RNA–Protein interactions for RNA: ENST00000217398.3

PXMP4-201, Transcript of peroxisomal membrane protein 4, humanhuman

TSL 2 BASIC

Gene PXMP4, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-201ENST00000217398 KCNA6P17658 529 aa28.07■■■□□ 2.08
PXMP4-201ENST00000217398 SLC26A8Q96RN1 970 aa28.07■■■□□ 2.08
PXMP4-201ENST00000217398 CHD2O14647 1828 aaKnown RBP28.04■■■□□ 2.08
PXMP4-201ENST00000217398 TMEM94Q12767 1356 aa28.04■■■□□ 2.08
PXMP4-201ENST00000217398 RIMS2Q9UQ26 1411 aa28.03■■■□□ 2.08
PXMP4-201ENST00000217398 PLEKHG1Q9ULL1 1385 aa28.03■■■□□ 2.08
PXMP4-201ENST00000217398 NKTRP30414 1462 aaKnown RBP28.02■■■□□ 2.08
PXMP4-201ENST00000217398 PPARGC1BQ86YN6 1023 aaKnown RBP28.02■■■□□ 2.08
PXMP4-201ENST00000217398 NUP155O75694 1391 aa27.98■■■□□ 2.07
PXMP4-201ENST00000217398 FAM135BQ49AJ0 1406 aa27.97■■■□□ 2.07
PXMP4-201ENST00000217398 ITGAEP38570 1179 aa27.96■■■□□ 2.07
PXMP4-201ENST00000217398 RRBP1Q9P2E9 1410 aaKnown RBP27.95■■■□□ 2.07
PXMP4-201ENST00000217398 ADAMTS13Q76LX8 1427 aa27.94■■■□□ 2.06
PXMP4-201ENST00000217398 PROSER2Q86WR7 435 aaPredicted RBP27.94■■■□□ 2.06
PXMP4-201ENST00000217398 RBM33Q96EV2 1170 aaKnown RBP27.94■■■□□ 2.06
PXMP4-201ENST00000217398 SPHKAPQ2M3C7 1700 aa27.92■■■□□ 2.06
PXMP4-201ENST00000217398 ROBO1Q9Y6N7 1651 aa27.92■■■□□ 2.06
PXMP4-201ENST00000217398 SENP3Q9H4L4 574 aaPredicted RBP27.91■■■□□ 2.06
PXMP4-201ENST00000217398 TBX22Q9Y458 520 aa27.91■■■□□ 2.06
PXMP4-201ENST00000217398 HDGFP51858 240 aaKnown RBP27.89■■■□□ 2.06
PXMP4-201ENST00000217398 DIP2AQ14689 1571 aa27.89■■■□□ 2.05
PXMP4-201ENST00000217398 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.88■■■□□ 2.05
PXMP4-201ENST00000217398 CHGAP10645 457 aaKnown RBP27.87■■■□□ 2.05
PXMP4-201ENST00000217398 BCANQ96GW7 911 aa27.87■■■□□ 2.05
PXMP4-201ENST00000217398 PPP1R15AO75807 674 aaPredicted RBP27.86■■■□□ 2.05
PXMP4-201ENST00000217398 NRXN3Q9Y4C0 1643 aa27.85■■■□□ 2.05
PXMP4-201ENST00000217398 NAIPQ13075 1403 aa27.84■■■□□ 2.05
PXMP4-201ENST00000217398 NUTM2DQ5VT03 806 aaPredicted RBP27.84■■■□□ 2.05
PXMP4-201ENST00000217398 MSH6P52701 1360 aa27.82■■■□□ 2.04
PXMP4-201ENST00000217398 PIK3R4Q99570 1358 aa27.82■■■□□ 2.04
PXMP4-201ENST00000217398 NCOA3Q9Y6Q9 1424 aa27.82■■■□□ 2.04
PXMP4-201ENST00000217398 CLTCL1P53675 1640 aa27.79■■■□□ 2.04
PXMP4-201ENST00000217398 PTPRUQ92729 1446 aa27.79■■■□□ 2.04
PXMP4-201ENST00000217398 SETBP1Q9Y6X0 1596 aa27.78■■■□□ 2.04
PXMP4-201ENST00000217398 TRPM2O94759 1503 aa27.77■■■□□ 2.04
PXMP4-201ENST00000217398 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.77■■■□□ 2.04
PXMP4-201ENST00000217398 SLAIN2Q9P270 581 aa27.76■■■□□ 2.03
PXMP4-201ENST00000217398 RGS17Q9UGC6 210 aaPredicted RBP27.76■■■□□ 2.03
PXMP4-201ENST00000217398 XRN1Q8IZH2 1706 aaKnown RBP27.75■■■□□ 2.03
PXMP4-201ENST00000217398 PHF23Q9BUL5 403 aaPredicted RBP27.75■■■□□ 2.03
PXMP4-201ENST00000217398 PHLPP1O60346 1717 aa27.73■■■□□ 2.03
PXMP4-201ENST00000217398 NEXMIFQ5QGS0 1516 aa27.72■■■□□ 2.03
PXMP4-201ENST00000217398 HFM1A2PYH4 1435 aa27.71■■■□□ 2.03
PXMP4-201ENST00000217398 COL16A1Q07092 1604 aaPredicted RBP27.7■■■□□ 2.03
PXMP4-201ENST00000217398 KIF1BO60333 1816 aa27.7■■■□□ 2.02
PXMP4-201ENST00000217398 AMOTL2Q9Y2J4 779 aa27.69■■■□□ 2.02
PXMP4-201ENST00000217398 C19orf44Q9H6X5 657 aa27.66■■■□□ 2.02
PXMP4-201ENST00000217398 METP08581 1390 aa27.64■■■□□ 2.02
PXMP4-201ENST00000217398 AHDC1Q5TGY3 1603 aaPredicted RBP27.63■■■□□ 2.01
PXMP4-201ENST00000217398 SETD1AO15047 1707 aaKnown RBP27.62■■■□□ 2.01
PXMP4-201ENST00000217398 ZNF326Q5BKZ1 582 aaKnown RBP27.61■■■□□ 2.01
PXMP4-201ENST00000217398 CADPS2Q86UW7 1296 aa27.61■■■□□ 2.01
PXMP4-201ENST00000217398 JCADQ9P266 1359 aa27.6■■■□□ 2.01
PXMP4-201ENST00000217398 DCCP43146 1447 aa27.59■■■□□ 2.01
PXMP4-201ENST00000217398 C14orf37Q86TY3 774 aa27.58■■■□□ 2.01
PXMP4-201ENST00000217398 ATF3P18847 181 aa27.56■■■□□ 2
PXMP4-201ENST00000217398 POTEAQ6S8J7 498 aa27.55■■■□□ 2
PXMP4-201ENST00000217398 SHPRHQ149N8 1683 aa27.55■■■□□ 2
PXMP4-201ENST00000217398 PPLO60437 1756 aa27.54■■■□□ 2
PXMP4-201ENST00000217398 NALCNQ8IZF0 1738 aa27.54■■■□□ 2
PXMP4-201ENST00000217398 MST1RQ04912 1400 aa27.53■■■□□ 2
PXMP4-201ENST00000217398 TRIM52Q96A61 297 aa27.53■■■□□ 2
PXMP4-201ENST00000217398 LRP6O75581 1613 aa27.52■■■□□ 2
PXMP4-201ENST00000217398 BRINP3Q76B58 766 aa27.52■■■□□ 2
PXMP4-201ENST00000217398 NHSL1Q5SYE7 1610 aa27.51■■□□□ 1.99
PXMP4-201ENST00000217398 ADGRL3Q9HAR2 1447 aa27.5■■□□□ 1.99
PXMP4-201ENST00000217398 SLC4A1APQ9BWU0 796 aaKnown RBP27.5■■□□□ 1.99
PXMP4-201ENST00000217398 ASXL1Q8IXJ9 1541 aa27.5■■□□□ 1.99
PXMP4-201ENST00000217398 PRAG1Q86YV5 1406 aa27.5■■□□□ 1.99
PXMP4-201ENST00000217398 RPGRIP1LQ68CZ1 1315 aa27.46■■□□□ 1.99
PXMP4-201ENST00000217398 PTCH1Q13635 1447 aa27.46■■□□□ 1.99
PXMP4-201ENST00000217398 SPATA31A6Q5VVP1 1343 aa27.45■■□□□ 1.99
PXMP4-201ENST00000217398 VGFO15240 615 aaPredicted RBP27.45■■□□□ 1.98
PXMP4-201ENST00000217398 IFT172Q9UG01 1749 aa27.42■■□□□ 1.98
PXMP4-201ENST00000217398 FOXD1Q16676 465 aa27.42■■□□□ 1.98
PXMP4-201ENST00000217398 ROBO2Q9HCK4 1378 aa27.42■■□□□ 1.98
PXMP4-201ENST00000217398 SETD5Q9C0A6 1442 aa27.41■■□□□ 1.98
PXMP4-201ENST00000217398 LAMC1P11047 1609 aa27.4■■□□□ 1.98
PXMP4-201ENST00000217398 SPATA31E1Q6ZUB1 1445 aa27.4■■□□□ 1.98
PXMP4-201ENST00000217398 C1orf167Q5SNV9 1468 aa27.36■■□□□ 1.97
PXMP4-201ENST00000217398 MPHOSPH9Q99550 1183 aa27.34■■□□□ 1.97
PXMP4-201ENST00000217398 CCDC144AA2RUR9 1427 aa27.33■■□□□ 1.97
PXMP4-201ENST00000217398 ADGRF5Q8IZF2 1346 aa27.32■■□□□ 1.96
PXMP4-201ENST00000217398 DDX17Q92841 729 aaKnown RBP27.31■■□□□ 1.96
PXMP4-201ENST00000217398 PNPLA6Q8IY17 1366 aa27.27■■□□□ 1.96
PXMP4-201ENST00000217398 LRRC59Q96AG4 307 aaKnown RBP27.27■■□□□ 1.96
PXMP4-201ENST00000217398 TECPR2O15040 1411 aa27.26■■□□□ 1.95
PXMP4-201ENST00000217398 KNDC1Q76NI1 1749 aa27.26■■□□□ 1.95
PXMP4-201ENST00000217398 CDC42BPGQ6DT37 1551 aa27.26■■□□□ 1.95
PXMP4-201ENST00000217398 ANKRD30BQ9BXX2 1392 aa27.25■■□□□ 1.95
PXMP4-201ENST00000217398 MEX3CQ5U5Q3 659 aaKnown RBP27.24■■□□□ 1.95
PXMP4-201ENST00000217398 ZNF772Q68DY9 489 aaPredicted RBP27.24■■□□□ 1.95
PXMP4-201ENST00000217398 ORAI2Q96SN7 254 aa27.24■■□□□ 1.95
PXMP4-201ENST00000217398 PIK3C2GO75747 1445 aa27.24■■□□□ 1.95
PXMP4-201ENST00000217398 SOS2Q07890 1332 aaPredicted RBP27.23■■□□□ 1.95
PXMP4-201ENST00000217398 RGL3Q3MIN7 710 aa27.23■■□□□ 1.95
PXMP4-201ENST00000217398 NUTM2BA6NNL0 878 aaPredicted RBP27.22■■□□□ 1.95
PXMP4-201ENST00000217398 NUTM2EB1AL46 878 aaPredicted RBP27.22■■□□□ 1.95
PXMP4-201ENST00000217398 NUTM2AQ8IVF1 878 aaPredicted RBP27.22■■□□□ 1.95
PXMP4-201ENST00000217398 LRPPRCP42704 1394 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms