RNA–Protein interactions for RNA: ENST00000220676.1

RP1-201, Transcript of RP1, axonemal microtubule associated, humanhuman

TSL 1 (best) BASIC

Gene RP1, Length 7,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP1-201ENST00000220676 CPLX1O14810 134 aa13.34□□□□□ -0.27
RP1-201ENST00000220676 IFIT2P09913 472 aaKnown RBP13.34□□□□□ -0.27
RP1-201ENST00000220676 CT47A1Q5JQC4 288 aaPredicted RBP13.34□□□□□ -0.27
RP1-201ENST00000220676 PHF14O94880 888 aa13.33□□□□□ -0.28
RP1-201ENST00000220676 SETD5Q9C0A6 1442 aa13.33□□□□□ -0.28
RP1-201ENST00000220676 ODF2Q5BJF6 829 aa13.33□□□□□ -0.28
RP1-201ENST00000220676 NEUROD6Q96NK8 337 aa13.33□□□□□ -0.28
RP1-201ENST00000220676 KANK4Q5T7N3 995 aaPredicted RBP13.32□□□□□ -0.28
RP1-201ENST00000220676 STK11IPQ8N1F8 1099 aa13.32□□□□□ -0.28
RP1-201ENST00000220676 ERICH2A1L162 156 aa13.32□□□□□ -0.28
RP1-201ENST00000220676 R3HCC1Q9Y3T6 440 aaKnown RBP13.32□□□□□ -0.28
RP1-201ENST00000220676 NUTM2BA6NNL0 878 aaPredicted RBP13.31□□□□□ -0.28
RP1-201ENST00000220676 NUTM2EB1AL46 878 aaPredicted RBP13.31□□□□□ -0.28
RP1-201ENST00000220676 SKIDA1Q1XH10 827 aa13.31□□□□□ -0.28
RP1-201ENST00000220676 NUTM2AQ8IVF1 878 aaPredicted RBP13.31□□□□□ -0.28
RP1-201ENST00000220676 TRDNQ13061 729 aa13.3□□□□□ -0.28
RP1-201ENST00000220676 TDRD9Q8NDG6 1382 aaKnown RBP13.3□□□□□ -0.28
RP1-201ENST00000220676 ANKRD30AQ9BXX3 1397 aa13.3□□□□□ -0.28
RP1-201ENST00000220676 PANK3Q9H999 370 aa13.3□□□□□ -0.28
RP1-201ENST00000220676 TNIKQ9UKE5 1360 aa13.3□□□□□ -0.28
RP1-201ENST00000220676 ATF3P18847 181 aa13.3□□□□□ -0.28
RP1-201ENST00000220676 CCDC47Q96A33 483 aaKnown RBP13.3□□□□□ -0.28
RP1-201ENST00000220676 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
RP1-201ENST00000220676 WASHC4Q2M389 1173 aa13.29□□□□□ -0.28
RP1-201ENST00000220676 CCDC70Q6NSX1 233 aa13.29□□□□□ -0.28
RP1-201ENST00000220676 DDX49Q9Y6V7 483 aaKnown RBP13.29□□□□□ -0.28
RP1-201ENST00000220676 BICD2Q8TD16 824 aa13.28□□□□□ -0.28
RP1-201ENST00000220676 CPLX2Q6PUV4 134 aaKnown RBP13.28□□□□□ -0.28
RP1-201ENST00000220676 HMOX1P09601 288 aa13.28□□□□□ -0.28
RP1-201ENST00000220676 NLRP2Q9NX02 1062 aa13.28□□□□□ -0.28
RP1-201ENST00000220676 ATP2B2Q01814 1243 aa13.28□□□□□ -0.28
RP1-201ENST00000220676 FKBP5Q13451 457 aaPredicted RBP13.28□□□□□ -0.28
RP1-201ENST00000220676 RIC3Q7Z5B4 369 aa13.28□□□□□ -0.28
RP1-201ENST00000220676 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.28
RP1-201ENST00000220676 STRN4Q9NRL3 753 aa13.27□□□□□ -0.28
RP1-201ENST00000220676 G3BP1Q13283 466 aaKnown RBP eCLIP13.27□□□□□ -0.28
RP1-201ENST00000220676 EPS15P42566 896 aa13.27□□□□□ -0.29
RP1-201ENST00000220676 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.29
RP1-201ENST00000220676 COG6Q9Y2V7 657 aa13.27□□□□□ -0.29
RP1-201ENST00000220676 VPS37CA5D8V6 355 aaPredicted RBP13.27□□□□□ -0.29
RP1-201ENST00000220676 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
RP1-201ENST00000220676 IPO7O95373 1038 aaKnown RBP13.26□□□□□ -0.29
RP1-201ENST00000220676 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
RP1-201ENST00000220676 HOMER1Q86YM7 354 aa13.26□□□□□ -0.29
RP1-201ENST00000220676 LRRFIP1Q32MZ4 808 aaKnown RBP13.26□□□□□ -0.29
RP1-201ENST00000220676 CCER2I3L3R5 266 aa13.25□□□□□ -0.29
RP1-201ENST00000220676 CHMP4CQ96CF2 233 aa13.25□□□□□ -0.29
RP1-201ENST00000220676 PIP4K2BP78356 416 aa13.25□□□□□ -0.29
RP1-201ENST00000220676 SF3B2Q13435 895 aaKnown RBP13.25□□□□□ -0.29
RP1-201ENST00000220676 L3MBTL2Q969R5 705 aa13.25□□□□□ -0.29
RP1-201ENST00000220676 ANKRD20A12PQ8NF67 263 aa13.24□□□□□ -0.29
RP1-201ENST00000220676 DDX58O95786 925 aaKnown RBP13.24□□□□□ -0.29
RP1-201ENST00000220676 SOGA1O94964 1423 aa13.24□□□□□ -0.29
RP1-201ENST00000220676 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
RP1-201ENST00000220676 ZKSCAN1P17029 563 aaPredicted RBP13.23□□□□□ -0.29
RP1-201ENST00000220676 TSPYL4Q9UJ04 414 aa13.23□□□□□ -0.29
RP1-201ENST00000220676 ATP2B1P20020 1258 aa13.23□□□□□ -0.29
RP1-201ENST00000220676 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
RP1-201ENST00000220676 RRP12Q5JTH9 1297 aaKnown RBP13.23□□□□□ -0.29
RP1-201ENST00000220676 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
RP1-201ENST00000220676 RIPK4P57078 832 aa13.22□□□□□ -0.29
RP1-201ENST00000220676 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
RP1-201ENST00000220676 EVC2Q86UK5 1308 aa13.22□□□□□ -0.29
RP1-201ENST00000220676 ST20-MTHFSA0A0A6YYL1 179 aa13.22□□□□□ -0.29
RP1-201ENST00000220676 FAM161AQ3B820 660 aa13.22□□□□□ -0.29
RP1-201ENST00000220676 CRBNQ96SW2 442 aa13.22□□□□□ -0.29
RP1-201ENST00000220676 RAB3GAP2Q9H2M9 1393 aa13.22□□□□□ -0.29
RP1-201ENST00000220676 CGNL1Q0VF96 1302 aa13.22□□□□□ -0.29
RP1-201ENST00000220676 PDILTQ8N807 584 aa13.22□□□□□ -0.29
RP1-201ENST00000220676 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
RP1-201ENST00000220676 RBM5P52756 815 aaKnown RBP eCLIP13.21□□□□□ -0.29
RP1-201ENST00000220676 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.2□□□□□ -0.3
RP1-201ENST00000220676 DNAJC2Q99543 621 aaKnown RBP13.2□□□□□ -0.3
RP1-201ENST00000220676 ZNF771Q7L3S4 317 aaPredicted RBP13.2□□□□□ -0.3
RP1-201ENST00000220676 IPO9Q96P70 1041 aaKnown RBP13.2□□□□□ -0.3
RP1-201ENST00000220676 CHMP4BP1P59074 171 aa13.19□□□□□ -0.3
RP1-201ENST00000220676 ATP6V1DQ9Y5K8 247 aa13.19□□□□□ -0.3
RP1-201ENST00000220676 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
RP1-201ENST00000220676 DIAPH1O60610 1272 aaKnown RBP13.19□□□□□ -0.3
RP1-201ENST00000220676 HOOK1Q9UJC3 728 aaKnown RBP13.19□□□□□ -0.3
RP1-201ENST00000220676 OFD1O75665 1012 aa13.19□□□□□ -0.3
RP1-201ENST00000220676 NLRP13Q86W25 1043 aa13.19□□□□□ -0.3
RP1-201ENST00000220676 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
RP1-201ENST00000220676 SAFBQ15424 915 aaKnown RBP eCLIP13.18□□□□□ -0.3
RP1-201ENST00000220676 APAF1O14727 1248 aa13.18□□□□□ -0.3
RP1-201ENST00000220676 FAM69CQ0P6D2 419 aa13.18□□□□□ -0.3
RP1-201ENST00000220676 DHX37Q8IY37 1157 aaKnown RBP13.18□□□□□ -0.3
RP1-201ENST00000220676 PPM1FP49593 454 aaPredicted RBP13.17□□□□□ -0.3
RP1-201ENST00000220676 EXOC6Q8TAG9 804 aa13.17□□□□□ -0.3
RP1-201ENST00000220676 RUFY1Q96T51 708 aa13.17□□□□□ -0.3
RP1-201ENST00000220676 GPS2Q13227 327 aa13.17□□□□□ -0.3
RP1-201ENST00000220676 VGFO15240 615 aaPredicted RBP13.17□□□□□ -0.3
RP1-201ENST00000220676 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
RP1-201ENST00000220676 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
RP1-201ENST00000220676 ESCO1Q5FWF5 840 aa13.16□□□□□ -0.3
RP1-201ENST00000220676 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
RP1-201ENST00000220676 SASS6Q6UVJ0 657 aa13.16□□□□□ -0.3
RP1-201ENST00000220676 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
RP1-201ENST00000220676 ZHX3Q9H4I2 956 aa13.15□□□□□ -0.3
RP1-201ENST00000220676 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms