RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 GOLGA2Q08379 1002 aa14.64□□□□□ -0.07
DNMT3B-201ENST00000201963 MIA2Q96PC5 1412 aa14.64□□□□□ -0.07
DNMT3B-201ENST00000201963 RRBP1Q9P2E9 1410 aaKnown RBP14.64□□□□□ -0.07
DNMT3B-201ENST00000201963 MYBBP1AQ9BQG0 1328 aaKnown RBP14.64□□□□□ -0.07
DNMT3B-201ENST00000201963 CENPQQ7L2Z9 268 aaPredicted RBP14.64□□□□□ -0.07
DNMT3B-201ENST00000201963 DAPK1P53355 1430 aa14.63□□□□□ -0.07
DNMT3B-201ENST00000201963 CNTLNQ9NXG0 1405 aa14.63□□□□□ -0.07
DNMT3B-201ENST00000201963 PLCB2Q00722 1185 aa14.62□□□□□ -0.07
DNMT3B-201ENST00000201963 SUPT6HQ7KZ85 1726 aaKnown RBP14.62□□□□□ -0.07
DNMT3B-201ENST00000201963 MFAP1P55081 439 aaKnown RBP14.61□□□□□ -0.07
DNMT3B-201ENST00000201963 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
DNMT3B-201ENST00000201963 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
DNMT3B-201ENST00000201963 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
DNMT3B-201ENST00000201963 ROCK2O75116 1388 aaKnown RBP14.61□□□□□ -0.07
DNMT3B-201ENST00000201963 CLUAP1Q96AJ1 413 aa14.61□□□□□ -0.07
DNMT3B-201ENST00000201963 CCDC146Q8IYE0 955 aa14.61□□□□□ -0.07
DNMT3B-201ENST00000201963 ATF3P18847 181 aa14.6□□□□□ -0.07
DNMT3B-201ENST00000201963 IDI1Q13907 227 aa14.6□□□□□ -0.07
DNMT3B-201ENST00000201963 FRAT2O75474 233 aaPredicted RBP14.59□□□□□ -0.07
DNMT3B-201ENST00000201963 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.59□□□□□ -0.07
DNMT3B-201ENST00000201963 CFAP70Q5T0N1 1121 aa14.58□□□□□ -0.07
DNMT3B-201ENST00000201963 GBP4Q96PP9 640 aa14.58□□□□□ -0.08
DNMT3B-201ENST00000201963 ABCC5O15440 1437 aa14.58□□□□□ -0.08
DNMT3B-201ENST00000201963 USP47Q96K76 1375 aa14.58□□□□□ -0.08
DNMT3B-201ENST00000201963 BACH2Q9BYV9 841 aa14.58□□□□□ -0.08
DNMT3B-201ENST00000201963 SYCP2Q9BX26 1530 aa14.57□□□□□ -0.08
DNMT3B-201ENST00000201963 SLC52A1Q9NWF4 448 aa14.57□□□□□ -0.08
DNMT3B-201ENST00000201963 RWDD1Q9H446 243 aaPredicted RBP14.56□□□□□ -0.08
DNMT3B-201ENST00000201963 CDCA7LQ96GN5 454 aa14.56□□□□□ -0.08
DNMT3B-201ENST00000201963 U2SURPO15042 1029 aaKnown RBP14.56□□□□□ -0.08
DNMT3B-201ENST00000201963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.56□□□□□ -0.08
DNMT3B-201ENST00000201963 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
DNMT3B-201ENST00000201963 MAPK8IP3Q9UPT6 1336 aa14.55□□□□□ -0.08
DNMT3B-201ENST00000201963 ZNF518AQ6AHZ1 1483 aa14.54□□□□□ -0.08
DNMT3B-201ENST00000201963 CSB-PGBD3P0DP91 1061 aa14.54□□□□□ -0.08
DNMT3B-201ENST00000201963 DHX29Q7Z478 1369 aaKnown RBP14.54□□□□□ -0.08
DNMT3B-201ENST00000201963 PMFBP1Q8TBY8 1022 aa14.53□□□□□ -0.08
DNMT3B-201ENST00000201963 NUTM2GQ5VZR2 741 aa14.52□□□□□ -0.08
DNMT3B-201ENST00000201963 PANK3Q9H999 370 aa14.52□□□□□ -0.08
DNMT3B-201ENST00000201963 COG6Q9Y2V7 657 aa14.52□□□□□ -0.09
DNMT3B-201ENST00000201963 YEATS2Q9ULM3 1422 aa14.52□□□□□ -0.09
DNMT3B-201ENST00000201963 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
DNMT3B-201ENST00000201963 MEX3CQ5U5Q3 659 aaKnown RBP14.51□□□□□ -0.09
DNMT3B-201ENST00000201963 LTV1Q96GA3 475 aaPredicted RBP14.51□□□□□ -0.09
DNMT3B-201ENST00000201963 CENPJQ9HC77 1338 aaPredicted RBP14.51□□□□□ -0.09
DNMT3B-201ENST00000201963 KDM5BQ9UGL1 1544 aa14.51□□□□□ -0.09
DNMT3B-201ENST00000201963 NUTM2BA6NNL0 878 aaPredicted RBP14.51□□□□□ -0.09
DNMT3B-201ENST00000201963 NUTM2EB1AL46 878 aaPredicted RBP14.51□□□□□ -0.09
DNMT3B-201ENST00000201963 XPCQ01831 940 aaPredicted RBP14.51□□□□□ -0.09
DNMT3B-201ENST00000201963 CASC1Q6TDU7 716 aa14.51□□□□□ -0.09
DNMT3B-201ENST00000201963 NUTM2AQ8IVF1 878 aaPredicted RBP14.51□□□□□ -0.09
DNMT3B-201ENST00000201963 A2MP01023 1474 aa14.5□□□□□ -0.09
DNMT3B-201ENST00000201963 BCL2L13Q9BXK5 485 aa14.5□□□□□ -0.09
DNMT3B-201ENST00000201963 MORC1Q86VD1 984 aa14.5□□□□□ -0.09
DNMT3B-201ENST00000201963 NCKAP5LQ9HCH0 1330 aa14.5□□□□□ -0.09
DNMT3B-201ENST00000201963 ABCC10Q5T3U5 1492 aa14.49□□□□□ -0.09
DNMT3B-201ENST00000201963 PSME1Q06323 249 aa14.49□□□□□ -0.09
DNMT3B-201ENST00000201963 ESCO1Q5FWF5 840 aa14.49□□□□□ -0.09
DNMT3B-201ENST00000201963 HDGFL2Q7Z4V5 671 aaPredicted RBP14.49□□□□□ -0.09
DNMT3B-201ENST00000201963 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
DNMT3B-201ENST00000201963 CLASP1Q7Z460 1538 aa14.49□□□□□ -0.09
DNMT3B-201ENST00000201963 ITPRIPQ8IWB1 547 aa14.49□□□□□ -0.09
DNMT3B-201ENST00000201963 SKAP1Q86WV1 359 aa14.48□□□□□ -0.09
DNMT3B-201ENST00000201963 PNISRQ8TF01 805 aaKnown RBP14.48□□□□□ -0.09
DNMT3B-201ENST00000201963 NBPF8Q3BBV2 869 aa14.47□□□□□ -0.09
DNMT3B-201ENST00000201963 TNRQ92752 1358 aa14.47□□□□□ -0.09
DNMT3B-201ENST00000201963 PTPN23Q9H3S7 1636 aa14.47□□□□□ -0.09
DNMT3B-201ENST00000201963 APAF1O14727 1248 aa14.46□□□□□ -0.09
DNMT3B-201ENST00000201963 PHF23Q9BUL5 403 aaPredicted RBP14.46□□□□□ -0.09
DNMT3B-201ENST00000201963 SMG6Q86US8 1419 aaKnown RBP14.46□□□□□ -0.09
DNMT3B-201ENST00000201963 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.09
DNMT3B-201ENST00000201963 PRAM1Q96QH2 718 aa14.46□□□□□ -0.09
DNMT3B-201ENST00000201963 ZMYM3Q14202 1370 aa14.46□□□□□ -0.09
DNMT3B-201ENST00000201963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.46□□□□□ -0.09
DNMT3B-201ENST00000201963 UBAP1LF5GYI3 381 aa14.46□□□□□ -0.1
DNMT3B-201ENST00000201963 FAM43AQ8N2R8 423 aa14.46□□□□□ -0.1
DNMT3B-201ENST00000201963 DDX11L8A8MPP1 907 aa14.45□□□□□ -0.1
DNMT3B-201ENST00000201963 PKNOX2Q96KN3 472 aa14.45□□□□□ -0.1
DNMT3B-201ENST00000201963 RRP7AQ9Y3A4 280 aaKnown RBP14.45□□□□□ -0.1
DNMT3B-201ENST00000201963 U2AF1L5P0DN76 240 aaPredicted RBP14.45□□□□□ -0.1
DNMT3B-201ENST00000201963 U2AF1Q01081 240 aaKnown RBP eCLIP14.45□□□□□ -0.16e-10■■■■□ 19.3
DNMT3B-201ENST00000201963 CALD1Q05682 793 aaKnown RBP14.45□□□□□ -0.1
DNMT3B-201ENST00000201963 NBPF1Q3BBV0 1214 aa14.45□□□□□ -0.1
DNMT3B-201ENST00000201963 C11orf95C9JLR9 678 aaPredicted RBP14.45□□□□□ -0.1
DNMT3B-201ENST00000201963 ABCA8O94911 1581 aa14.45□□□□□ -0.1
DNMT3B-201ENST00000201963 UHRF1BP1LA0JNW5 1464 aa14.44□□□□□ -0.1
DNMT3B-201ENST00000201963 APBB1O00213 710 aa14.44□□□□□ -0.1
DNMT3B-201ENST00000201963 CGNL1Q0VF96 1302 aa14.44□□□□□ -0.1
DNMT3B-201ENST00000201963 SAMD9Q5K651 1589 aa14.44□□□□□ -0.1
DNMT3B-201ENST00000201963 NAIPQ13075 1403 aa14.43□□□□□ -0.1
DNMT3B-201ENST00000201963 WAPLQ7Z5K2 1190 aa14.43□□□□□ -0.1
DNMT3B-201ENST00000201963 CABP2Q9NPB3 220 aa14.43□□□□□ -0.1
DNMT3B-201ENST00000201963 SMC4Q9NTJ3 1288 aa14.43□□□□□ -0.1
DNMT3B-201ENST00000201963 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
DNMT3B-201ENST00000201963 ERBINQ96RT1 1412 aa14.43□□□□□ -0.1
DNMT3B-201ENST00000201963 PTMSP20962 102 aa14.43□□□□□ -0.1
DNMT3B-201ENST00000201963 CDK11BP21127 795 aaKnown RBP14.43□□□□□ -0.1
DNMT3B-201ENST00000201963 DDX49Q9Y6V7 483 aaKnown RBP14.43□□□□□ -0.1
DNMT3B-201ENST00000201963 CHMP4BQ9H444 224 aaKnown RBP14.42□□□□□ -0.1
DNMT3B-201ENST00000201963 CHMP5Q9NZZ3 219 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms