RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 AEBP2Q6ZN18 517 aaPredicted RBP13.66□□□□□ -0.22
CX3CL1-201ENST00000006053 APAF1O14727 1248 aa13.65□□□□□ -0.22
CX3CL1-201ENST00000006053 SLFN5Q08AF3 891 aa13.65□□□□□ -0.22
CX3CL1-201ENST00000006053 CDC42BPBQ9Y5S2 1711 aa13.65□□□□□ -0.22
CX3CL1-201ENST00000006053 BCAR3O75815 825 aa13.64□□□□□ -0.23
CX3CL1-201ENST00000006053 FRAT1Q92837 279 aaPredicted RBP13.64□□□□□ -0.23
CX3CL1-201ENST00000006053 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
CX3CL1-201ENST00000006053 ZNF521Q96K83 1311 aa13.63□□□□□ -0.23
CX3CL1-201ENST00000006053 WDR7Q9Y4E6 1490 aa13.63□□□□□ -0.23
CX3CL1-201ENST00000006053 CDCA8Q53HL2 280 aa13.63□□□□□ -0.23
CX3CL1-201ENST00000006053 EIF2AK4Q9P2K8 1649 aaKnown RBP13.63□□□□□ -0.23
CX3CL1-201ENST00000006053 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
CX3CL1-201ENST00000006053 PREX2Q70Z35 1606 aa13.62□□□□□ -0.23
CX3CL1-201ENST00000006053 FRAT2O75474 233 aaPredicted RBP13.62□□□□□ -0.23
CX3CL1-201ENST00000006053 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
CX3CL1-201ENST00000006053 GLIPR1L2Q4G1C9 344 aa13.61□□□□□ -0.23
CX3CL1-201ENST00000006053 UNC13BO14795 1591 aa13.61□□□□□ -0.23
CX3CL1-201ENST00000006053 LAMC1P11047 1609 aa13.61□□□□□ -0.23
CX3CL1-201ENST00000006053 CANXP27824 592 aaKnown RBP13.6□□□□□ -0.23
CX3CL1-201ENST00000006053 ZMYND15Q9H091 742 aa13.59□□□□□ -0.23
CX3CL1-201ENST00000006053 IGHDP01880 384 aa13.58□□□□□ -0.24
CX3CL1-201ENST00000006053 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
CX3CL1-201ENST00000006053 IQGAP3Q86VI3 1631 aa13.58□□□□□ -0.24
CX3CL1-201ENST00000006053 TTC37Q6PGP7 1564 aa13.58□□□□□ -0.24
CX3CL1-201ENST00000006053 SENP3Q9H4L4 574 aaPredicted RBP13.57□□□□□ -0.24
CX3CL1-201ENST00000006053 E9PSI1 815 aa13.57□□□□□ -0.24
CX3CL1-201ENST00000006053 NEUROD2Q15784 382 aa13.57□□□□□ -0.24
CX3CL1-201ENST00000006053 COG6Q9Y2V7 657 aa13.57□□□□□ -0.24
CX3CL1-201ENST00000006053 ASXL1Q8IXJ9 1541 aa13.56□□□□□ -0.24
CX3CL1-201ENST00000006053 TRMT2AQ8IZ69 625 aaKnown RBP13.56□□□□□ -0.24
CX3CL1-201ENST00000006053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.56□□□□□ -0.24
CX3CL1-201ENST00000006053 NKTRP30414 1462 aaKnown RBP13.56□□□□□ -0.24
CX3CL1-201ENST00000006053 PANK1Q8TE04 598 aa13.56□□□□□ -0.24
CX3CL1-201ENST00000006053 DUOX2Q9NRD8 1548 aa13.56□□□□□ -0.24
CX3CL1-201ENST00000006053 CYB5RLQ6IPT4 315 aa13.56□□□□□ -0.24
CX3CL1-201ENST00000006053 PIK3C2GO75747 1445 aa13.55□□□□□ -0.24
CX3CL1-201ENST00000006053 ATP10AO60312 1499 aa13.55□□□□□ -0.24
CX3CL1-201ENST00000006053 MAST1Q9Y2H9 1570 aa13.55□□□□□ -0.24
CX3CL1-201ENST00000006053 SCAF11Q99590 1463 aaKnown RBP13.55□□□□□ -0.24
CX3CL1-201ENST00000006053 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
CX3CL1-201ENST00000006053 EFCAB2Q5VUJ9 269 aa13.54□□□□□ -0.24
CX3CL1-201ENST00000006053 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
CX3CL1-201ENST00000006053 EIF3AQ14152 1382 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-201ENST00000006053 TNNT2P45379 298 aaPredicted RBP13.54□□□□□ -0.24
CX3CL1-201ENST00000006053 CENPJQ9HC77 1338 aaPredicted RBP13.53□□□□□ -0.24
CX3CL1-201ENST00000006053 RNF17Q9BXT8 1623 aaKnown RBP13.53□□□□□ -0.24
CX3CL1-201ENST00000006053 SEC24BO95487 1268 aa13.53□□□□□ -0.24
CX3CL1-201ENST00000006053 CFAP70Q5T0N1 1121 aa13.53□□□□□ -0.24
CX3CL1-201ENST00000006053 AFAP1Q8N556 730 aa13.52□□□□□ -0.24
CX3CL1-201ENST00000006053 SLKQ9H2G2 1235 aaPredicted RBP13.52□□□□□ -0.24
CX3CL1-201ENST00000006053 RRP7AQ9Y3A4 280 aaKnown RBP13.52□□□□□ -0.24
CX3CL1-201ENST00000006053 CLUAP1Q96AJ1 413 aa13.52□□□□□ -0.24
CX3CL1-201ENST00000006053 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
CX3CL1-201ENST00000006053 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
CX3CL1-201ENST00000006053 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.25
CX3CL1-201ENST00000006053 SYNMO15061 1565 aa13.51□□□□□ -0.25
CX3CL1-201ENST00000006053 CARD14Q9BXL6 1004 aa13.51□□□□□ -0.25
CX3CL1-201ENST00000006053 MADDQ8WXG6 1647 aa13.51□□□□□ -0.25
CX3CL1-201ENST00000006053 TRAPPC8Q9Y2L5 1435 aa13.5□□□□□ -0.25
CX3CL1-201ENST00000006053 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
CX3CL1-201ENST00000006053 PDE3AQ14432 1141 aa13.5□□□□□ -0.25
CX3CL1-201ENST00000006053 WWC1Q8IX03 1113 aa13.5□□□□□ -0.25
CX3CL1-201ENST00000006053 USP19O94966 1318 aa13.5□□□□□ -0.25
CX3CL1-201ENST00000006053 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
CX3CL1-201ENST00000006053 BCL2L13Q9BXK5 485 aa13.49□□□□□ -0.25
CX3CL1-201ENST00000006053 IQGAP1P46940 1657 aa13.49□□□□□ -0.25
CX3CL1-201ENST00000006053 NPC1L1Q9UHC9 1359 aa13.49□□□□□ -0.25
CX3CL1-201ENST00000006053 BECN1Q14457 450 aa13.49□□□□□ -0.25
CX3CL1-201ENST00000006053 RSPH6AQ9H0K4 717 aa13.48□□□□□ -0.25
CX3CL1-201ENST00000006053 MAPK8IP3Q9UPT6 1336 aa13.48□□□□□ -0.25
CX3CL1-201ENST00000006053 ABCC2Q92887 1545 aa13.48□□□□□ -0.25
CX3CL1-201ENST00000006053 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
CX3CL1-201ENST00000006053 SCAPERQ9BY12 1400 aa13.47□□□□□ -0.25
CX3CL1-201ENST00000006053 STAC3Q96MF2 364 aa13.47□□□□□ -0.25
CX3CL1-201ENST00000006053 POGKQ9P215 609 aa13.47□□□□□ -0.25
CX3CL1-201ENST00000006053 PLCH2O75038 1416 aa13.47□□□□□ -0.25
CX3CL1-201ENST00000006053 KIF3BO15066 747 aa13.46□□□□□ -0.25
CX3CL1-201ENST00000006053 MORC1Q86VD1 984 aa13.46□□□□□ -0.25
CX3CL1-201ENST00000006053 ADGRF5Q8IZF2 1346 aa13.46□□□□□ -0.25
CX3CL1-201ENST00000006053 CHGAP10645 457 aaKnown RBP13.46□□□□□ -0.26
CX3CL1-201ENST00000006053 ARXQ96QS3 562 aa13.45□□□□□ -0.26
CX3CL1-201ENST00000006053 UPF2Q9HAU5 1272 aaKnown RBP13.45□□□□□ -0.26
CX3CL1-201ENST00000006053 ERCC6L2Q5T890 1561 aa13.45□□□□□ -0.26
CX3CL1-201ENST00000006053 NGEFQ8N5V2 710 aa13.44□□□□□ -0.26
CX3CL1-201ENST00000006053 PCDHB15Q9Y5E8 787 aa13.44□□□□□ -0.26
CX3CL1-201ENST00000006053 RARSP54136 660 aaKnown RBP13.44□□□□□ -0.26
CX3CL1-201ENST00000006053 TCP11L2Q8N4U5 519 aa13.44□□□□□ -0.26
CX3CL1-201ENST00000006053 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
CX3CL1-201ENST00000006053 RLBP1P12271 317 aa13.44□□□□□ -0.26
CX3CL1-201ENST00000006053 TRPM2O94759 1503 aa13.44□□□□□ -0.26
CX3CL1-201ENST00000006053 MYOM1P52179 1685 aa13.44□□□□□ -0.26
CX3CL1-201ENST00000006053 CLTCL1P53675 1640 aa13.43□□□□□ -0.26
CX3CL1-201ENST00000006053 KANK1Q14678 1352 aa13.43□□□□□ -0.26
CX3CL1-201ENST00000006053 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
CX3CL1-201ENST00000006053 ERVK-7P63135 1459 aa13.43□□□□□ -0.26
CX3CL1-201ENST00000006053 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
CX3CL1-201ENST00000006053 KDM5AP29375 1690 aaKnown RBP13.43□□□□□ -0.26
CX3CL1-201ENST00000006053 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
CX3CL1-201ENST00000006053 TRAK1Q9UPV9 953 aa13.42□□□□□ -0.26
CX3CL1-201ENST00000006053 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms