RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 PHF14O94880 888 aa12.95□□□□□ -0.34
TRPS1-201ENST00000220888 RTN4Q9NQC3 1192 aaKnown RBP12.95□□□□□ -0.34
TRPS1-201ENST00000220888 NFXL1Q6ZNB6 911 aa12.95□□□□□ -0.34
TRPS1-201ENST00000220888 PCMTD1Q96MG8 357 aaPredicted RBP12.95□□□□□ -0.34
TRPS1-201ENST00000220888 NECTIN2Q92692 538 aa12.95□□□□□ -0.34
TRPS1-201ENST00000220888 PHLDB1Q86UU1 1377 aa12.94□□□□□ -0.34
TRPS1-201ENST00000220888 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
TRPS1-201ENST00000220888 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
TRPS1-201ENST00000220888 IKQ13123 557 aaPredicted RBP12.94□□□□□ -0.34
TRPS1-201ENST00000220888 L3MBTL2Q969R5 705 aa12.93□□□□□ -0.34
TRPS1-201ENST00000220888 ATP6V1DQ9Y5K8 247 aa12.93□□□□□ -0.34
TRPS1-201ENST00000220888 KANK4Q5T7N3 995 aaPredicted RBP12.93□□□□□ -0.34
TRPS1-201ENST00000220888 CCDC27Q2M243 656 aa12.93□□□□□ -0.34
TRPS1-201ENST00000220888 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.93□□□□□ -0.341e-6■■■■■ 160.6
TRPS1-201ENST00000220888 PROSER2Q86WR7 435 aaPredicted RBP12.93□□□□□ -0.34
TRPS1-201ENST00000220888 ANKRD20A12PQ8NF67 263 aa12.93□□□□□ -0.34
TRPS1-201ENST00000220888 DIAPH1O60610 1272 aaKnown RBP12.92□□□□□ -0.34
TRPS1-201ENST00000220888 WWC2Q6AWC2 1192 aa12.92□□□□□ -0.34
TRPS1-201ENST00000220888 IPO7O95373 1038 aaKnown RBP12.92□□□□□ -0.34
TRPS1-201ENST00000220888 ANKRD45Q5TZF3 282 aa12.92□□□□□ -0.34
TRPS1-201ENST00000220888 FOXD4L5Q5VV16 416 aaPredicted RBP12.92□□□□□ -0.34
TRPS1-201ENST00000220888 FOXD4L4Q8WXT5 416 aaPredicted RBP12.92□□□□□ -0.34
TRPS1-201ENST00000220888 VPS8Q8N3P4 1428 aa12.92□□□□□ -0.34
TRPS1-201ENST00000220888 PDE3BQ13370 1112 aa12.92□□□□□ -0.34
TRPS1-201ENST00000220888 FYB1O15117 783 aa12.91□□□□□ -0.34
TRPS1-201ENST00000220888 FKBP5Q13451 457 aaPredicted RBP12.91□□□□□ -0.34
TRPS1-201ENST00000220888 RIC3Q7Z5B4 369 aa12.91□□□□□ -0.34
TRPS1-201ENST00000220888 CADPSQ9ULU8 1353 aa12.91□□□□□ -0.34
TRPS1-201ENST00000220888 NUTM2BA6NNL0 878 aaPredicted RBP12.91□□□□□ -0.34
TRPS1-201ENST00000220888 BECN2A8MW95 431 aa12.91□□□□□ -0.34
TRPS1-201ENST00000220888 NUTM2EB1AL46 878 aaPredicted RBP12.91□□□□□ -0.34
TRPS1-201ENST00000220888 NUTM2AQ8IVF1 878 aaPredicted RBP12.91□□□□□ -0.34
TRPS1-201ENST00000220888 GPRASP1Q5JY77 1395 aa12.91□□□□□ -0.34
TRPS1-201ENST00000220888 PAF1Q8N7H5 531 aa12.91□□□□□ -0.34
TRPS1-201ENST00000220888 PANK3Q9H999 370 aa12.91□□□□□ -0.34
TRPS1-201ENST00000220888 GOLGA6L19H0YKK7 550 aa12.9□□□□□ -0.34
TRPS1-201ENST00000220888 ZKSCAN2Q63HK3 967 aa12.9□□□□□ -0.34
TRPS1-201ENST00000220888 CCDC70Q6NSX1 233 aa12.9□□□□□ -0.34
TRPS1-201ENST00000220888 TMEM132AQ24JP5 1023 aa12.9□□□□□ -0.34
TRPS1-201ENST00000220888 RNF20Q5VTR2 975 aa12.9□□□□□ -0.34
TRPS1-201ENST00000220888 CT47A1Q5JQC4 288 aaPredicted RBP12.89□□□□□ -0.35
TRPS1-201ENST00000220888 HOOK1Q9UJC3 728 aaKnown RBP12.89□□□□□ -0.35
TRPS1-201ENST00000220888 FHOD3Q2V2M9 1422 aa12.89□□□□□ -0.35
TRPS1-201ENST00000220888 RAB3GAP2Q9H2M9 1393 aa12.89□□□□□ -0.35
TRPS1-201ENST00000220888 NEUROD6Q96NK8 337 aa12.89□□□□□ -0.35
TRPS1-201ENST00000220888 ODF2Q5BJF6 829 aa12.88□□□□□ -0.35
TRPS1-201ENST00000220888 NUTM2GQ5VZR2 741 aa12.88□□□□□ -0.35
TRPS1-201ENST00000220888 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
TRPS1-201ENST00000220888 STRN4Q9NRL3 753 aa12.88□□□□□ -0.35
TRPS1-201ENST00000220888 FAM177BA6PVY3 158 aa12.88□□□□□ -0.35
TRPS1-201ENST00000220888 BCL2L13Q9BXK5 485 aa12.88□□□□□ -0.35
TRPS1-201ENST00000220888 ANO2Q9NQ90 1003 aa12.88□□□□□ -0.35
TRPS1-201ENST00000220888 NLRP6P59044 892 aa12.88□□□□□ -0.35
TRPS1-201ENST00000220888 AIMP1Q12904 312 aaKnown RBP12.88□□□□□ -0.35
TRPS1-201ENST00000220888 SAFBQ15424 915 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRPS1-201ENST00000220888 HSP90AB4PQ58FF6 505 aa12.88□□□□□ -0.35
TRPS1-201ENST00000220888 API5Q9BZZ5 524 aaKnown RBP12.88□□□□□ -0.35
TRPS1-201ENST00000220888 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
TRPS1-201ENST00000220888 PLIN1O60240 522 aa12.87□□□□□ -0.35
TRPS1-201ENST00000220888 ST20-MTHFSA0A0A6YYL1 179 aa12.87□□□□□ -0.35
TRPS1-201ENST00000220888 WASHC4Q2M389 1173 aa12.87□□□□□ -0.35
TRPS1-201ENST00000220888 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
TRPS1-201ENST00000220888 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
TRPS1-201ENST00000220888 SLC4A3P48751 1232 aa12.86□□□□□ -0.35
TRPS1-201ENST00000220888 RALYLQ86SE5 291 aaKnown RBP12.86□□□□□ -0.35
TRPS1-201ENST00000220888 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
TRPS1-201ENST00000220888 KIF6Q6ZMV9 814 aa12.86□□□□□ -0.35
TRPS1-201ENST00000220888 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
TRPS1-201ENST00000220888 CCAR2Q8N163 923 aaKnown RBP12.85□□□□□ -0.35
TRPS1-201ENST00000220888 MTMR7Q9Y216 660 aa12.85□□□□□ -0.35
TRPS1-201ENST00000220888 E9PSI1 815 aa12.85□□□□□ -0.35
TRPS1-201ENST00000220888 PIP4K2BP78356 416 aa12.85□□□□□ -0.35
TRPS1-201ENST00000220888 ROCK1Q13464 1354 aa12.85□□□□□ -0.35
TRPS1-201ENST00000220888 RIPK4P57078 832 aa12.85□□□□□ -0.35
TRPS1-201ENST00000220888 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
TRPS1-201ENST00000220888 REC8O95072 547 aa12.84□□□□□ -0.35
TRPS1-201ENST00000220888 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
TRPS1-201ENST00000220888 ERC2O15083 957 aa12.84□□□□□ -0.35
TRPS1-201ENST00000220888 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
TRPS1-201ENST00000220888 TBC1D2BQ9UPU7 963 aa12.84□□□□□ -0.35
TRPS1-201ENST00000220888 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.35
TRPS1-201ENST00000220888 TXNDC2Q86VQ3 553 aa12.83□□□□□ -0.35
TRPS1-201ENST00000220888 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
TRPS1-201ENST00000220888 XBP1P17861 261 aa12.82□□□□□ -0.36
TRPS1-201ENST00000220888 FOXD4L6Q3SYB3 417 aaPredicted RBP12.82□□□□□ -0.36
TRPS1-201ENST00000220888 FOXD4L3Q6VB84 417 aaPredicted RBP12.82□□□□□ -0.36
TRPS1-201ENST00000220888 CCDC88BA6NC98 1476 aa12.82□□□□□ -0.36
TRPS1-201ENST00000220888 ZFYVE27Q5T4F4 411 aa12.82□□□□□ -0.36
TRPS1-201ENST00000220888 SLC3A2P08195 630 aaKnown RBP12.82□□□□□ -0.36
TRPS1-201ENST00000220888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
TRPS1-201ENST00000220888 TNNT3P45378 269 aaPredicted RBP12.81□□□□□ -0.36
TRPS1-201ENST00000220888 GNAI1P63096 354 aa12.81□□□□□ -0.36
TRPS1-201ENST00000220888 MIA2Q96PC5 1412 aa12.81□□□□□ -0.36
TRPS1-201ENST00000220888 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
TRPS1-201ENST00000220888 ARID3AQ99856 593 aa12.81□□□□□ -0.36
TRPS1-201ENST00000220888 DDX19BQ9UMR2 479 aa12.8□□□□□ -0.36
TRPS1-201ENST00000220888 EPS15P42566 896 aa12.8□□□□□ -0.36
TRPS1-201ENST00000220888 SART3Q15020 963 aaKnown RBP12.8□□□□□ -0.36
TRPS1-201ENST00000220888 TATP17735 454 aaPredicted RBP12.8□□□□□ -0.36
TRPS1-201ENST00000220888 THEMISQ8N1K5 641 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms