RNA–Protein interactions for RNA: ENST00000210227.4

PTBP3-201, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2

Gene PTBP3, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-201ENST00000210227 FAM135BQ49AJ0 1406 aa30.29■■■□□ 2.44
PTBP3-201ENST00000210227 KCNA6P17658 529 aa30.28■■■□□ 2.44
PTBP3-201ENST00000210227 SLC52A1Q9NWF4 448 aa30.27■■■□□ 2.44
PTBP3-201ENST00000210227 ZFYVE9O95405 1425 aa30.25■■■□□ 2.43
PTBP3-201ENST00000210227 TMEM131LA2VDJ0 1609 aa30.25■■■□□ 2.43
PTBP3-201ENST00000210227 CHD2O14647 1828 aaKnown RBP30.24■■■□□ 2.43
PTBP3-201ENST00000210227 PROSER2Q86WR7 435 aaPredicted RBP30.22■■■□□ 2.43
PTBP3-201ENST00000210227 E9PCH4 1651 aa30.21■■■□□ 2.43
PTBP3-201ENST00000210227 RBM33Q96EV2 1170 aaKnown RBP30.19■■■□□ 2.42
PTBP3-201ENST00000210227 PLEKHG1Q9ULL1 1385 aa30.18■■■□□ 2.42
PTBP3-201ENST00000210227 RIMS2Q9UQ26 1411 aa30.18■■■□□ 2.42
PTBP3-201ENST00000210227 IQGAP3Q86VI3 1631 aa30.16■■■□□ 2.42
PTBP3-201ENST00000210227 BCANQ96GW7 911 aa30.16■■■□□ 2.42
PTBP3-201ENST00000210227 MSH6P52701 1360 aa30.15■■■□□ 2.42
PTBP3-201ENST00000210227 RGS17Q9UGC6 210 aaPredicted RBP30.14■■■□□ 2.42
PTBP3-201ENST00000210227 PHLPP1O60346 1717 aa30.13■■■□□ 2.41
PTBP3-201ENST00000210227 PPP1R15AO75807 674 aaPredicted RBP30.11■■■□□ 2.41
PTBP3-201ENST00000210227 ROCK1Q13464 1354 aa30.09■■■□□ 2.41
PTBP3-201ENST00000210227 DIP2AQ14689 1571 aa30.09■■■□□ 2.41
PTBP3-201ENST00000210227 HDGFP51858 240 aaKnown RBP30.05■■■□□ 2.4
PTBP3-201ENST00000210227 ADAMTS13Q76LX8 1427 aa30.04■■■□□ 2.4
PTBP3-201ENST00000210227 COL16A1Q07092 1604 aaPredicted RBP30.03■■■□□ 2.4
PTBP3-201ENST00000210227 CHGAP10645 457 aaKnown RBP30.02■■■□□ 2.4
PTBP3-201ENST00000210227 SLAIN2Q9P270 581 aa30.02■■■□□ 2.4
PTBP3-201ENST00000210227 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.01■■■□□ 2.39
PTBP3-201ENST00000210227 TBX22Q9Y458 520 aa30.01■■■□□ 2.39
PTBP3-201ENST00000210227 SIPA1L2Q9P2F8 1722 aaPredicted RBP30■■■□□ 2.39
PTBP3-201ENST00000210227 NCOA3Q9Y6Q9 1424 aa29.99■■■□□ 2.39
PTBP3-201ENST00000210227 TRPM2O94759 1503 aa29.98■■■□□ 2.39
PTBP3-201ENST00000210227 SPHKAPQ2M3C7 1700 aa29.98■■■□□ 2.39
PTBP3-201ENST00000210227 JCADQ9P266 1359 aa29.96■■■□□ 2.39
PTBP3-201ENST00000210227 NUTM2DQ5VT03 806 aaPredicted RBP29.96■■■□□ 2.39
PTBP3-201ENST00000210227 POTEAQ6S8J7 498 aa29.96■■■□□ 2.39
PTBP3-201ENST00000210227 NUP155O75694 1391 aa29.95■■■□□ 2.39
PTBP3-201ENST00000210227 PIK3R4Q99570 1358 aa29.95■■■□□ 2.39
PTBP3-201ENST00000210227 AHDC1Q5TGY3 1603 aaPredicted RBP29.93■■■□□ 2.38
PTBP3-201ENST00000210227 NRXN3Q9Y4C0 1643 aa29.93■■■□□ 2.38
PTBP3-201ENST00000210227 SETD1AO15047 1707 aaKnown RBP29.92■■■□□ 2.38
PTBP3-201ENST00000210227 C14orf37Q86TY3 774 aa29.91■■■□□ 2.38
PTBP3-201ENST00000210227 XRN1Q8IZH2 1706 aaKnown RBP29.91■■■□□ 2.38
PTBP3-201ENST00000210227 SHPRHQ149N8 1683 aa29.89■■■□□ 2.38
PTBP3-201ENST00000210227 ITGAEP38570 1179 aa29.88■■■□□ 2.37
PTBP3-201ENST00000210227 SETBP1Q9Y6X0 1596 aa29.88■■■□□ 2.37
PTBP3-201ENST00000210227 PTPRUQ92729 1446 aa29.88■■■□□ 2.37
PTBP3-201ENST00000210227 LRP6O75581 1613 aa29.85■■■□□ 2.37
PTBP3-201ENST00000210227 CADPS2Q86UW7 1296 aa29.84■■■□□ 2.37
PTBP3-201ENST00000210227 C19orf44Q9H6X5 657 aa29.84■■■□□ 2.37
PTBP3-201ENST00000210227 ATF3P18847 181 aa29.82■■■□□ 2.36
PTBP3-201ENST00000210227 AMOTL2Q9Y2J4 779 aa29.81■■■□□ 2.36
PTBP3-201ENST00000210227 DCCP43146 1447 aa29.8■■■□□ 2.36
PTBP3-201ENST00000210227 CLTCL1P53675 1640 aa29.8■■■□□ 2.36
PTBP3-201ENST00000210227 SPATA31A6Q5VVP1 1343 aa29.79■■■□□ 2.36
PTBP3-201ENST00000210227 ASXL1Q8IXJ9 1541 aa29.76■■■□□ 2.35
PTBP3-201ENST00000210227 NHSL1Q5SYE7 1610 aa29.75■■■□□ 2.35
PTBP3-201ENST00000210227 PPARGC1BQ86YN6 1023 aaKnown RBP29.75■■■□□ 2.35
PTBP3-201ENST00000210227 KIF1BO60333 1816 aa29.75■■■□□ 2.35
PTBP3-201ENST00000210227 NEXMIFQ5QGS0 1516 aa29.75■■■□□ 2.35
PTBP3-201ENST00000210227 NALCNQ8IZF0 1738 aa29.74■■■□□ 2.35
PTBP3-201ENST00000210227 BRINP3Q76B58 766 aa29.73■■■□□ 2.35
PTBP3-201ENST00000210227 ZNF326Q5BKZ1 582 aaKnown RBP29.71■■■□□ 2.35
PTBP3-201ENST00000210227 MEX3CQ5U5Q3 659 aaKnown RBP29.71■■■□□ 2.35
PTBP3-201ENST00000210227 MST1RQ04912 1400 aa29.71■■■□□ 2.35
PTBP3-201ENST00000210227 METP08581 1390 aa29.7■■■□□ 2.35
PTBP3-201ENST00000210227 ADGRL3Q9HAR2 1447 aa29.67■■■□□ 2.34
PTBP3-201ENST00000210227 RRBP1Q9P2E9 1410 aaKnown RBP29.65■■■□□ 2.34
PTBP3-201ENST00000210227 ZNF772Q68DY9 489 aaPredicted RBP29.64■■■□□ 2.34
PTBP3-201ENST00000210227 NAIPQ13075 1403 aa29.63■■■□□ 2.33
PTBP3-201ENST00000210227 SETD5Q9C0A6 1442 aa29.63■■■□□ 2.33
PTBP3-201ENST00000210227 NUTM2BA6NNL0 878 aaPredicted RBP29.57■■■□□ 2.32
PTBP3-201ENST00000210227 NUTM2EB1AL46 878 aaPredicted RBP29.57■■■□□ 2.32
PTBP3-201ENST00000210227 NUTM2AQ8IVF1 878 aaPredicted RBP29.57■■■□□ 2.32
PTBP3-201ENST00000210227 PTCH1Q13635 1447 aa29.55■■■□□ 2.32
PTBP3-201ENST00000210227 PPLO60437 1756 aa29.55■■■□□ 2.32
PTBP3-201ENST00000210227 TRIM52Q96A61 297 aa29.55■■■□□ 2.32
PTBP3-201ENST00000210227 LAMC1P11047 1609 aa29.55■■■□□ 2.32
PTBP3-201ENST00000210227 CDK12Q9NYV4 1490 aaPredicted RBP29.52■■■□□ 2.32
PTBP3-201ENST00000210227 HFM1A2PYH4 1435 aa29.51■■■□□ 2.31
PTBP3-201ENST00000210227 PNPLA6Q8IY17 1366 aa29.51■■■□□ 2.31
PTBP3-201ENST00000210227 AFF2P51816 1311 aa29.5■■■□□ 2.31
PTBP3-201ENST00000210227 DDX17Q92841 729 aaKnown RBP29.5■■■□□ 2.31
PTBP3-201ENST00000210227 LRRC59Q96AG4 307 aaKnown RBP29.5■■■□□ 2.31
PTBP3-201ENST00000210227 C1orf167Q5SNV9 1468 aa29.49■■■□□ 2.31
PTBP3-201ENST00000210227 PRAG1Q86YV5 1406 aa29.49■■■□□ 2.31
PTBP3-201ENST00000210227 RXRBP28702 533 aa29.48■■■□□ 2.31
PTBP3-201ENST00000210227 ROBO2Q9HCK4 1378 aa29.48■■■□□ 2.31
PTBP3-201ENST00000210227 UPF1Q92900 1129 aaKnown RBP eCLIP29.46■■■□□ 2.31
PTBP3-201ENST00000210227 VGFO15240 615 aaPredicted RBP29.45■■■□□ 2.31
PTBP3-201ENST00000210227 C8orf37Q96NL8 207 aa29.41■■■□□ 2.3
PTBP3-201ENST00000210227 RPGRIP1LQ68CZ1 1315 aa29.4■■■□□ 2.3
PTBP3-201ENST00000210227 RGS12O14924 1447 aa29.39■■■□□ 2.3
PTBP3-201ENST00000210227 SLC4A1APQ9BWU0 796 aaKnown RBP29.39■■■□□ 2.3
PTBP3-201ENST00000210227 CDC42BPGQ6DT37 1551 aa29.39■■■□□ 2.29
PTBP3-201ENST00000210227 COL22A1Q8NFW1 1626 aaPredicted RBP29.37■■■□□ 2.29
PTBP3-201ENST00000210227 IFT172Q9UG01 1749 aa29.37■■■□□ 2.29
PTBP3-201ENST00000210227 ORAI2Q96SN7 254 aa29.35■■■□□ 2.29
PTBP3-201ENST00000210227 SOS2Q07890 1332 aaPredicted RBP29.34■■■□□ 2.29
PTBP3-201ENST00000210227 ADAMTS2O95450 1211 aa29.31■■■□□ 2.28
PTBP3-201ENST00000210227 RBM6P78332 1123 aaKnown RBP29.31■■■□□ 2.28
PTBP3-201ENST00000210227 QTRT2Q9H974 415 aaKnown RBP29.31■■■□□ 2.28
PTBP3-201ENST00000210227 KNDC1Q76NI1 1749 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms