RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 Akap12Q9WTQ5 1684 aa23.83■■□□□ 1.41
Vps53-203ENSMUST00000108419 Talpid3E9PV87 1520 aa23.83■■□□□ 1.41
Vps53-203ENSMUST00000108419 Prdm2A2A7B5 1709 aaKnown RBP23.82■■□□□ 1.4
Vps53-203ENSMUST00000108419 RalgapbQ8BQZ4 1484 aa23.82■■□□□ 1.4
Vps53-203ENSMUST00000108419 Knl1Q66JQ7 1612 aa23.82■■□□□ 1.4
Vps53-203ENSMUST00000108419 Stra8P70278 393 aa23.82■■□□□ 1.4
Vps53-203ENSMUST00000108419 Ino80Q6ZPV2 1559 aa23.81■■□□□ 1.4
Vps53-203ENSMUST00000108419 Adgrb3Q80ZF8 1522 aa23.8■■□□□ 1.4
Vps53-203ENSMUST00000108419 Tecpr2Q3UH45 1423 aa23.8■■□□□ 1.4
Vps53-203ENSMUST00000108419 Kdm2aP59997 1161 aa23.79■■□□□ 1.4
Vps53-203ENSMUST00000108419 Ncoa1P70365 1447 aa23.79■■□□□ 1.4
Vps53-203ENSMUST00000108419 Ehbp1l1Q99MS7 1716 aa23.79■■□□□ 1.4
Vps53-203ENSMUST00000108419 CltcQ68FD5 1675 aaKnown RBP23.78■■□□□ 1.4
Vps53-203ENSMUST00000108419 Hfm1D3Z4R1 1434 aa23.76■■□□□ 1.39
Vps53-203ENSMUST00000108419 Rsph4aQ8BYM7 716 aa23.76■■□□□ 1.39
Vps53-203ENSMUST00000108419 Anp32aO35381 247 aa23.75■■□□□ 1.39
Vps53-203ENSMUST00000108419 Cwc22Q8C5N3 908 aaKnown RBP23.75■■□□□ 1.39
Vps53-203ENSMUST00000108419 Efcab6Q6P1E8 1516 aa23.75■■□□□ 1.39
Vps53-203ENSMUST00000108419 Skint5A7XUY5 1461 aa23.74■■□□□ 1.39
Vps53-203ENSMUST00000108419 Myom2Q14BI5 1463 aa23.73■■□□□ 1.39
Vps53-203ENSMUST00000108419 Adamtsl3G3UXC7 1706 aa23.72■■□□□ 1.39
Vps53-203ENSMUST00000108419 Zbtb4Q5F293 982 aa23.71■■□□□ 1.39
Vps53-203ENSMUST00000108419 DiexfQ8BTT6 772 aaKnown RBP23.71■■□□□ 1.39
Vps53-203ENSMUST00000108419 Arhgap23Q69ZH9 1483 aa23.69■■□□□ 1.38
Vps53-203ENSMUST00000108419 RictorQ6QI06 1708 aa23.68■■□□□ 1.38
Vps53-203ENSMUST00000108419 AU022751B1B0V2 589 aa23.67■■□□□ 1.38
Vps53-203ENSMUST00000108419 Rims1Q99NE5 1463 aa23.67■■□□□ 1.38
Vps53-203ENSMUST00000108419 Ahdc1Q6PAL7 1594 aaKnown RBP23.66■■□□□ 1.38
Vps53-203ENSMUST00000108419 Os9Q8K2C7 672 aa23.66■■□□□ 1.38
Vps53-203ENSMUST00000108419 Gm20521D3Z5F7 333 aa23.65■■□□□ 1.38
Vps53-203ENSMUST00000108419 Bcl11aQ9QYE3 773 aa23.65■■□□□ 1.38
Vps53-203ENSMUST00000108419 Mroh1E0CZ22 1640 aa23.65■■□□□ 1.38
Vps53-203ENSMUST00000108419 Myo3aQ8K3H5 1613 aa23.65■■□□□ 1.38
Vps53-203ENSMUST00000108419 Fan1Q69ZT1 1020 aa23.64■■□□□ 1.38
Vps53-203ENSMUST00000108419 Uggt1Q6P5E4 1551 aa23.64■■□□□ 1.37
Vps53-203ENSMUST00000108419 Cep152A2AUM9 1736 aaKnown RBP23.63■■□□□ 1.37
Vps53-203ENSMUST00000108419 Srpk2O54781 681 aaKnown RBP23.63■■□□□ 1.37
Vps53-203ENSMUST00000108419 Safb2Q80YR5 991 aaKnown RBP23.61■■□□□ 1.37
Vps53-203ENSMUST00000108419 Rock2P70336 1388 aa23.59■■□□□ 1.37
Vps53-203ENSMUST00000108419 Plekhg5Q66T02 1073 aa23.59■■□□□ 1.37
Vps53-203ENSMUST00000108419 Prrc2bQ7TPM1 1486 aaKnown RBP23.58■■□□□ 1.37
Vps53-203ENSMUST00000108419 Ercc6l2Q9JIM3 1537 aa23.58■■□□□ 1.37
Vps53-203ENSMUST00000108419 Slc24a1Q91WD8 1130 aa23.57■■□□□ 1.36
Vps53-203ENSMUST00000108419 Kif13aQ9EQW7 1749 aa23.57■■□□□ 1.36
Vps53-203ENSMUST00000108419 Srcin1Q9QWI6 1250 aa23.57■■□□□ 1.36
Vps53-203ENSMUST00000108419 PtprmP28828 1452 aa23.57■■□□□ 1.36
Vps53-203ENSMUST00000108419 Cdk5rap2Q8K389 1822 aa23.57■■□□□ 1.36
Vps53-203ENSMUST00000108419 Itsn1Q9Z0R4 1714 aa23.54■■□□□ 1.36
Vps53-203ENSMUST00000108419 Calr4Q3TQS0 420 aa23.54■■□□□ 1.36
Vps53-203ENSMUST00000108419 Plxnc1Q9QZC2 1574 aa23.53■■□□□ 1.36
Vps53-203ENSMUST00000108419 Puf60Q3UEB3 564 aaKnown RBP23.53■■□□□ 1.36
Vps53-203ENSMUST00000108419 Rtl5Q5DTT4 599 aa23.53■■□□□ 1.36
Vps53-203ENSMUST00000108419 Usp40Q8BWR4 1235 aa23.53■■□□□ 1.36
Vps53-203ENSMUST00000108419 Med14A2ABV5 1459 aaKnown RBP23.52■■□□□ 1.36
Vps53-203ENSMUST00000108419 Setd1aE9PYH6 1716 aa23.51■■□□□ 1.35
Vps53-203ENSMUST00000108419 Myom1Q62234 1667 aaKnown RBP23.51■■□□□ 1.35
Vps53-203ENSMUST00000108419 Naip7Q9JIB3 1402 aa23.51■■□□□ 1.35
Vps53-203ENSMUST00000108419 Nolc1E9Q5C9 702 aaKnown RBP23.49■■□□□ 1.35
Vps53-203ENSMUST00000108419 Atp1b4Q99ME6 356 aa23.48■■□□□ 1.35
Vps53-203ENSMUST00000108419 Gtf2e1Q9D0D5 440 aa23.48■■□□□ 1.35
Vps53-203ENSMUST00000108419 Smg6P61406 1418 aaKnown RBP23.47■■□□□ 1.35
Vps53-203ENSMUST00000108419 P3h3Q8CG70 732 aa23.46■■□□□ 1.35
Vps53-203ENSMUST00000108419 Slc52a2Q9D8F3 450 aa23.46■■□□□ 1.35
Vps53-203ENSMUST00000108419 Sipa1l1Q8C0T5 1782 aa23.45■■□□□ 1.34
Vps53-203ENSMUST00000108419 Nphp4P59240 1425 aa23.44■■□□□ 1.34
Vps53-203ENSMUST00000108419 Shq1Q7TMX5 569 aa23.44■■□□□ 1.34
Vps53-203ENSMUST00000108419 Stard8Q8K031 1019 aa23.43■■□□□ 1.34
Vps53-203ENSMUST00000108419 Pola1P33609 1465 aa23.42■■□□□ 1.34
Vps53-203ENSMUST00000108419 DnmbpQ6TXD4 1580 aa23.4■■□□□ 1.34
Vps53-203ENSMUST00000108419 Q9D9H8 365 aa23.4■■□□□ 1.34
Vps53-203ENSMUST00000108419 Lrrc7Q80TE7 1490 aa23.39■■□□□ 1.34
Vps53-203ENSMUST00000108419 Stag3O70576 1240 aa23.37■■□□□ 1.33
Vps53-203ENSMUST00000108419 Txndc2Q6P902 515 aa23.37■■□□□ 1.33
Vps53-203ENSMUST00000108419 Stk26Q99JT2 416 aa23.37■■□□□ 1.33
Vps53-203ENSMUST00000108419 Chd2E9PZM4 1827 aaKnown RBP23.37■■□□□ 1.33
Vps53-203ENSMUST00000108419 MyclP10166 368 aa23.36■■□□□ 1.33
Vps53-203ENSMUST00000108419 PalldQ9ET54 1408 aa23.35■■□□□ 1.33
Vps53-203ENSMUST00000108419 Arhgef28P97433 1693 aa23.35■■□□□ 1.33
Vps53-203ENSMUST00000108419 Tubgcp6G5E8P0 1769 aa23.34■■□□□ 1.33
Vps53-203ENSMUST00000108419 Dip2bQ3UH60 1574 aa23.34■■□□□ 1.33
Vps53-203ENSMUST00000108419 Pank3Q8R2W9 370 aa23.34■■□□□ 1.33
Vps53-203ENSMUST00000108419 Zc3h13E9Q784 1729 aaKnown RBP23.34■■□□□ 1.33
Vps53-203ENSMUST00000108419 PrxO55103 1391 aa23.33■■□□□ 1.33
Vps53-203ENSMUST00000108419 Itsn2Q9Z0R6 1659 aa23.33■■□□□ 1.33
Vps53-203ENSMUST00000108419 Psme1P97371 249 aa23.33■■□□□ 1.33
Vps53-203ENSMUST00000108419 IqubQ8CDK3 788 aa23.33■■□□□ 1.33
Vps53-203ENSMUST00000108419 Asxl2Q8BZ32 1370 aa23.33■■□□□ 1.32
Vps53-203ENSMUST00000108419 Gm13695A2AK44 830 aa23.32■■□□□ 1.32
Vps53-203ENSMUST00000108419 MlecQ6ZQI3 291 aaKnown RBP23.32■■□□□ 1.32
Vps53-203ENSMUST00000108419 Supt16hQ920B9 1047 aa23.32■■□□□ 1.32
Vps53-203ENSMUST00000108419 Wwc2Q6NXJ0 1187 aa23.31■■□□□ 1.32
Vps53-203ENSMUST00000108419 4930407I10RikD3Z5T8 1512 aa23.31■■□□□ 1.32
Vps53-203ENSMUST00000108419 PplQ9R269 1755 aa23.31■■□□□ 1.32
Vps53-203ENSMUST00000108419 Slc4a1apE9PX68 744 aa23.3■■□□□ 1.32
Vps53-203ENSMUST00000108419 Ift172Q6VH22 1749 aa23.3■■□□□ 1.32
Vps53-203ENSMUST00000108419 Kdm5aQ3UXZ9 1690 aa23.3■■□□□ 1.32
Vps53-203ENSMUST00000108419 Inpp5dQ9ES52 1191 aa23.29■■□□□ 1.32
Vps53-203ENSMUST00000108419 Alpk3Q924C5 1678 aa23.29■■□□□ 1.32
Vps53-203ENSMUST00000108419 IghaA0A0A6YXW6 389 aa23.29■■□□□ 1.32
Vps53-203ENSMUST00000108419 Sbno1Q689Z5 1390 aa23.27■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms