RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Q7TT23 1179 aa13.21□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Ak9G3UYQ4 1894 aa13.21□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Col17a1Q07563 1470 aa13.21□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Adamts13Q769J6 1426 aa13.21□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Yeats2Q3TUF7 1407 aa13.2□□□□□ -0.3
Rnf41-202ENSMUST00000171342 AatkQ80YE4 1365 aa13.2□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Aplp2Q06335 707 aa13.2□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Tulp4Q9JIL5 1547 aa13.19□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Fam184bQ0KK56 942 aa13.19□□□□□ -0.3
Rnf41-202ENSMUST00000171342 IqubQ8CDK3 788 aa13.19□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Nlrp6Q91WS2 869 aa13.18□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Zscan21Q07231 555 aa13.18□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Iqgap1Q9JKF1 1657 aaKnown RBP13.18□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Abca6Q8K441 1624 aa13.17□□□□□ -0.3
Rnf41-202ENSMUST00000171342 CenpbP27790 599 aa13.17□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Dcaf11Q91VU6 549 aa13.17□□□□□ -0.3
Rnf41-202ENSMUST00000171342 AnkarA2RT91 1465 aa13.16□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Shq1Q7TMX5 569 aa13.15□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Atp10aO54827 1508 aa13.15□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Stard8Q8K031 1019 aa13.15□□□□□ -0.3
Rnf41-202ENSMUST00000171342 Abca17E9PX95 1733 aa13.14□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Safb2Q80YR5 991 aaKnown RBP13.14□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Dip2cE9PWR4 1557 aa13.12□□□□□ -0.31
Rnf41-202ENSMUST00000171342 AU022751B1B0V2 589 aa13.12□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Exosc9Q9JHI7 438 aaKnown RBP13.12□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Myo5cE9Q1F5 1742 aa13.11□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Q9D9H8 365 aa13.11□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Kif7B7ZNG0 1348 aa13.11□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Kdm5cP41230 1554 aa13.11□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Esx1O88933 382 aa13.1□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Mak16Q8BGS0 296 aaKnown RBP13.1□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Cfap65Q3V0B4 1847 aa13.1□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Plch2A2AP18 1501 aa13.09□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Utp14aQ640M1 767 aaKnown RBP13.09□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Ppp2r1aQ76MZ3 589 aa13.09□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Uggt2E9Q4X2 1504 aa13.09□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Clasp1Q80TV8 1535 aaKnown RBP13.09□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Prex1Q69ZK0 1650 aa13.09□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Mink1Q9JM52 1308 aa13.09□□□□□ -0.31
Rnf41-202ENSMUST00000171342 Myo3aQ8K3H5 1613 aa13.07□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Synj2Q9D2G5 1434 aa13.07□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Txndc2Q6P902 515 aa13.07□□□□□ -0.32
Rnf41-202ENSMUST00000171342 AglF8VPN4 1532 aa13.07□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Fndc1E9Q043 1732 aa13.07□□□□□ -0.32
Rnf41-202ENSMUST00000171342 RereQ80TZ9 1558 aa13.06□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Zranb1Q7M760 708 aa13.06□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Iqgap3F8VQ29 1632 aa13.06□□□□□ -0.32
Rnf41-202ENSMUST00000171342 CrbnQ8C7D2 445 aa13.06□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Rsph4aQ8BYM7 716 aa13.05□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Topbp1Q6ZQF0 1515 aa13.05□□□□□ -0.32
Rnf41-202ENSMUST00000171342 CenpjQ569L8 1344 aa13.05□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Talpid3E9PV87 1520 aa13.05□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Slc52a2Q9D8F3 450 aa13.05□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Psme1P97371 249 aa13.04□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Cdc42bpgQ80UW5 1551 aa13.04□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Ppp4r2Q0VGB7 417 aa13.03□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Neurod2Q62414 383 aa13.03□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Dnajc5gQ8C632 165 aa13.03□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Skint5A7XUY5 1461 aa13.03□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Zfp444Q3TDV8 331 aaKnown RBP13.03□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Prrc2bQ7TPM1 1486 aaKnown RBP13.03□□□□□ -0.32
Rnf41-202ENSMUST00000171342 Nphp4P59240 1425 aa13.02□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Sbno1Q689Z5 1390 aa13.01□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Rab3gap2Q8BMG7 1366 aa13.01□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Hfm1D3Z4R1 1434 aa13.01□□□□□ -0.33
Rnf41-202ENSMUST00000171342 L3mbtl2P59178 703 aa13.01□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Adgrb3Q80ZF8 1522 aa13.01□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Znf316Q6PGE4 1016 aa13.01□□□□□ -0.33
Rnf41-202ENSMUST00000171342 NpatQ8BMA5 1420 aa13.01□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Rims1Q99NE5 1463 aa13.01□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Gm16486A0A1D5RMD1 1434 aa13□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Atp2b2Q9R0K7 1198 aa13□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Tmem131lQ3U3D7 1597 aa13□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Efcab6Q6P1E8 1516 aa13□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Asxl2Q8BZ32 1370 aa12.99□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Arid4bA2CG63 1314 aaKnown RBP12.99□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Ecm2Q5FW85 670 aa12.99□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Anp32aO35381 247 aa12.98□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Speer4f1Q9D5Q6 258 aa12.98□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Lrrc7Q80TE7 1490 aa12.98□□□□□ -0.33
Rnf41-202ENSMUST00000171342 MyclP10166 368 aa12.98□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Wdr43Q6ZQL4 677 aaKnown RBP12.98□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Setd1aE9PYH6 1716 aa12.97□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Knl1Q66JQ7 1612 aa12.97□□□□□ -0.33
Rnf41-202ENSMUST00000171342 NeflP08551 543 aa12.97□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Abca8aQ8K442 1620 aa12.96□□□□□ -0.33
Rnf41-202ENSMUST00000171342 PalldQ9ET54 1408 aa12.96□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Golga2Q921M4 999 aa12.96□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Ttc37F8VPK0 1563 aa12.96□□□□□ -0.33
Rnf41-202ENSMUST00000171342 Apbb1Q9QXJ1 710 aa12.96□□□□□ -0.34
Rnf41-202ENSMUST00000171342 AdgbG3UZ78 1657 aa12.95□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Myom2Q14BI5 1463 aa12.95□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Slc4a3P16283 1227 aa12.95□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Tcerg1Q8CGF7 1100 aaKnown RBP12.95□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Gsto1O09131 240 aa12.95□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Cdk19Q8BWD8 501 aa12.95□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Cep152A2AUM9 1736 aaKnown RBP12.95□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Tecpr2Q3UH45 1423 aa12.94□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Upf2A2AT37 1269 aaKnown RBP12.93□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Pola1P33609 1465 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms