RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 LTBP4Q8N2S1 1624 aa23.7■■□□□ 1.39
POLR2E-201ENST00000215587 STAC3Q96MF2 364 aa23.7■■□□□ 1.38
POLR2E-201ENST00000215587 KDM2AQ9Y2K7 1162 aa23.7■■□□□ 1.38
POLR2E-201ENST00000215587 TMEM131LA2VDJ0 1609 aa23.69■■□□□ 1.38
POLR2E-201ENST00000215587 RPGRIP1LQ68CZ1 1315 aa23.68■■□□□ 1.38
POLR2E-201ENST00000215587 A2ML1A8K2U0 1454 aa23.64■■□□□ 1.38
POLR2E-201ENST00000215587 MYOM2P54296 1465 aa23.64■■□□□ 1.38
POLR2E-201ENST00000215587 KDM5AP29375 1690 aaKnown RBP23.64■■□□□ 1.37
POLR2E-201ENST00000215587 MYO3AQ8NEV4 1616 aa23.63■■□□□ 1.37
POLR2E-201ENST00000215587 IFT172Q9UG01 1749 aa23.63■■□□□ 1.37
POLR2E-201ENST00000215587 PRAG1Q86YV5 1406 aa23.62■■□□□ 1.37
POLR2E-201ENST00000215587 NBPF8Q3BBV2 869 aa23.62■■□□□ 1.37
POLR2E-201ENST00000215587 MYO5BQ9ULV0 1848 aa23.61■■□□□ 1.37
POLR2E-201ENST00000215587 PPLO60437 1756 aa23.6■■□□□ 1.37
POLR2E-201ENST00000215587 NEXMIFQ5QGS0 1516 aa23.6■■□□□ 1.37
POLR2E-201ENST00000215587 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
POLR2E-201ENST00000215587 RALGAPBQ86X10 1494 aa23.57■■□□□ 1.36
POLR2E-201ENST00000215587 VGFO15240 615 aaPredicted RBP23.57■■□□□ 1.36
POLR2E-201ENST00000215587 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
POLR2E-201ENST00000215587 RIMS2Q9UQ26 1411 aa23.56■■□□□ 1.36
POLR2E-201ENST00000215587 ZFYVE9O95405 1425 aa23.55■■□□□ 1.36
POLR2E-201ENST00000215587 NRXN1Q9ULB1 1477 aa23.55■■□□□ 1.36
POLR2E-201ENST00000215587 HDGFP51858 240 aaKnown RBP23.54■■□□□ 1.36
POLR2E-201ENST00000215587 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.54■■□□□ 1.36
POLR2E-201ENST00000215587 ADGRF5Q8IZF2 1346 aa23.54■■□□□ 1.36
POLR2E-201ENST00000215587 ZNF142P52746 1687 aaPredicted RBP23.54■■□□□ 1.36
POLR2E-201ENST00000215587 TRPM1Q7Z4N2 1603 aa23.52■■□□□ 1.36
POLR2E-201ENST00000215587 THEMISQ8N1K5 641 aaPredicted RBP23.52■■□□□ 1.36
POLR2E-201ENST00000215587 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
POLR2E-201ENST00000215587 ROCK2O75116 1388 aaKnown RBP23.5■■□□□ 1.35
POLR2E-201ENST00000215587 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
POLR2E-201ENST00000215587 NUTM2DQ5VT03 806 aaPredicted RBP23.49■■□□□ 1.35
POLR2E-201ENST00000215587 UBAP1LF5GYI3 381 aa23.48■■□□□ 1.35
POLR2E-201ENST00000215587 SLIT1O75093 1534 aa23.48■■□□□ 1.35
POLR2E-201ENST00000215587 KIAA1210Q9ULL0 1709 aa23.47■■□□□ 1.35
POLR2E-201ENST00000215587 ARHGAP23Q9P227 1491 aa23.46■■□□□ 1.35
POLR2E-201ENST00000215587 EID1Q9Y6B2 187 aa23.46■■□□□ 1.35
POLR2E-201ENST00000215587 CARD11Q9BXL7 1154 aa23.45■■□□□ 1.34
POLR2E-201ENST00000215587 GPRASP1Q5JY77 1395 aa23.44■■□□□ 1.34
POLR2E-201ENST00000215587 LAMC1P11047 1609 aa23.44■■□□□ 1.34
POLR2E-201ENST00000215587 EIF4G2P78344 907 aaKnown RBP eCLIP23.42■■□□□ 1.34
POLR2E-201ENST00000215587 CFAP70Q5T0N1 1121 aa23.42■■□□□ 1.34
POLR2E-201ENST00000215587 ZNF335Q9H4Z2 1342 aaPredicted RBP23.41■■□□□ 1.34
POLR2E-201ENST00000215587 NBPF1Q3BBV0 1214 aa23.41■■□□□ 1.34
POLR2E-201ENST00000215587 C14orf93Q9H972 538 aaKnown RBP23.41■■□□□ 1.34
POLR2E-201ENST00000215587 TXNDC2Q86VQ3 553 aa23.4■■□□□ 1.34
POLR2E-201ENST00000215587 SCAF11Q99590 1463 aaKnown RBP23.39■■□□□ 1.34
POLR2E-201ENST00000215587 SETBP1Q9Y6X0 1596 aa23.39■■□□□ 1.33
POLR2E-201ENST00000215587 USP47Q96K76 1375 aa23.39■■□□□ 1.33
POLR2E-201ENST00000215587 PLEKHG1Q9ULL1 1385 aa23.39■■□□□ 1.33
POLR2E-201ENST00000215587 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
POLR2E-201ENST00000215587 LTKP29376 864 aa23.37■■□□□ 1.33
POLR2E-201ENST00000215587 BCANQ96GW7 911 aa23.37■■□□□ 1.33
POLR2E-201ENST00000215587 MED1Q15648 1581 aaPredicted RBP23.36■■□□□ 1.33
POLR2E-201ENST00000215587 HSPA5P11021 654 aaKnown RBP23.36■■□□□ 1.33
POLR2E-201ENST00000215587 ALKQ9UM73 1620 aa23.36■■□□□ 1.33
POLR2E-201ENST00000215587 NCKAP5LQ9HCH0 1330 aa23.35■■□□□ 1.33
POLR2E-201ENST00000215587 ANKLE2Q86XL3 938 aa23.35■■□□□ 1.33
POLR2E-201ENST00000215587 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
POLR2E-201ENST00000215587 IQGAP1P46940 1657 aa23.32■■□□□ 1.32
POLR2E-201ENST00000215587 ADGRB1O14514 1584 aa23.32■■□□□ 1.32
POLR2E-201ENST00000215587 NRXN3Q9Y4C0 1643 aa23.32■■□□□ 1.32
POLR2E-201ENST00000215587 EIF3AQ14152 1382 aaKnown RBP23.31■■□□□ 1.32
POLR2E-201ENST00000215587 ASXL1Q8IXJ9 1541 aa23.28■■□□□ 1.32
POLR2E-201ENST00000215587 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
POLR2E-201ENST00000215587 HIRIP3Q9BW71 556 aaPredicted RBP23.28■■□□□ 1.32
POLR2E-201ENST00000215587 DIP2AQ14689 1571 aa23.27■■□□□ 1.32
POLR2E-201ENST00000215587 ADAMTS13Q76LX8 1427 aa23.27■■□□□ 1.32
POLR2E-201ENST00000215587 HSPA1LP34931 641 aa23.27■■□□□ 1.32
POLR2E-201ENST00000215587 SETD1AO15047 1707 aaKnown RBP23.27■■□□□ 1.32
POLR2E-201ENST00000215587 POLR1AO95602 1720 aaPredicted RBP23.25■■□□□ 1.31
POLR2E-201ENST00000215587 ST20-MTHFSA0A0A6YYL1 179 aa23.24■■□□□ 1.31
POLR2E-201ENST00000215587 YTHDC2Q9H6S0 1430 aaKnown RBP23.24■■□□□ 1.31
POLR2E-201ENST00000215587 MED14O60244 1454 aa23.24■■□□□ 1.31
POLR2E-201ENST00000215587 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
POLR2E-201ENST00000215587 NPHP4O75161 1426 aaPredicted RBP23.23■■□□□ 1.31
POLR2E-201ENST00000215587 SLC26A8Q96RN1 970 aa23.22■■□□□ 1.31
POLR2E-201ENST00000215587 TRAK1Q9UPV9 953 aa23.22■■□□□ 1.31
POLR2E-201ENST00000215587 TBX22Q9Y458 520 aa23.22■■□□□ 1.31
POLR2E-201ENST00000215587 LRPPRCP42704 1394 aaKnown RBP23.22■■□□□ 1.31
POLR2E-201ENST00000215587 METP08581 1390 aa23.21■■□□□ 1.31
POLR2E-201ENST00000215587 TOM1O60784 492 aa23.2■■□□□ 1.3
POLR2E-201ENST00000215587 PIP4K2BP78356 416 aa23.2■■□□□ 1.3
POLR2E-201ENST00000215587 STK26Q9P289 416 aa23.2■■□□□ 1.3
POLR2E-201ENST00000215587 PHF23Q9BUL5 403 aaPredicted RBP23.18■■□□□ 1.3
POLR2E-201ENST00000215587 CPS1P31327 1500 aa23.18■■□□□ 1.3
POLR2E-201ENST00000215587 ABCC11Q96J66 1382 aa23.17■■□□□ 1.3
POLR2E-201ENST00000215587 CENPJQ9HC77 1338 aaPredicted RBP23.17■■□□□ 1.3
POLR2E-201ENST00000215587 DLC1Q96QB1 1528 aa23.17■■□□□ 1.3
POLR2E-201ENST00000215587 ARHGEF28Q8N1W1 1705 aaKnown RBP23.16■■□□□ 1.3
POLR2E-201ENST00000215587 PIK3R4Q99570 1358 aa23.15■■□□□ 1.3
POLR2E-201ENST00000215587 KNDC1Q76NI1 1749 aa23.14■■□□□ 1.3
POLR2E-201ENST00000215587 SLC24A1O60721 1099 aa23.14■■□□□ 1.29
POLR2E-201ENST00000215587 TECPR2O15040 1411 aa23.14■■□□□ 1.29
POLR2E-201ENST00000215587 TESK2Q96S53 571 aa23.13■■□□□ 1.29
POLR2E-201ENST00000215587 POGKQ9P215 609 aa23.12■■□□□ 1.29
POLR2E-201ENST00000215587 SBNO2Q9Y2G9 1366 aa23.12■■□□□ 1.29
POLR2E-201ENST00000215587 TMF1P82094 1093 aa23.11■■□□□ 1.29
POLR2E-201ENST00000215587 QRICH2Q9H0J4 1663 aa23.11■■□□□ 1.29
POLR2E-201ENST00000215587 PRAM1Q96QH2 718 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms