RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Tpm4Q6IRU2 248 aa15.61■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Gm21190A0A0G2JGJ6 266 aa15.61■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Cplx1P63040 134 aa15.61■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Polr3gQ6NXY9 223 aa15.61■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Kif4P33174 1231 aa15.6■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Q9D2X8 372 aa15.6■□□□□ 0.09
Gm28043-201ENSMUST00000130871 A0A1L1SQF0 893 aa15.6■□□□□ 0.09
Gm28043-201ENSMUST00000130871 WrnO09053 1401 aa15.6■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Ddx11Q6AXC6 880 aa15.6■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Ric3Q8BPM6 367 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Usp16Q99LG0 825 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Tomm22Q9CPQ3 142 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Gnai1B2RSH2 354 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Gnai3Q9DC51 354 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Gprasp1Q5U4C1 1347 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Smc3Q9CW03 1217 aaKnown RBP15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Rpgrip1lQ8CG73 1264 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Rec8Q8C5S7 591 aa15.58■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Drc7Q6V3W6 876 aa15.58■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Tdrd9Q14BI7 1383 aa15.57■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Cetn4Q8K4K1 168 aa15.57■□□□□ 0.08
Gm28043-201ENSMUST00000130871 KarsQ99MN1 595 aaKnown RBP15.57■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Q8C5K5 320 aa15.56■□□□□ 0.08
Gm28043-201ENSMUST00000130871 PhaxQ9JJT9 385 aaKnown RBP15.56■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Fbxo2Q80UW2 297 aa15.56■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Prkrip1Q9CWV6 186 aaKnown RBP15.56■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Taf3Q5HZG4 932 aa15.56■□□□□ 0.08
Gm28043-201ENSMUST00000130871 ErbinQ80TH2 1402 aa15.55■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Dhx16G3X8X0 1044 aaKnown RBP15.55■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Sycp2Q9CUU3 1500 aa15.55■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Swt1Q9DBQ9 907 aa15.55■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Erc2Q6PH08 957 aa15.55■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Neurod6P48986 337 aa15.54■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Cecr2E9Q2Z1 1453 aa15.54■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Arid4aF8VPQ2 1261 aaKnown RBP15.54■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Pank1Q8K4K6 548 aa15.54■□□□□ 0.08
Gm28043-201ENSMUST00000130871 CrcpO35427 148 aa15.54■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Gsto1O09131 240 aa15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Ccdc34Q3UI66 367 aa15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Cc2d2bA0A286YDU8 1405 aa15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Crybg2B7ZCC2 1516 aa15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Cfdp1O88271 295 aaKnown RBP15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Rbm25B2RY56 838 aaKnown RBP15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Hook1Q8BIL5 728 aa15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Ccdc183A2AJB1 534 aa15.52■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Noc3lQ8VI84 807 aaKnown RBP15.52■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Odf2A3KGV1 830 aaKnown RBP15.52■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Hmgn5Q9JL35 406 aa15.52■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Fyb1O35601 819 aa15.52■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Nectin2P32507 530 aa15.52■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Gsdma3Q5Y4Y6 464 aa15.52■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Dhx29Q6PGC1 1365 aaKnown RBP15.52■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Nsd2Q8BVE8 1365 aa15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 PnisrA2AJT4 805 aaKnown RBP15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Jph4Q80WT0 628 aa15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ccp110Q7TSH4 1004 aa15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Chmp4cQ9D7F7 232 aa15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Cchcr1Q8K2I2 770 aa15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Hmox1P14901 289 aa15.5■□□□□ 0.07
Gm28043-201ENSMUST00000130871 PogkQ80TC5 607 aa15.5■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Gpatch3Q8BIY1 525 aa15.5■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Nek4Q9Z1J2 792 aa15.5■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ankrd36D3Z4K0 1415 aa15.5■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ccdc173A0JLY1 547 aa15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Kif3aP28741 701 aa15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Mad1l1Q9WTX8 717 aaKnown RBP15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Samd1D3YXK1 519 aa15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ttll13A4Q9F6 804 aa15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Sv2bQ8BG39 683 aa15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Dixdc1Q80Y83 711 aa15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 NaspQ99MD9 773 aaKnown RBP15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 NexnQ7TPW1 607 aa15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Nutm1Q8BHP2 1126 aa15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Puf60Q3UEB3 564 aaKnown RBP15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ccdc43Q9CR29 222 aaKnown RBP15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ppm1fQ8CGA0 452 aa15.47■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Hnrnpul1Q8VDM6 859 aaKnown RBP15.47■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Plekhh1Q80TI1 1356 aa15.47■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Cyp46a1Q9WVK8 500 aa15.47■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Mcm2P97310 904 aa15.47■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Fam193aQ8CGI1 1231 aaKnown RBP15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Atad2bE9Q166 1460 aaKnown RBP15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Cfap99A0A140LIX9 648 aa15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 SkilQ60665 675 aa15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Wdr78E9PYY5 807 aa15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Znhit6Q3UFB2 460 aaKnown RBP15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Nol12Q8BG17 217 aa15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 EzrP26040 586 aaKnown RBP15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ubxn4Q8VCH8 506 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Soga1E1U8D0 1418 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 FanciQ8K368 1330 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 FosbP13346 338 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ttll5Q8CHB8 1328 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Synj1Q8CHC4 1574 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Trim29Q8R2Q0 587 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Atp2b2Q9R0K7 1198 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Pde4cQ3UEI1 686 aa15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Usp48Q3V0C5 1052 aa15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Zrsr2Q62377 462 aaKnown RBP15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Znf710Q3U288 666 aa15.44■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms