RNA–Protein interactions for RNA: ENSMUST00000197480.4

Smarcc1-203, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

TSL 1 (best) BASIC

Gene Smarcc1, Length 1,949 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-203ENSMUST00000197480 Dnajc5gQ8C632 165 aa34.72■■■■□ 3.15
Smarcc1-203ENSMUST00000197480 Uggt1Q6P5E4 1551 aa34.72■■■■□ 3.15
Smarcc1-203ENSMUST00000197480 Rsph4aQ8BYM7 716 aa34.71■■■■□ 3.15
Smarcc1-203ENSMUST00000197480 Hfm1D3Z4R1 1434 aa34.7■■■■□ 3.15
Smarcc1-203ENSMUST00000197480 Nop58Q6DFW4 536 aaKnown RBP34.7■■■■□ 3.15
Smarcc1-203ENSMUST00000197480 Rock2P70336 1388 aa34.69■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 Dnajc5P60904 198 aa34.68■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 Skint5A7XUY5 1461 aa34.68■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 Setd1aE9PYH6 1716 aa34.67■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 Kdm2aP59997 1161 aa34.66■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 Arhgap23Q69ZH9 1483 aa34.66■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 Plekhg5Q66T02 1073 aa34.65■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 Mroh1E0CZ22 1640 aa34.65■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 RictorQ6QI06 1708 aa34.65■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 Ahdc1Q6PAL7 1594 aaKnown RBP34.64■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 Myo3aQ8K3H5 1613 aa34.64■■■■□ 3.14
Smarcc1-203ENSMUST00000197480 Adamtsl3G3UXC7 1706 aa34.61■■■■□ 3.13
Smarcc1-203ENSMUST00000197480 Plxnc1Q9QZC2 1574 aa34.6■■■■□ 3.13
Smarcc1-203ENSMUST00000197480 Cdk5rap2Q8K389 1822 aa34.58■■■■□ 3.13
Smarcc1-203ENSMUST00000197480 Smg6P61406 1418 aaKnown RBP34.58■■■■□ 3.13
Smarcc1-203ENSMUST00000197480 Os9Q8K2C7 672 aa34.54■■■■□ 3.12
Smarcc1-203ENSMUST00000197480 Gm20521D3Z5F7 333 aa34.53■■■■□ 3.12
Smarcc1-203ENSMUST00000197480 Zbtb4Q5F293 982 aa34.53■■■■□ 3.12
Smarcc1-203ENSMUST00000197480 AU022751B1B0V2 589 aa34.52■■■■□ 3.12
Smarcc1-203ENSMUST00000197480 Srpk2O54781 681 aaKnown RBP34.52■■■■□ 3.12
Smarcc1-203ENSMUST00000197480 Myom1Q62234 1667 aaKnown RBP34.52■■■■□ 3.12
Smarcc1-203ENSMUST00000197480 Kif13aQ9EQW7 1749 aa34.49■■■■□ 3.11
Smarcc1-203ENSMUST00000197480 Pola1P33609 1465 aa34.48■■■■□ 3.11
Smarcc1-203ENSMUST00000197480 Fan1Q69ZT1 1020 aa34.47■■■■□ 3.11
Smarcc1-203ENSMUST00000197480 Plppr3Q7TPB0 716 aa34.47■■■■□ 3.11
Smarcc1-203ENSMUST00000197480 Srcin1Q9QWI6 1250 aa34.47■■■■□ 3.11
Smarcc1-203ENSMUST00000197480 Sipa1l1Q8C0T5 1782 aa34.45■■■■□ 3.11
Smarcc1-203ENSMUST00000197480 PtprmP28828 1452 aa34.45■■■■□ 3.11
Smarcc1-203ENSMUST00000197480 Prrc2bQ7TPM1 1486 aaKnown RBP34.45■■■■□ 3.11
Smarcc1-203ENSMUST00000197480 Pcdh10E9PXQ7 1057 aa34.45■■■■□ 3.11
Smarcc1-203ENSMUST00000197480 Itsn1Q9Z0R4 1714 aa34.45■■■■□ 3.1
Smarcc1-203ENSMUST00000197480 DnmbpQ6TXD4 1580 aa34.4■■■■□ 3.1
Smarcc1-203ENSMUST00000197480 Tubgcp6G5E8P0 1769 aa34.4■■■■□ 3.1
Smarcc1-203ENSMUST00000197480 Nphp4P59240 1425 aa34.4■■■■□ 3.1
Smarcc1-203ENSMUST00000197480 Slc24a1Q91WD8 1130 aa34.39■■■■□ 3.1
Smarcc1-203ENSMUST00000197480 Itsn2Q9Z0R6 1659 aa34.38■■■■□ 3.09
Smarcc1-203ENSMUST00000197480 Ercc6l2Q9JIM3 1537 aa34.38■■■■□ 3.09
Smarcc1-203ENSMUST00000197480 Puf60Q3UEB3 564 aaKnown RBP34.38■■■■□ 3.09
Smarcc1-203ENSMUST00000197480 Usp40Q8BWR4 1235 aa34.37■■■■□ 3.09
Smarcc1-203ENSMUST00000197480 Med14A2ABV5 1459 aaKnown RBP34.36■■■■□ 3.09
Smarcc1-203ENSMUST00000197480 Stard8Q8K031 1019 aa34.36■■■■□ 3.09
Smarcc1-203ENSMUST00000197480 Naip7Q9JIB3 1402 aa34.35■■■■□ 3.09
Smarcc1-203ENSMUST00000197480 Gm13695A2AK44 830 aa34.33■■■■□ 3.09
Smarcc1-203ENSMUST00000197480 Gtf2e1Q9D0D5 440 aa34.33■■■■□ 3.09
Smarcc1-203ENSMUST00000197480 Slc52a2Q9D8F3 450 aa34.32■■■■□ 3.08
Smarcc1-203ENSMUST00000197480 Lrrc7Q80TE7 1490 aa34.31■■■■□ 3.08
Smarcc1-203ENSMUST00000197480 Ift172Q6VH22 1749 aa34.26■■■■□ 3.07
Smarcc1-203ENSMUST00000197480 Safb2Q80YR5 991 aaKnown RBP34.25■■■■□ 3.07
Smarcc1-203ENSMUST00000197480 PalldQ9ET54 1408 aa34.25■■■■□ 3.07
Smarcc1-203ENSMUST00000197480 Sbno1Q689Z5 1390 aa34.24■■■■□ 3.07
Smarcc1-203ENSMUST00000197480 Arhgef28P97433 1693 aa34.22■■■■□ 3.07
Smarcc1-203ENSMUST00000197480 Zc3h13E9Q784 1729 aaKnown RBP34.21■■■■□ 3.07
Smarcc1-203ENSMUST00000197480 PrxO55103 1391 aa34.21■■■■□ 3.07
Smarcc1-203ENSMUST00000197480 Kdm5aQ3UXZ9 1690 aa34.2■■■■□ 3.07
Smarcc1-203ENSMUST00000197480 Chd2E9PZM4 1827 aaKnown RBP34.17■■■■□ 3.06
Smarcc1-203ENSMUST00000197480 Atp1b4Q99ME6 356 aa34.16■■■■□ 3.06
Smarcc1-203ENSMUST00000197480 Shq1Q7TMX5 569 aa34.16■■■■□ 3.06
Smarcc1-203ENSMUST00000197480 Pank3Q8R2W9 370 aa34.15■■■■□ 3.06
Smarcc1-203ENSMUST00000197480 Exoc6Q8R313 802 aa34.14■■■■□ 3.06
Smarcc1-203ENSMUST00000197480 PplQ9R269 1755 aa34.13■■■■□ 3.05
Smarcc1-203ENSMUST00000197480 Eif2ak4Q9QZ05 1648 aa34.13■■■■□ 3.05
Smarcc1-203ENSMUST00000197480 Wwc2Q6NXJ0 1187 aa34.12■■■■□ 3.05
Smarcc1-203ENSMUST00000197480 Stag3O70576 1240 aa34.12■■■■□ 3.05
Smarcc1-203ENSMUST00000197480 Dip2bQ3UH60 1574 aa34.12■■■■□ 3.05
Smarcc1-203ENSMUST00000197480 MaddQ80U28 1577 aa34.11■■■■□ 3.05
Smarcc1-203ENSMUST00000197480 IqubQ8CDK3 788 aa34.1■■■■□ 3.05
Smarcc1-203ENSMUST00000197480 Tmf1B9EKI3 1091 aa34.09■■■■□ 3.05
Smarcc1-203ENSMUST00000197480 P3h3Q8CG70 732 aa34.09■■■■□ 3.05
Smarcc1-203ENSMUST00000197480 Slc4a1apE9PX68 744 aa34.08■■■■□ 3.05
Smarcc1-203ENSMUST00000197480 Mrs2Q5NCE8 434 aa34.07■■■■□ 3.04
Smarcc1-203ENSMUST00000197480 Inpp5dQ9ES52 1191 aa34.06■■■■□ 3.04
Smarcc1-203ENSMUST00000197480 Q9D9H8 365 aa34.06■■■■□ 3.04
Smarcc1-203ENSMUST00000197480 Gemin5Q8BX17 1502 aaKnown RBP34.06■■■■□ 3.04
Smarcc1-203ENSMUST00000197480 Gm16486A0A1D5RMD1 1434 aa34.04■■■■□ 3.04
Smarcc1-203ENSMUST00000197480 Stra8P70278 393 aa34.04■■■■□ 3.04
Smarcc1-203ENSMUST00000197480 Stk26Q99JT2 416 aa34.03■■■■□ 3.04
Smarcc1-203ENSMUST00000197480 Arid4bA2CG63 1314 aaKnown RBP34.02■■■■□ 3.04
Smarcc1-203ENSMUST00000197480 Fam184bQ0KK56 942 aa34.01■■■■□ 3.04
Smarcc1-203ENSMUST00000197480 Zscan10Q3URR7 782 aa34.01■■■■□ 3.04
Smarcc1-203ENSMUST00000197480 Dip2aQ8BWT5 1523 aa34.01■■■■□ 3.03
Smarcc1-203ENSMUST00000197480 Cep170bQ80U49 1574 aa34■■■■□ 3.03
Smarcc1-203ENSMUST00000197480 PnisrA2AJT4 805 aaKnown RBP33.98■■■■□ 3.03
Smarcc1-203ENSMUST00000197480 Txndc2Q6P902 515 aa33.98■■■■□ 3.03
Smarcc1-203ENSMUST00000197480 InsrP15208 1372 aa33.95■■■■□ 3.02
Smarcc1-203ENSMUST00000197480 CenpjQ569L8 1344 aa33.94■■■■□ 3.02
Smarcc1-203ENSMUST00000197480 Slc4a2P13808 1237 aaKnown RBP33.94■■■■□ 3.02
Smarcc1-203ENSMUST00000197480 Psme1P97371 249 aa33.94■■■■□ 3.02
Smarcc1-203ENSMUST00000197480 4930407I10RikD3Z5T8 1512 aa33.94■■■■□ 3.02
Smarcc1-203ENSMUST00000197480 Asxl2Q8BZ32 1370 aa33.91■■■■□ 3.02
Smarcc1-203ENSMUST00000197480 Plekhg1F6S200 1446 aa33.9■■■■□ 3.02
Smarcc1-203ENSMUST00000197480 Utp14aQ640M1 767 aaKnown RBP33.89■■■■□ 3.02
Smarcc1-203ENSMUST00000197480 Anks4bQ8K3X6 423 aa33.89■■■■□ 3.02
Smarcc1-203ENSMUST00000197480 Alpk3Q924C5 1678 aa33.89■■■■□ 3.01
Smarcc1-203ENSMUST00000197480 Abca14E9Q8F8 1683 aa33.86■■■■□ 3.01
Smarcc1-203ENSMUST00000197480 NrdcQ8BHG1 1161 aa33.86■■■■□ 3.01
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms