RNA–Protein interactions for RNA: ENSMUST00000111564.7

Clip1-204, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clip1, Length 5,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-204ENSMUST00000111564 Zscan21Q07231 555 aa13.46□□□□□ -0.25
Clip1-204ENSMUST00000111564 Mphosph9A6H5Y1 991 aa13.46□□□□□ -0.25
Clip1-204ENSMUST00000111564 Calcoco2A2A6M5 331 aa13.46□□□□□ -0.25
Clip1-204ENSMUST00000111564 Kri1Q8VDQ9 704 aaKnown RBP13.46□□□□□ -0.25
Clip1-204ENSMUST00000111564 Igf1rQ60751 1373 aa13.46□□□□□ -0.26
Clip1-204ENSMUST00000111564 CrebrfQ8CDG5 640 aaKnown RBP13.45□□□□□ -0.26
Clip1-204ENSMUST00000111564 Cluap1Q8R3P7 413 aa13.45□□□□□ -0.26
Clip1-204ENSMUST00000111564 Rab11fip3Q8CHD8 1047 aa13.45□□□□□ -0.26
Clip1-204ENSMUST00000111564 Atp10dQ8K2X1 1416 aa13.45□□□□□ -0.26
Clip1-204ENSMUST00000111564 Smarce1O54941 411 aaKnown RBP13.45□□□□□ -0.26
Clip1-204ENSMUST00000111564 Chmp7Q8R1T1 451 aa13.45□□□□□ -0.26
Clip1-204ENSMUST00000111564 Dhx16G3X8X0 1044 aaKnown RBP13.44□□□□□ -0.26
Clip1-204ENSMUST00000111564 Arhgef40Q3UPH7 1517 aa13.44□□□□□ -0.26
Clip1-204ENSMUST00000111564 Pip4k2bQ80XI4 416 aa13.44□□□□□ -0.26
Clip1-204ENSMUST00000111564 Ccar1Q8CH18 1146 aaKnown RBP13.44□□□□□ -0.26
Clip1-204ENSMUST00000111564 Slc4a10Q5DTL9 1118 aa13.44□□□□□ -0.26
Clip1-204ENSMUST00000111564 Gcc2Q8CHG3 1679 aa13.44□□□□□ -0.26
Clip1-204ENSMUST00000111564 Mak16Q8BGS0 296 aaKnown RBP13.43□□□□□ -0.26
Clip1-204ENSMUST00000111564 Chmp5Q9D7S9 219 aa13.43□□□□□ -0.26
Clip1-204ENSMUST00000111564 Mlh3A0A1Y7VMP7 1443 aa13.43□□□□□ -0.26
Clip1-204ENSMUST00000111564 Zfp644E9QA22 1323 aa13.43□□□□□ -0.26
Clip1-204ENSMUST00000111564 Fyb1O35601 819 aa13.43□□□□□ -0.26
Clip1-204ENSMUST00000111564 Mroh2aD3Z750 1679 aa13.43□□□□□ -0.26
Clip1-204ENSMUST00000111564 Adcy10Q8C0T9 1614 aa13.42□□□□□ -0.26
Clip1-204ENSMUST00000111564 AppP12023 770 aa13.42□□□□□ -0.26
Clip1-204ENSMUST00000111564 Slc4a1apE9PX68 744 aa13.42□□□□□ -0.26
Clip1-204ENSMUST00000111564 Fbln2P37889 1221 aa13.42□□□□□ -0.26
Clip1-204ENSMUST00000111564 Ksr2Q3UVC0 959 aa13.42□□□□□ -0.26
Clip1-204ENSMUST00000111564 Shq1Q7TMX5 569 aa13.42□□□□□ -0.26
Clip1-204ENSMUST00000111564 Tpd52l1O54818 204 aa13.41□□□□□ -0.26
Clip1-204ENSMUST00000111564 Mapkbp1Q6NS57 1503 aa13.41□□□□□ -0.26
Clip1-204ENSMUST00000111564 Caskin1Q6P9K8 1431 aa13.4□□□□□ -0.26
Clip1-204ENSMUST00000111564 Atf3Q60765 181 aa13.4□□□□□ -0.26
Clip1-204ENSMUST00000111564 Sirt1Q923E4 737 aa13.4□□□□□ -0.26
Clip1-204ENSMUST00000111564 Kiaa1551Q5DTW7 1521 aa13.4□□□□□ -0.26
Clip1-204ENSMUST00000111564 Il16O54824 1322 aa13.4□□□□□ -0.26
Clip1-204ENSMUST00000111564 Gm21969J3QJZ1 289 aa13.4□□□□□ -0.26
Clip1-204ENSMUST00000111564 Erich6bQ9D4S6 220 aa13.4□□□□□ -0.26
Clip1-204ENSMUST00000111564 Odf2A3KGV1 830 aaKnown RBP13.4□□□□□ -0.26
Clip1-204ENSMUST00000111564 Gm156Q58A37 223 aa13.39□□□□□ -0.27
Clip1-204ENSMUST00000111564 Ccer1Q9CQL2 403 aa13.39□□□□□ -0.27
Clip1-204ENSMUST00000111564 Gm21190A0A0G2JGJ6 266 aa13.39□□□□□ -0.27
Clip1-204ENSMUST00000111564 Ccdc27Q3V036 639 aa13.38□□□□□ -0.27
Clip1-204ENSMUST00000111564 Kdm5bQ80Y84 1544 aa13.38□□□□□ -0.27
Clip1-204ENSMUST00000111564 Tsen2Q6P7W5 460 aa13.38□□□□□ -0.27
Clip1-204ENSMUST00000111564 Exoc6Q8R313 802 aa13.38□□□□□ -0.27
Clip1-204ENSMUST00000111564 Eva1cP58659 440 aa13.37□□□□□ -0.27
Clip1-204ENSMUST00000111564 Prm3Q62100 101 aa13.37□□□□□ -0.27
Clip1-204ENSMUST00000111564 Mical1Q8VDP3 1048 aa13.37□□□□□ -0.27
Clip1-204ENSMUST00000111564 Krt82Q99M74 516 aa13.37□□□□□ -0.27
Clip1-204ENSMUST00000111564 EspnQ9ET47 871 aa13.37□□□□□ -0.27
Clip1-204ENSMUST00000111564 Sf3b2Q3UJB0 878 aaKnown RBP13.36□□□□□ -0.27
Clip1-204ENSMUST00000111564 Tpm3P21107 285 aaKnown RBP13.36□□□□□ -0.27
Clip1-204ENSMUST00000111564 Cdc42bpaQ3UU96 1719 aa13.36□□□□□ -0.27
Clip1-204ENSMUST00000111564 Mfap1aC0HKD8 439 aaKnown RBP13.36□□□□□ -0.27
Clip1-204ENSMUST00000111564 Mfap1bC0HKD9 439 aaKnown RBP13.36□□□□□ -0.27
Clip1-204ENSMUST00000111564 Atp6v1dP57746 247 aa13.36□□□□□ -0.27
Clip1-204ENSMUST00000111564 Rfx7F8VPJ6 1459 aa13.35□□□□□ -0.27
Clip1-204ENSMUST00000111564 Wdr7Q920I9 1489 aa13.35□□□□□ -0.27
Clip1-204ENSMUST00000111564 Ankrd36D3Z4K0 1415 aa13.35□□□□□ -0.27
Clip1-204ENSMUST00000111564 PtprtQ99M80 1454 aa13.35□□□□□ -0.27
Clip1-204ENSMUST00000111564 Cald1E9QA15 768 aaKnown RBP13.35□□□□□ -0.27
Clip1-204ENSMUST00000111564 GorabQ8BRM2 368 aa13.34□□□□□ -0.27
Clip1-204ENSMUST00000111564 Chd1P40201 1711 aa13.34□□□□□ -0.27
Clip1-204ENSMUST00000111564 Cplx2P84086 134 aa13.34□□□□□ -0.27
Clip1-204ENSMUST00000111564 Trappc8E9PWG2 1437 aa13.34□□□□□ -0.27
Clip1-204ENSMUST00000111564 Paf1Q8K2T8 535 aa13.33□□□□□ -0.27
Clip1-204ENSMUST00000111564 Tpm4Q6IRU2 248 aa13.33□□□□□ -0.28
Clip1-204ENSMUST00000111564 Map3k5O35099 1380 aa13.33□□□□□ -0.28
Clip1-204ENSMUST00000111564 Mink1Q9JM52 1308 aa13.33□□□□□ -0.28
Clip1-204ENSMUST00000111564 Cgnl1Q6AW69 1298 aa13.33□□□□□ -0.28
Clip1-204ENSMUST00000111564 Znf608Q56A10 1511 aa13.32□□□□□ -0.28
Clip1-204ENSMUST00000111564 Kdm6bQ5NCY0 1641 aa13.32□□□□□ -0.28
Clip1-204ENSMUST00000111564 Tpm2P58774 284 aa13.32□□□□□ -0.28
Clip1-204ENSMUST00000111564 Zpr1Q62384 459 aa13.32□□□□□ -0.28
Clip1-204ENSMUST00000111564 CrbnQ8C7D2 445 aa13.32□□□□□ -0.28
Clip1-204ENSMUST00000111564 Tcerg1Q8CGF7 1100 aaKnown RBP13.31□□□□□ -0.28
Clip1-204ENSMUST00000111564 Evc2Q8K1G2 1220 aa13.31□□□□□ -0.28
Clip1-204ENSMUST00000111564 Slc4a3P16283 1227 aa13.31□□□□□ -0.28
Clip1-204ENSMUST00000111564 UvssaQ9D479 717 aa13.31□□□□□ -0.28
Clip1-204ENSMUST00000111564 Zcchc11B2RX14 1644 aaKnown RBP13.31□□□□□ -0.28
Clip1-204ENSMUST00000111564 Sin3aQ60520 1274 aaKnown RBP13.31□□□□□ -0.28
Clip1-204ENSMUST00000111564 AU015836B2RUM3 263 aa13.31□□□□□ -0.28
Clip1-204ENSMUST00000111564 Cep170Q6A065 1588 aa13.31□□□□□ -0.28
Clip1-204ENSMUST00000111564 Ccdc146E9Q9F7 977 aa13.3□□□□□ -0.28
Clip1-204ENSMUST00000111564 AI481877A2ALV5 1481 aa13.3□□□□□ -0.28
Clip1-204ENSMUST00000111564 Supt16hQ920B9 1047 aa13.3□□□□□ -0.28
Clip1-204ENSMUST00000111564 Gsdma3Q5Y4Y6 464 aa13.29□□□□□ -0.28
Clip1-204ENSMUST00000111564 Adgrb2Q8CGM1 1561 aa13.29□□□□□ -0.28
Clip1-204ENSMUST00000111564 Ccdc43Q9CR29 222 aaKnown RBP13.29□□□□□ -0.28
Clip1-204ENSMUST00000111564 RdxP26043 583 aaKnown RBP13.29□□□□□ -0.28
Clip1-204ENSMUST00000111564 Ccp110Q7TSH4 1004 aa13.29□□□□□ -0.28
Clip1-204ENSMUST00000111564 Usp40Q8BWR4 1235 aa13.29□□□□□ -0.28
Clip1-204ENSMUST00000111564 Dnai1Q8C0M8 701 aa13.29□□□□□ -0.28
Clip1-204ENSMUST00000111564 Tceal9Q9DD24 104 aa13.28□□□□□ -0.28
Clip1-204ENSMUST00000111564 Ttll5Q8CHB8 1328 aa13.28□□□□□ -0.28
Clip1-204ENSMUST00000111564 Prdm16A2A935 1275 aa13.28□□□□□ -0.28
Clip1-204ENSMUST00000111564 CrcpO35427 148 aa13.28□□□□□ -0.28
Clip1-204ENSMUST00000111564 Ipo8Q7TMY7 1010 aa13.28□□□□□ -0.28
Clip1-204ENSMUST00000111564 Fam71e1A1L3C1 212 aa13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms