RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Dnttip2Q8R2M2 758 aaKnown RBP17.39■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Ythdc2B2RR83 1445 aaKnown RBP17.39■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Ipo8Q7TMY7 1010 aa17.37■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Ggt6Q6PDE7 497 aa17.37■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Rpgrip1lQ8CG73 1264 aa17.37■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Esx1O88933 382 aa17.36■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Pde3bQ61409 1100 aa17.36■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Vsig10D3YX43 558 aa17.36■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Asxl1P59598 1514 aa17.35■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 3425401B19RikD3Z1D3 1412 aa17.35■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Lmod3E9QA62 571 aa17.35■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 AI481877A2ALV5 1481 aa17.35■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Magi3Q9EQJ9 1476 aa17.35■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Rrp12Q6P5B0 1295 aaKnown RBP17.34■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Hsp90b1P08113 802 aaKnown RBP17.34■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Gm21190A0A0G2JGJ6 266 aa17.33■□□□□ 0.37
Pcdha1-202ENSMUST00000193839 Erich3F6QRE9 1637 aa17.33■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Ylpm1Q9R0I7 1386 aaKnown RBP17.33■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Rprd2Q6NXI6 1469 aaKnown RBP17.33■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Rab3gap2Q8BMG7 1366 aa17.33■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 PnisrA2AJT4 805 aaKnown RBP17.32■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 AampJ3QN89 436 aa17.32■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Polr3aB2RXC6 1390 aa17.32■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Fyb1O35601 819 aa17.32■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Rtn4Q99P72 1162 aaKnown RBP17.32■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Pbrm1Q8BSQ9 1634 aaKnown RBP17.32■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Peg3Q3URU2 1571 aa17.31■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Ecm2Q5FW85 670 aa17.31■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 MccE9PWI3 1003 aa17.3■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Znf330Q922H9 316 aa17.3■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Mapkbp1Q6NS57 1503 aa17.3■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Tnnt1O88346 262 aa17.3■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Gm156Q58A37 223 aa17.29■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Pik3c2gO70167 1506 aa17.29■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Mre11Q61216 706 aa17.29■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Ppp2r1aQ76MZ3 589 aa17.29■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Ddrgk1Q80WW9 315 aa17.28■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Ccdc60Q8C4J0 545 aa17.28■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Abcc1O35379 1528 aa17.28■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Casc1Q6TDU8 730 aa17.28■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Tnnt2P50752 301 aa17.28■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Znf326O88291 580 aa17.27■□□□□ 0.36
Pcdha1-202ENSMUST00000193839 Naip5Q9R016 1403 aa17.27■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Cluap1Q8R3P7 413 aa17.26■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 G3bp1P97855 465 aaKnown RBP17.26■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Znf710Q3U288 666 aa17.26■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Prex2Q3LAC4 1598 aa17.25■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Washc2Q6PGL7 1334 aa17.25■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Pibf1E9Q6K3 756 aa17.25■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Pak3Q61036 559 aa17.25■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Ccdc30Q8BVF4 654 aa17.25■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Gsdma3Q5Y4Y6 464 aa17.24■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Rusc2Q80U22 1514 aa17.24■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Nol10Q5RJG1 687 aaKnown RBP17.24■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 GphnQ8BUV3 769 aaKnown RBP17.23■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Gapvd1Q6PAR5 1458 aa17.23■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Wdr7Q920I9 1489 aa17.23■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Gnai1B2RSH2 354 aa17.23■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Swt1Q9DBQ9 907 aa17.23■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Gnai3Q9DC51 354 aa17.23■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Atf3Q60765 181 aa17.23■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Cfap74Q3UY96 1578 aa17.22■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Trim58Q5NCC9 485 aa17.22■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Cgnl1Q6AW69 1298 aa17.22■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Cdk19Q8BWD8 501 aa17.22■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Lmtk2Q3TYD6 1471 aa17.22■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Trappc8E9PWG2 1437 aa17.22■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Slc4a2P13808 1237 aaKnown RBP17.21■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Pes1Q9EQ61 584 aaKnown RBP17.21■□□□□ 0.35
Pcdha1-202ENSMUST00000193839 Q7TT23 1179 aa17.2■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Arhgef12Q8R4H2 1543 aaKnown RBP17.2■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Spryd3E9Q9B3 442 aa17.19■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 TatQ8QZR1 454 aa17.19■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 PrxO55103 1391 aa17.19■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Chmp7Q8R1T1 451 aa17.18■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Plekhh1Q80TI1 1356 aa17.18■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Senp3Q9EP97 568 aaKnown RBP17.17■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Kif16bB1AVY7 1312 aa17.17■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Sall3Q62255 1320 aa17.17■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Kdm5bQ80Y84 1544 aa17.17■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 MsnP26041 577 aaKnown RBP17.17■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Abca5Q8K448 1642 aa17.17■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Atp7aQ64430 1491 aa17.16■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Cavin4A2AMM0 362 aa17.16■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Erich6bQ9D4S6 220 aa17.16■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 IbtkQ6ZPR6 1352 aaKnown RBP17.15■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Ncoa1P70365 1447 aa17.15■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Camsap2Q8C1B1 1461 aa17.15■□□□□ 0.34
Pcdha1-202ENSMUST00000193839 Adgrl2Q8JZZ7 1487 aa17.14■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Gimap6Q8K349 305 aa17.13■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 HnrnpmQ9D0E1 729 aaKnown RBP17.13■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 ChgaP26339 463 aaKnown RBP17.13■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Usp16Q99LG0 825 aa17.13■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Rbm25B2RY56 838 aaKnown RBP17.12■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Sh3bp5Q9Z131 463 aa17.12■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Adamts12Q811B3 1600 aa17.12■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Ccdc171E9Q1U1 1324 aa17.11■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Prkrip1Q9CWV6 186 aaKnown RBP17.11■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Adcy10Q8C0T9 1614 aa17.11■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Gm973E9Q295 1059 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms