RNA–Protein interactions for RNA: ENSMUST00000109113.7

Clk4-203, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 1 (best) BASIC

Gene Clk4, Length 1,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-203ENSMUST00000109113 Lce1dQ9D731 133 aa8.72□□□□□ -1.01
Clk4-203ENSMUST00000109113 Gm7137J3QMW1 236 aa8.71□□□□□ -1.02
Clk4-203ENSMUST00000109113 Gm156Q58A37 223 aa8.71□□□□□ -1.02
Clk4-203ENSMUST00000109113 Rgs19Q9CX84 216 aa8.71□□□□□ -1.02
Clk4-203ENSMUST00000109113 Cc2d2bA0A286YDU8 1405 aa8.69□□□□□ -1.02
Clk4-203ENSMUST00000109113 PogzQ8BZH4 1409 aaKnown RBP8.69□□□□□ -1.02
Clk4-203ENSMUST00000109113 Nup160Q9Z0W3 1402 aaKnown RBP8.69□□□□□ -1.02
Clk4-203ENSMUST00000109113 Setd1bQ8CFT2 1985 aa8.69□□□□□ -1.02
Clk4-203ENSMUST00000109113 Gm19668J3QMD1 248 aa8.69□□□□□ -1.02
Clk4-203ENSMUST00000109113 Golga3P55937 1487 aa8.68□□□□□ -1.02
Clk4-203ENSMUST00000109113 Disp1Q3TDN0 1521 aa8.68□□□□□ -1.02
Clk4-203ENSMUST00000109113 Tie1Q06806 1134 aa8.68□□□□□ -1.02
Clk4-203ENSMUST00000109113 Prdm10Q3UTQ7 1184 aa8.68□□□□□ -1.02
Clk4-203ENSMUST00000109113 Gpatch8A2A6A1 1505 aa8.67□□□□□ -1.02
Clk4-203ENSMUST00000109113 Psen1P49769 467 aa8.66□□□□□ -1.02
Clk4-203ENSMUST00000109113 P3h3Q8CG70 732 aa8.66□□□□□ -1.02
Clk4-203ENSMUST00000109113 Grxcr1Q50H32 290 aa8.65□□□□□ -1.02
Clk4-203ENSMUST00000109113 Rapgef2Q8CHG7 1496 aa8.65□□□□□ -1.03
Clk4-203ENSMUST00000109113 Rhox13F6YCR7 232 aa8.65□□□□□ -1.03
Clk4-203ENSMUST00000109113 Adgre1Q61549 931 aa8.65□□□□□ -1.03
Clk4-203ENSMUST00000109113 Znf423Q80TS5 1292 aa8.65□□□□□ -1.03
Clk4-203ENSMUST00000109113 Fgd6Q69ZL1 1399 aa8.64□□□□□ -1.03
Clk4-203ENSMUST00000109113 Q9CQ90 155 aa8.64□□□□□ -1.03
Clk4-203ENSMUST00000109113 Setbp1Q9Z180 1582 aa8.64□□□□□ -1.03
Clk4-203ENSMUST00000109113 Duox2A2AQ99 1517 aa8.63□□□□□ -1.03
Clk4-203ENSMUST00000109113 Il27Q8K3I6 234 aa8.63□□□□□ -1.03
Clk4-203ENSMUST00000109113 AqrQ8CFQ3 1481 aaKnown RBP8.63□□□□□ -1.03
Clk4-203ENSMUST00000109113 Rapgefl1Q68EF8 662 aa8.62□□□□□ -1.03
Clk4-203ENSMUST00000109113 Map3k14Q9WUL6 942 aa8.62□□□□□ -1.03
Clk4-203ENSMUST00000109113 Samd9lQ69Z37 1561 aa8.62□□□□□ -1.03
Clk4-203ENSMUST00000109113 Gpr37l1Q99JG2 481 aa8.62□□□□□ -1.03
Clk4-203ENSMUST00000109113 Abcc1O35379 1528 aa8.61□□□□□ -1.03
Clk4-203ENSMUST00000109113 Adam33Q923W9 797 aa8.61□□□□□ -1.03
Clk4-203ENSMUST00000109113 GnpatP98192 678 aa8.6□□□□□ -1.03
Clk4-203ENSMUST00000109113 Chd1P40201 1711 aa8.59□□□□□ -1.03
Clk4-203ENSMUST00000109113 Tsen34Q8BMZ5 316 aa8.59□□□□□ -1.03
Clk4-203ENSMUST00000109113 Ythdc2B2RR83 1445 aaKnown RBP8.59□□□□□ -1.03
Clk4-203ENSMUST00000109113 Cyp4x1Q6A152 507 aa8.58□□□□□ -1.04
Clk4-203ENSMUST00000109113 Alpk3Q924C5 1678 aa8.58□□□□□ -1.04
Clk4-203ENSMUST00000109113 Ccdc88bQ4QRL3 1481 aa8.58□□□□□ -1.04
Clk4-203ENSMUST00000109113 Cops2P61202 443 aaKnown RBP8.58□□□□□ -1.04
Clk4-203ENSMUST00000109113 Mtfr1Q99MB2 328 aa8.58□□□□□ -1.04
Clk4-203ENSMUST00000109113 Lce1a1Q9CQH5 143 aa8.58□□□□□ -1.04
Clk4-203ENSMUST00000109113 Lce1gQ9D195 139 aa8.58□□□□□ -1.04
Clk4-203ENSMUST00000109113 SmapQ9R0P4 181 aaKnown RBP8.58□□□□□ -1.04
Clk4-203ENSMUST00000109113 Adam26aQ9R158 697 aa8.58□□□□□ -1.04
Clk4-203ENSMUST00000109113 Arhgef11Q68FM7 1552 aa8.57□□□□□ -1.04
Clk4-203ENSMUST00000109113 Top2aQ01320 1528 aaKnown RBP8.57□□□□□ -1.04
Clk4-203ENSMUST00000109113 Ak9G3UYQ4 1894 aa8.57□□□□□ -1.04
Clk4-203ENSMUST00000109113 Ankrd34aB2RW11 495 aa8.57□□□□□ -1.04
Clk4-203ENSMUST00000109113 JunbP09450 344 aaKnown RBP8.57□□□□□ -1.04
Clk4-203ENSMUST00000109113 Caskin2Q8VHK1 1201 aa8.57□□□□□ -1.04
Clk4-203ENSMUST00000109113 AdgbG3UZ78 1657 aa8.56□□□□□ -1.04
Clk4-203ENSMUST00000109113 A030003K21RikA0A1Y7VIM3 128 aa8.56□□□□□ -1.04
Clk4-203ENSMUST00000109113 Hoxb4P10284 250 aa8.56□□□□□ -1.04
Clk4-203ENSMUST00000109113 Grin2aP35436 1464 aa8.55□□□□□ -1.04
Clk4-203ENSMUST00000109113 Grin2cQ01098 1239 aa8.55□□□□□ -1.04
Clk4-203ENSMUST00000109113 Arid5bQ8BM75 1188 aaKnown RBP8.55□□□□□ -1.04
Clk4-203ENSMUST00000109113 AknaQ80VW7 1404 aa8.55□□□□□ -1.04
Clk4-203ENSMUST00000109113 EprsQ8CGC7 1512 aaKnown RBP8.55□□□□□ -1.04
Clk4-203ENSMUST00000109113 Rnf40Q3U319 1001 aa8.54□□□□□ -1.04
Clk4-203ENSMUST00000109113 Ccdc136Q3TVA9 1136 aa8.54□□□□□ -1.04
Clk4-203ENSMUST00000109113 Retreg3Q9CQV4 466 aa8.54□□□□□ -1.04
Clk4-203ENSMUST00000109113 Magi3Q9EQJ9 1476 aa8.53□□□□□ -1.04
Clk4-203ENSMUST00000109113 Rgs9O54828 675 aa8.53□□□□□ -1.04
Clk4-203ENSMUST00000109113 IrgqQ8VIM9 583 aa8.53□□□□□ -1.04
Clk4-203ENSMUST00000109113 CadpsQ80TJ1 1355 aa8.53□□□□□ -1.04
Clk4-203ENSMUST00000109113 Grin2bQ01097 1482 aa8.53□□□□□ -1.04
Clk4-203ENSMUST00000109113 Cyp7a1Q64505 503 aa8.52□□□□□ -1.05
Clk4-203ENSMUST00000109113 Wdr44Q6NVE8 915 aa8.51□□□□□ -1.05
Clk4-203ENSMUST00000109113 Ppp1r18Q8BQ30 594 aa8.51□□□□□ -1.05
Clk4-203ENSMUST00000109113 Pde8bE9Q4S1 865 aa8.51□□□□□ -1.05
Clk4-203ENSMUST00000109113 Map3k9Q3U1V8 1077 aa8.51□□□□□ -1.05
Clk4-203ENSMUST00000109113 Gmpr2Q99L27 348 aa8.51□□□□□ -1.05
Clk4-203ENSMUST00000109113 AI481877A2ALV5 1481 aa8.5□□□□□ -1.05
Clk4-203ENSMUST00000109113 Mapkbp1Q6NS57 1503 aa8.5□□□□□ -1.05
Clk4-203ENSMUST00000109113 Clasp1Q80TV8 1535 aaKnown RBP8.5□□□□□ -1.05
Clk4-203ENSMUST00000109113 Ttc37F8VPK0 1563 aa8.5□□□□□ -1.05
Clk4-203ENSMUST00000109113 Jmjd4Q8BFT6 427 aa8.5□□□□□ -1.05
Clk4-203ENSMUST00000109113 Man1a2P39098 641 aa8.49□□□□□ -1.05
Clk4-203ENSMUST00000109113 Skap1Q3UUV5 355 aa8.49□□□□□ -1.05
Clk4-203ENSMUST00000109113 Dnmt1P13864 1620 aaKnown RBP8.49□□□□□ -1.05
Clk4-203ENSMUST00000109113 Neo1P97798 1493 aa8.48□□□□□ -1.05
Clk4-203ENSMUST00000109113 Gm9508A0A1W2P7W0 230 aa8.48□□□□□ -1.05
Clk4-203ENSMUST00000109113 Soga1E1U8D0 1418 aa8.48□□□□□ -1.05
Clk4-203ENSMUST00000109113 Acin1Q9JIX8 1338 aaKnown RBP8.48□□□□□ -1.05
Clk4-203ENSMUST00000109113 Rad54l2Q99NG0 1466 aa8.48□□□□□ -1.05
Clk4-203ENSMUST00000109113 CatipB9EKE5 520 aa8.47□□□□□ -1.05
Clk4-203ENSMUST00000109113 Efcab5A0JP43 1406 aa8.47□□□□□ -1.05
Clk4-203ENSMUST00000109113 Dph2Q9CR25 489 aa8.47□□□□□ -1.05
Clk4-203ENSMUST00000109113 Arhgef12Q8R4H2 1543 aaKnown RBP8.46□□□□□ -1.06
Clk4-203ENSMUST00000109113 BC005561E9Q5E2 1589 aa8.45□□□□□ -1.06
Clk4-203ENSMUST00000109113 XpcP51612 930 aa8.44□□□□□ -1.06
Clk4-203ENSMUST00000109113 Map3k4O08648 1597 aa8.44□□□□□ -1.06
Clk4-203ENSMUST00000109113 Fmn1Q05860 1466 aa8.44□□□□□ -1.06
Clk4-203ENSMUST00000109113 Gm14025A2AP89 1413 aa8.43□□□□□ -1.06
Clk4-203ENSMUST00000109113 Pla2r1Q62028 1487 aa8.43□□□□□ -1.06
Clk4-203ENSMUST00000109113 Ercc6l2Q9JIM3 1537 aa8.43□□□□□ -1.06
Clk4-203ENSMUST00000109113 Hecw2Q6I6G8 1578 aa8.43□□□□□ -1.06
Clk4-203ENSMUST00000109113 MsmpB1AWI6 139 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms