RNA–Protein interactions for RNA: ENSMUST00000111190.8

Cd44-204, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-204ENSMUST00000111190 ArsiQ32KI9 573 aa10.64□□□□□ -0.71
Cd44-204ENSMUST00000111190 Kif3bQ61771 747 aa10.64□□□□□ -0.71
Cd44-204ENSMUST00000111190 GphnQ8BUV3 769 aaKnown RBP10.64□□□□□ -0.71
Cd44-204ENSMUST00000111190 Zbtb7cQ8VCZ7 619 aa10.64□□□□□ -0.71
Cd44-204ENSMUST00000111190 Cdk13Q69ZA1 1511 aaKnown RBP10.64□□□□□ -0.71
Cd44-204ENSMUST00000111190 Ylpm1Q9R0I7 1386 aaKnown RBP10.64□□□□□ -0.71
Cd44-204ENSMUST00000111190 Trpm1Q2TV84 1622 aa10.64□□□□□ -0.71
Cd44-204ENSMUST00000111190 Prex1Q69ZK0 1650 aa10.63□□□□□ -0.71
Cd44-204ENSMUST00000111190 Naip6Q9JIB6 1403 aa10.63□□□□□ -0.71
Cd44-204ENSMUST00000111190 Polr3aB2RXC6 1390 aa10.63□□□□□ -0.71
Cd44-204ENSMUST00000111190 Gli2Q0VGT2 1544 aa10.62□□□□□ -0.71
Cd44-204ENSMUST00000111190 Iqgap3F8VQ29 1632 aa10.62□□□□□ -0.71
Cd44-204ENSMUST00000111190 Setd1aE9PYH6 1716 aa10.62□□□□□ -0.71
Cd44-204ENSMUST00000111190 Bcl9Q9D219 1425 aa10.61□□□□□ -0.71
Cd44-204ENSMUST00000111190 Akap12Q9WTQ5 1684 aa10.6□□□□□ -0.71
Cd44-204ENSMUST00000111190 AnkarA2RT91 1465 aa10.6□□□□□ -0.71
Cd44-204ENSMUST00000111190 Hnrnpul2Q00PI9 745 aaKnown RBP10.6□□□□□ -0.71
Cd44-204ENSMUST00000111190 Edc4Q3UJB9 1406 aaKnown RBP10.6□□□□□ -0.71
Cd44-204ENSMUST00000111190 Sin3aQ60520 1274 aaKnown RBP10.59□□□□□ -0.71
Cd44-204ENSMUST00000111190 Cwc22Q8C5N3 908 aaKnown RBP10.59□□□□□ -0.71
Cd44-204ENSMUST00000111190 Washc2Q6PGL7 1334 aa10.59□□□□□ -0.71
Cd44-204ENSMUST00000111190 Dip2bQ3UH60 1574 aa10.59□□□□□ -0.71
Cd44-204ENSMUST00000111190 Scn4aQ9ER60 1841 aa10.59□□□□□ -0.71
Cd44-204ENSMUST00000111190 Ehbp1l1Q99MS7 1716 aa10.59□□□□□ -0.71
Cd44-204ENSMUST00000111190 Abca8aQ8K442 1620 aa10.59□□□□□ -0.71
Cd44-204ENSMUST00000111190 Cep152A2AUM9 1736 aaKnown RBP10.58□□□□□ -0.72
Cd44-204ENSMUST00000111190 Topaz1E5FYH1 1653 aa10.58□□□□□ -0.72
Cd44-204ENSMUST00000111190 Abcc6Q9R1S7 1498 aa10.57□□□□□ -0.72
Cd44-204ENSMUST00000111190 Tulp4Q9JIL5 1547 aa10.57□□□□□ -0.72
Cd44-204ENSMUST00000111190 Rock2P70336 1388 aa10.57□□□□□ -0.72
Cd44-204ENSMUST00000111190 Adamts13Q769J6 1426 aa10.57□□□□□ -0.72
Cd44-204ENSMUST00000111190 C1qtnf12Q8R2Z0 308 aa10.57□□□□□ -0.72
Cd44-204ENSMUST00000111190 Smg6P61406 1418 aaKnown RBP10.56□□□□□ -0.72
Cd44-204ENSMUST00000111190 Rundc1Q0VDN7 615 aa10.56□□□□□ -0.72
Cd44-204ENSMUST00000111190 Card11Q8CIS0 1159 aa10.56□□□□□ -0.72
Cd44-204ENSMUST00000111190 CltcQ68FD5 1675 aaKnown RBP10.55□□□□□ -0.72
Cd44-204ENSMUST00000111190 Efcab6Q6P1E8 1516 aa10.55□□□□□ -0.72
Cd44-204ENSMUST00000111190 Ino80Q6ZPV2 1559 aa10.55□□□□□ -0.72
Cd44-204ENSMUST00000111190 Adamts7Q68SA9 1657 aa10.54□□□□□ -0.72
Cd44-204ENSMUST00000111190 Grwd1Q810D6 446 aaKnown RBP10.54□□□□□ -0.72
Cd44-204ENSMUST00000111190 WdpcpQ8C456 722 aa10.54□□□□□ -0.72
Cd44-204ENSMUST00000111190 Knl1Q66JQ7 1612 aa10.54□□□□□ -0.72
Cd44-204ENSMUST00000111190 Adgrb3Q80ZF8 1522 aa10.53□□□□□ -0.72
Cd44-204ENSMUST00000111190 Rapgef3Q8VCC8 918 aa10.53□□□□□ -0.72
Cd44-204ENSMUST00000111190 Ttc21bQ0HA38 1315 aa10.53□□□□□ -0.72
Cd44-204ENSMUST00000111190 ErbinQ80TH2 1402 aa10.53□□□□□ -0.72
Cd44-204ENSMUST00000111190 Med14A2ABV5 1459 aaKnown RBP10.53□□□□□ -0.72
Cd44-204ENSMUST00000111190 Ltbp4Q8K4G1 1666 aa10.52□□□□□ -0.72
Cd44-204ENSMUST00000111190 Hspa1lP16627 641 aa10.52□□□□□ -0.73
Cd44-204ENSMUST00000111190 Sox12Q04890 314 aa10.52□□□□□ -0.73
Cd44-204ENSMUST00000111190 Rtn4Q99P72 1162 aaKnown RBP10.52□□□□□ -0.73
Cd44-204ENSMUST00000111190 Mroh3A0A1D5RM54 893 aa10.51□□□□□ -0.73
Cd44-204ENSMUST00000111190 Stra8P70278 393 aa10.51□□□□□ -0.73
Cd44-204ENSMUST00000111190 Plekhg5Q66T02 1073 aa10.51□□□□□ -0.73
Cd44-204ENSMUST00000111190 Tecpr2Q3UH45 1423 aa10.51□□□□□ -0.73
Cd44-204ENSMUST00000111190 Tubgcp6G5E8P0 1769 aa10.51□□□□□ -0.73
Cd44-204ENSMUST00000111190 Erich6D3Z6S9 713 aa10.5□□□□□ -0.73
Cd44-204ENSMUST00000111190 GapdhsQ64467 440 aa10.5□□□□□ -0.73
Cd44-204ENSMUST00000111190 Itsn2Q9Z0R6 1659 aa10.5□□□□□ -0.73
Cd44-204ENSMUST00000111190 RictorQ6QI06 1708 aa10.5□□□□□ -0.73
Cd44-204ENSMUST00000111190 Uggt1Q6P5E4 1551 aa10.5□□□□□ -0.73
Cd44-204ENSMUST00000111190 Anks4bQ8K3X6 423 aa10.5□□□□□ -0.73
Cd44-204ENSMUST00000111190 Cdk5rap2Q8K389 1822 aa10.49□□□□□ -0.73
Cd44-204ENSMUST00000111190 Plxnc1Q9QZC2 1574 aa10.49□□□□□ -0.73
Cd44-204ENSMUST00000111190 Ifit1bl1D3Z6F0 470 aa10.49□□□□□ -0.73
Cd44-204ENSMUST00000111190 Tshz2Q68FE9 1030 aa10.49□□□□□ -0.73
Cd44-204ENSMUST00000111190 Sipa1l1Q8C0T5 1782 aa10.48□□□□□ -0.73
Cd44-204ENSMUST00000111190 Rims1Q99NE5 1463 aa10.48□□□□□ -0.73
Cd44-204ENSMUST00000111190 Arid4bA2CG63 1314 aaKnown RBP10.48□□□□□ -0.73
Cd44-204ENSMUST00000111190 Scaf11E9PZM7 1456 aaKnown RBP10.47□□□□□ -0.73
Cd44-204ENSMUST00000111190 Pola1P33609 1465 aa10.47□□□□□ -0.73
Cd44-204ENSMUST00000111190 Arhgap23Q69ZH9 1483 aa10.47□□□□□ -0.73
Cd44-204ENSMUST00000111190 Hfm1D3Z4R1 1434 aa10.47□□□□□ -0.73
Cd44-204ENSMUST00000111190 Iqsec2Q5DU25 1478 aa10.46□□□□□ -0.73
Cd44-204ENSMUST00000111190 Rimbp3Q3V0F0 1606 aa10.46□□□□□ -0.73
Cd44-204ENSMUST00000111190 Gm13695A2AK44 830 aa10.46□□□□□ -0.74
Cd44-204ENSMUST00000111190 Prm3Q62100 101 aa10.46□□□□□ -0.74
Cd44-204ENSMUST00000111190 Cypt1Q8CH20 168 aa10.46□□□□□ -0.74
Cd44-204ENSMUST00000111190 Riok3Q9DBU3 519 aaKnown RBP10.46□□□□□ -0.74
Cd44-204ENSMUST00000111190 Bcl11bQ99PV8 884 aa10.45□□□□□ -0.74
Cd44-204ENSMUST00000111190 Myom1Q62234 1667 aaKnown RBP10.44□□□□□ -0.74
Cd44-204ENSMUST00000111190 Mroh1E0CZ22 1640 aa10.44□□□□□ -0.74
Cd44-204ENSMUST00000111190 Myo3aQ8K3H5 1613 aa10.44□□□□□ -0.74
Cd44-204ENSMUST00000111190 DnmbpQ6TXD4 1580 aa10.43□□□□□ -0.74
Cd44-204ENSMUST00000111190 Sall3Q62255 1320 aa10.43□□□□□ -0.74
Cd44-204ENSMUST00000111190 Ift172Q6VH22 1749 aa10.42□□□□□ -0.74
Cd44-204ENSMUST00000111190 AatkQ80YE4 1365 aa10.42□□□□□ -0.74
Cd44-204ENSMUST00000111190 Gemin5Q8BX17 1502 aaKnown RBP10.42□□□□□ -0.74
Cd44-204ENSMUST00000111190 Stk24Q99KH8 431 aa10.41□□□□□ -0.74
Cd44-204ENSMUST00000111190 Gli3Q61602 1583 aa10.41□□□□□ -0.74
Cd44-204ENSMUST00000111190 Phlpp1Q8CHE4 1687 aa10.41□□□□□ -0.74
Cd44-204ENSMUST00000111190 Rims2Q9EQZ7 1530 aa10.41□□□□□ -0.74
Cd44-204ENSMUST00000111190 PzpQ61838 1495 aa10.4□□□□□ -0.74
Cd44-204ENSMUST00000111190 Txndc2Q6P902 515 aa10.4□□□□□ -0.75
Cd44-204ENSMUST00000111190 Stard8Q8K031 1019 aa10.4□□□□□ -0.75
Cd44-204ENSMUST00000111190 Sbno1Q689Z5 1390 aa10.4□□□□□ -0.75
Cd44-204ENSMUST00000111190 Nphp4P59240 1425 aa10.39□□□□□ -0.75
Cd44-204ENSMUST00000111190 Kif13aQ9EQW7 1749 aa10.39□□□□□ -0.75
Cd44-204ENSMUST00000111190 Kdm5aQ3UXZ9 1690 aa10.38□□□□□ -0.75
Cd44-204ENSMUST00000111190 Skint5A7XUY5 1461 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms