■■□□ 2.34
CCDC9-201ENST00000221922 ERVK-7P63135 1459 aa29.67■■■□□ 2.34
CCDC9-201ENST00000221922 NEXMIFQ5QGS0 1516 aa29.67■■■□□ 2.34
CCDC9-201ENST00000221922 C14orf93Q9H972 538 aaKnown RBP29.66■■■□□ 2.34
CCDC9-201ENST00000221922 AGLP35573 1532 aa29.66■■■□□ 2.34
CCDC9-201ENST00000221922 KNSTRNQ9Y448 316 aa29.63■■■□□ 2.33
CCDC9-201ENST00000221922 DNAJC5Q9H3Z4 198 aa29.62■■■□□ 2.33
CCDC9-201ENST00000221922 SLC52A1Q9NWF4 448 aa29.62■■■□□ 2.33
CCDC9-201ENST00000221922 ASXL1Q8IXJ9 1541 aa29.61■■■□□ 2.33
CCDC9-201ENST00000221922 PDE3BQ13370 1112 aa29.6■■■□□ 2.33
CCDC9-201ENST00000221922 KIF13AQ9H1H9 1805 aa29.59■■■□□ 2.33
CCDC9-201ENST00000221922 NPC1L1Q9UHC9 1359 aa29.59■■■□□ 2.33
CCDC9-201ENST00000221922 BLMP54132 1417 aaPredicted RBP29.59■■■□□ 2.33
CCDC9-201ENST00000221922 ZFYVE9O95405 1425 aa29.58■■■□□ 2.33
CCDC9-201ENST00000221922 QRICH2Q9H0J4 1663 aa29.57■■■□□ 2.32
CCDC9-201ENST00000221922 CENPJQ9HC77 1338 aaPredicted RBP29.57■■■□□ 2.32
CCDC9-201ENST00000221922 TMEM131LA2VDJ0 1609 aa29.57■■■□□ 2.32
CCDC9-201ENST00000221922 VGFO15240 615 aaPredicted RBP29.57■■■□□ 2.32
CCDC9-201ENST00000221922 AMER1Q5JTC6 1135 aaPredicted RBP29.57■■■□□ 2.32
CCDC9-201ENST00000221922 CCDC136Q96JN2 1154 aa29.56■■■□□ 2.32
CCDC9-201ENST00000221922 IDI1Q13907 227 aa29.56■■■□□ 2.32
CCDC9-201ENST00000221922 PPP6R1Q9UPN7 881 aa29.56■■■□□ 2.32
CCDC9-201ENST00000221922 MYO5BQ9ULV0 1848 aa29.53■■■□□ 2.32
CCDC9-201ENST00000221922 SENP3-EIF4A1A0A087X0R7 540 aa29.52■■■□□ 2.32
CCDC9-201ENST00000221922 ARHGEF40Q8TER5 1519 aa29.51■■■□□ 2.31
CCDC9-201ENST00000221922 ARHGEF28Q8N1W1 1705 aaKnown RBP29.49■■■□□ 2.31
CCDC9-201ENST00000221922 ERICH6Q7L0X2 663 aa29.49■■■□□ 2.31
CCDC9-201ENST00000221922 PPP2R1AP30153 589 aa29.48■■■□□ 2.31
CCDC9-201ENST00000221922 TRAK1Q9UPV9 953 aa29.48■■■□□ 2.31
CCDC9-201ENST00000221922 CLTCQ00610 1675 aaKnown RBP29.47■■■□□ 2.31
CCDC9-201ENST00000221922 RRP1P56182 461 aaKnown RBP29.46■■■□□ 2.31
CCDC9-201ENST00000221922 TMEM132EQ6IEE7 984 aa29.44■■■□□ 2.3
CCDC9-201ENST00000221922 RCAN3Q9UKA8 241 aa29.42■■■□□ 2.3
CCDC9-201ENST00000221922 SPATA31D1Q6ZQQ2 1576 aa29.42■■■□□ 2.3
CCDC9-201ENST00000221922 SALL2Q9Y467 1007 aaPredicted RBP29.4■■■□□ 2.3
CCDC9-201ENST00000221922 WDR43Q15061 677 aaKnown RBP eCLIP29.39■■■□□ 2.3
CCDC9-201ENST00000221922 NUTM2DQ5VT03 806 aaPredicted RBP29.39■■■□□ 2.3
CCDC9-201ENST00000221922 FBXO31Q5XUX0 539 aaPredicted RBP29.39■■■□□ 2.3
CCDC9-201ENST00000221922 PUS7Q96PZ0 661 aaKnown RBP29.38■■■□□ 2.29
CCDC9-201ENST00000221922 CARD14Q9BXL6 1004 aa29.36■■■□□ 2.29
CCDC9-201ENST00000221922 ADAMTS8Q9UP79 889 aa29.35■■■□□ 2.29
CCDC9-201ENST00000221922 TULP4Q9NRJ4 1543 aa29.34■■■□□ 2.29
CCDC9-201ENST00000221922 USP32Q8NFA0 1604 aa29.34■■■□□ 2.29
CCDC9-201ENST00000221922 EXOC6Q8TAG9 804 aa29.3■■■□□ 2.28
CCDC9-201ENST00000221922 EVC2Q86UK5 1308 aa29.3■■■□□ 2.28
CCDC9-201ENST00000221922 CDCA7LQ96GN5 454 aa29.29■■■□□ 2.28
CCDC9-201ENST00000221922 A2ML1A8K2U0 1454 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms