RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 NECTIN2Q92692 538 aa14.8□□□□□ -0.04
TRO-201ENST00000173898 SF3A1Q15459 793 aaKnown RBP14.8□□□□□ -0.04
TRO-201ENST00000173898 LNPKQ9C0E8 428 aa14.8□□□□□ -0.04
TRO-201ENST00000173898 C1orf141Q5JVX7 400 aa14.8□□□□□ -0.04
TRO-201ENST00000173898 TMEM132EQ6IEE7 984 aa14.8□□□□□ -0.04
TRO-201ENST00000173898 MIA2Q96PC5 1412 aa14.79□□□□□ -0.04
TRO-201ENST00000173898 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
TRO-201ENST00000173898 CUX1P39880 1505 aa14.79□□□□□ -0.04
TRO-201ENST00000173898 AQRO60306 1485 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRO-201ENST00000173898 SKOR2Q2VWA4 1001 aaPredicted RBP14.79□□□□□ -0.04
TRO-201ENST00000173898 HMOX1P09601 288 aa14.79□□□□□ -0.04
TRO-201ENST00000173898 CLSTN1O94985 981 aa14.78□□□□□ -0.04
TRO-201ENST00000173898 DIAPH3Q9NSV4 1193 aa14.78□□□□□ -0.04
TRO-201ENST00000173898 AFAP1Q8N556 730 aa14.78□□□□□ -0.04
TRO-201ENST00000173898 C9orf78Q9NZ63 289 aaPredicted RBP14.78□□□□□ -0.04
TRO-201ENST00000173898 RRBP1Q9P2E9 1410 aaKnown RBP14.78□□□□□ -0.04
TRO-201ENST00000173898 MTHFSP49914 203 aa14.78□□□□□ -0.04
TRO-201ENST00000173898 CHMP5Q9NZZ3 219 aa14.78□□□□□ -0.04
TRO-201ENST00000173898 ATP6V1DQ9Y5K8 247 aa14.78□□□□□ -0.04
TRO-201ENST00000173898 FKBP5Q13451 457 aaPredicted RBP14.77□□□□□ -0.04
TRO-201ENST00000173898 CFAP70Q5T0N1 1121 aa14.77□□□□□ -0.04
TRO-201ENST00000173898 NBPF1Q3BBV0 1214 aa14.77□□□□□ -0.05
TRO-201ENST00000173898 FYCO1Q9BQS8 1478 aa14.77□□□□□ -0.05
TRO-201ENST00000173898 GTF2E1P29083 439 aaPredicted RBP14.77□□□□□ -0.05
TRO-201ENST00000173898 GNAI1P63096 354 aa14.77□□□□□ -0.05
TRO-201ENST00000173898 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
TRO-201ENST00000173898 NBPF8Q3BBV2 869 aa14.76□□□□□ -0.05
TRO-201ENST00000173898 H3BQV1 296 aa14.76□□□□□ -0.05
TRO-201ENST00000173898 FRAT2O75474 233 aaPredicted RBP14.76□□□□□ -0.05
TRO-201ENST00000173898 NEXNQ0ZGT2 675 aa14.76□□□□□ -0.05
TRO-201ENST00000173898 IFFO2Q5TF58 517 aa14.76□□□□□ -0.05
TRO-201ENST00000173898 TCP11L2Q8N4U5 519 aa14.76□□□□□ -0.05
TRO-201ENST00000173898 CABP2Q9NPB3 220 aa14.76□□□□□ -0.05
TRO-201ENST00000173898 FAM184AQ8NB25 1140 aa14.76□□□□□ -0.05
TRO-201ENST00000173898 RASSF8Q8NHQ8 419 aa14.75□□□□□ -0.05
TRO-201ENST00000173898 ANO2Q9NQ90 1003 aa14.75□□□□□ -0.05
TRO-201ENST00000173898 OSCARQ8IYS5 282 aa14.74□□□□□ -0.05
TRO-201ENST00000173898 ZKSCAN1P17029 563 aaPredicted RBP14.74□□□□□ -0.05
TRO-201ENST00000173898 RUFY2Q8WXA3 655 aa14.74□□□□□ -0.05
TRO-201ENST00000173898 C22orf23Q9BZE7 217 aa14.74□□□□□ -0.05
TRO-201ENST00000173898 CFTRP13569 1480 aa14.74□□□□□ -0.05
TRO-201ENST00000173898 CREBRFQ8IUR6 639 aa14.73□□□□□ -0.05
TRO-201ENST00000173898 PPP2R1AP30153 589 aa14.73□□□□□ -0.05
TRO-201ENST00000173898 IFIT2P09913 472 aaKnown RBP14.72□□□□□ -0.05
TRO-201ENST00000173898 AAMPQ13685 434 aa14.72□□□□□ -0.05
TRO-201ENST00000173898 TTC5Q8N0Z6 440 aa14.72□□□□□ -0.05
TRO-201ENST00000173898 TSPYL4Q9UJ04 414 aa14.72□□□□□ -0.05
TRO-201ENST00000173898 NFKBIBQ15653 356 aa14.71□□□□□ -0.06
TRO-201ENST00000173898 AMER1Q5JTC6 1135 aaPredicted RBP14.7□□□□□ -0.06
TRO-201ENST00000173898 BECN2A8MW95 431 aa14.7□□□□□ -0.06
TRO-201ENST00000173898 MCTP1Q6DN14 999 aa14.7□□□□□ -0.06
TRO-201ENST00000173898 INTS3Q68E01 1043 aaKnown RBP14.7□□□□□ -0.06
TRO-201ENST00000173898 ROCK1Q13464 1354 aa14.7□□□□□ -0.06
TRO-201ENST00000173898 GOLGA6L19H0YKK7 550 aa14.7□□□□□ -0.06
TRO-201ENST00000173898 PNISRQ8TF01 805 aaKnown RBP14.7□□□□□ -0.06
TRO-201ENST00000173898 TMX4Q9H1E5 349 aaPredicted RBP14.69□□□□□ -0.06
TRO-201ENST00000173898 PSME1Q06323 249 aa14.69□□□□□ -0.06
TRO-201ENST00000173898 ERICH3Q5RHP9 1530 aa14.69□□□□□ -0.06
TRO-201ENST00000173898 CHMP4CQ96CF2 233 aa14.69□□□□□ -0.06
TRO-201ENST00000173898 CCDC184Q52MB2 194 aa14.68□□□□□ -0.06
TRO-201ENST00000173898 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.68□□□□□ -0.06
TRO-201ENST00000173898 DDX58O95786 925 aaKnown RBP14.68□□□□□ -0.06
TRO-201ENST00000173898 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
TRO-201ENST00000173898 G3BP1Q13283 466 aaKnown RBP eCLIP14.67□□□□□ -0.06
TRO-201ENST00000173898 SLC12A5Q9H2X9 1139 aa14.67□□□□□ -0.06
TRO-201ENST00000173898 FAM69CQ0P6D2 419 aa14.67□□□□□ -0.06
TRO-201ENST00000173898 CPLX2Q6PUV4 134 aaKnown RBP14.67□□□□□ -0.06
TRO-201ENST00000173898 NUCB2P80303 420 aa14.67□□□□□ -0.06
TRO-201ENST00000173898 HSP90AA2PQ14568 343 aaPredicted RBP14.67□□□□□ -0.06
TRO-201ENST00000173898 RSPH6AQ9H0K4 717 aa14.67□□□□□ -0.06
TRO-201ENST00000173898 EXOSC9Q06265 439 aaKnown RBP14.66□□□□□ -0.06
TRO-201ENST00000173898 SYNJ1O43426 1573 aa14.66□□□□□ -0.06
TRO-201ENST00000173898 EVA1CP58658 441 aa14.66□□□□□ -0.06
TRO-201ENST00000173898 LRRFIP1Q32MZ4 808 aaKnown RBP14.66□□□□□ -0.06
TRO-201ENST00000173898 VPS37CA5D8V6 355 aaPredicted RBP14.65□□□□□ -0.06
TRO-201ENST00000173898 PRKAR2BP31323 418 aa14.65□□□□□ -0.06
TRO-201ENST00000173898 BCAR3O75815 825 aa14.65□□□□□ -0.06
TRO-201ENST00000173898 RNF20Q5VTR2 975 aa14.65□□□□□ -0.06
TRO-201ENST00000173898 AKNAQ7Z591 1439 aa14.65□□□□□ -0.06
TRO-201ENST00000173898 HFM1A2PYH4 1435 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 G3V3G9 751 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 NLRP6P59044 892 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 AKAP17AQ02040 695 aaKnown RBP14.64□□□□□ -0.07
TRO-201ENST00000173898 HSP90AB4PQ58FF6 505 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 DCAF8Q5TAQ9 597 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 NUTM2GQ5VZR2 741 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 PDE3AQ14432 1141 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 KIAA1107Q9UPP5 1409 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 PES1O00541 588 aaKnown RBP14.64□□□□□ -0.07
TRO-201ENST00000173898 CDC45O75419 566 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 TPM3P06753 285 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 PDZRN3Q9UPQ7 1066 aa14.64□□□□□ -0.07
TRO-201ENST00000173898 CPLX1O14810 134 aa14.63□□□□□ -0.07
TRO-201ENST00000173898 SYNE3Q6ZMZ3 975 aa14.63□□□□□ -0.07
TRO-201ENST00000173898 NOC3LQ8WTT2 800 aaKnown RBP14.63□□□□□ -0.07
TRO-201ENST00000173898 SMC3Q9UQE7 1217 aa14.63□□□□□ -0.07
TRO-201ENST00000173898 GRIN2BQ13224 1484 aa14.63□□□□□ -0.07
TRO-201ENST00000173898 APPP05067 770 aa14.63□□□□□ -0.07
TRO-201ENST00000173898 MARCH6O60337 910 aa14.62□□□□□ -0.07
TRO-201ENST00000173898 BICD2Q8TD16 824 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms