RNA–Protein interactions for RNA: ENSMUST00000108321.1

Hps3-202, Transcript of Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

TSL 1 (best) BASIC

Gene Hps3, Length 3,385 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3-202ENSMUST00000108321 Htatsf1Q8BGC0 757 aa17.03■□□□□ 0.32
Hps3-202ENSMUST00000108321 Abca16E9PWJ7 1678 aa17.03■□□□□ 0.32
Hps3-202ENSMUST00000108321 Mink1Q9JM52 1308 aa17.02■□□□□ 0.31
Hps3-202ENSMUST00000108321 Sall3Q62255 1320 aa17.01■□□□□ 0.31
Hps3-202ENSMUST00000108321 Fan1Q69ZT1 1020 aa17.01■□□□□ 0.31
Hps3-202ENSMUST00000108321 Atxn3Q9CVD2 355 aa17■□□□□ 0.31
Hps3-202ENSMUST00000108321 Trappc8E9PWG2 1437 aa17■□□□□ 0.31
Hps3-202ENSMUST00000108321 Rab3gap2Q8BMG7 1366 aa17■□□□□ 0.31
Hps3-202ENSMUST00000108321 Mfap1aC0HKD8 439 aaKnown RBP17■□□□□ 0.31
Hps3-202ENSMUST00000108321 Mfap1bC0HKD9 439 aaKnown RBP17■□□□□ 0.31
Hps3-202ENSMUST00000108321 Znf330Q922H9 316 aa17■□□□□ 0.31
Hps3-202ENSMUST00000108321 Senp3Q9EP97 568 aaKnown RBP16.99■□□□□ 0.31
Hps3-202ENSMUST00000108321 TnikP83510 1323 aa16.98■□□□□ 0.31
Hps3-202ENSMUST00000108321 AU015836B2RUM3 263 aa16.98■□□□□ 0.31
Hps3-202ENSMUST00000108321 Srpk2O54781 681 aaKnown RBP16.98■□□□□ 0.31
Hps3-202ENSMUST00000108321 Tnpo1Q8BFY9 898 aaKnown RBP16.98■□□□□ 0.31
Hps3-202ENSMUST00000108321 Abcc2Q8VI47 1543 aa16.98■□□□□ 0.31
Hps3-202ENSMUST00000108321 Setd1bQ8CFT2 1985 aa16.98■□□□□ 0.31
Hps3-202ENSMUST00000108321 Cpsf1Q9EPU4 1441 aaKnown RBP16.98■□□□□ 0.31
Hps3-202ENSMUST00000108321 Plcb2A3KGF7 1181 aa16.97■□□□□ 0.31
Hps3-202ENSMUST00000108321 Kif3bQ61771 747 aa16.97■□□□□ 0.31
Hps3-202ENSMUST00000108321 Taok2Q6ZQ29 1240 aa16.97■□□□□ 0.31
Hps3-202ENSMUST00000108321 Ksr2Q3UVC0 959 aa16.97■□□□□ 0.31
Hps3-202ENSMUST00000108321 Gtf2e1Q9D0D5 440 aa16.97■□□□□ 0.31
Hps3-202ENSMUST00000108321 DekQ7TNV0 380 aaKnown RBP16.96■□□□□ 0.31
Hps3-202ENSMUST00000108321 Spag9Q58A65 1321 aaKnown RBP16.96■□□□□ 0.31
Hps3-202ENSMUST00000108321 Arhgef11Q68FM7 1552 aa16.96■□□□□ 0.31
Hps3-202ENSMUST00000108321 Pde4cQ3UEI1 686 aa16.95■□□□□ 0.3
Hps3-202ENSMUST00000108321 Atp7aQ64430 1491 aa16.95■□□□□ 0.3
Hps3-202ENSMUST00000108321 Rtn4Q99P72 1162 aaKnown RBP16.95■□□□□ 0.3
Hps3-202ENSMUST00000108321 Lamc1P02468 1607 aaKnown RBP16.95■□□□□ 0.3
Hps3-202ENSMUST00000108321 Ppp1r9bQ6R891 817 aaKnown RBP16.94■□□□□ 0.3
Hps3-202ENSMUST00000108321 Arhgap5P97393 1501 aa16.93■□□□□ 0.3
Hps3-202ENSMUST00000108321 Apaf1O88879 1249 aa16.92■□□□□ 0.3
Hps3-202ENSMUST00000108321 Usp40Q8BWR4 1235 aa16.92■□□□□ 0.3
Hps3-202ENSMUST00000108321 Ssh2Q5SW75 1423 aa16.91■□□□□ 0.3
Hps3-202ENSMUST00000108321 Rlbp1Q9Z275 317 aa16.91■□□□□ 0.3
Hps3-202ENSMUST00000108321 Fgd6Q69ZL1 1399 aa16.9■□□□□ 0.3
Hps3-202ENSMUST00000108321 U2af1Q9D883 239 aaKnown RBP16.9■□□□□ 0.3
Hps3-202ENSMUST00000108321 Kif21bQ9QXL1 1668 aa16.9■□□□□ 0.3
Hps3-202ENSMUST00000108321 Pnmal2G3X9N3 661 aa16.9■□□□□ 0.3
Hps3-202ENSMUST00000108321 Trim58Q5NCC9 485 aa16.89■□□□□ 0.3
Hps3-202ENSMUST00000108321 Lrriq1Q0P5X1 1673 aa16.89■□□□□ 0.29
Hps3-202ENSMUST00000108321 Atp1b4Q99ME6 356 aa16.89■□□□□ 0.29
Hps3-202ENSMUST00000108321 Duxf3A0A0N4SV92 674 aa16.88■□□□□ 0.29
Hps3-202ENSMUST00000108321 Ralbp1Q62172 648 aa16.87■□□□□ 0.29
Hps3-202ENSMUST00000108321 Kdm5cP41230 1554 aa16.87■□□□□ 0.29
Hps3-202ENSMUST00000108321 Rfx1P48377 963 aa16.86■□□□□ 0.29
Hps3-202ENSMUST00000108321 Dot1lQ6XZL8 1540 aa16.86■□□□□ 0.29
Hps3-202ENSMUST00000108321 Mroh2aD3Z750 1679 aa16.86■□□□□ 0.29
Hps3-202ENSMUST00000108321 Sptbn5F6UCX4 1208 aa16.86■□□□□ 0.29
Hps3-202ENSMUST00000108321 Gm14025A2AP89 1413 aa16.85■□□□□ 0.29
Hps3-202ENSMUST00000108321 DroshaQ5HZJ0 1373 aaKnown RBP16.85■□□□□ 0.29
Hps3-202ENSMUST00000108321 Ppp2r3aB2RXC8 1150 aa16.85■□□□□ 0.29
Hps3-202ENSMUST00000108321 Stag3O70576 1240 aa16.85■□□□□ 0.29
Hps3-202ENSMUST00000108321 Tex14Q7M6U3 1450 aa16.85■□□□□ 0.29
Hps3-202ENSMUST00000108321 Pdcl3Q8BVF2 240 aa16.85■□□□□ 0.29
Hps3-202ENSMUST00000108321 Kiaa1551Q5DTW7 1521 aa16.84■□□□□ 0.29
Hps3-202ENSMUST00000108321 Nutm1Q8BHP2 1126 aa16.84■□□□□ 0.29
Hps3-202ENSMUST00000108321 Cdc42bpaQ3UU96 1719 aa16.84■□□□□ 0.29
Hps3-202ENSMUST00000108321 Mlh3A0A1Y7VMP7 1443 aa16.84■□□□□ 0.29
Hps3-202ENSMUST00000108321 SlkO54988 1233 aa16.84■□□□□ 0.29
Hps3-202ENSMUST00000108321 GorabQ8BRM2 368 aa16.83■□□□□ 0.28
Hps3-202ENSMUST00000108321 GsdmaQ9EST1 446 aa16.83■□□□□ 0.28
Hps3-202ENSMUST00000108321 Ppp1r3fQ9JIG4 799 aa16.83■□□□□ 0.28
Hps3-202ENSMUST00000108321 PtprgQ05909 1442 aa16.82■□□□□ 0.28
Hps3-202ENSMUST00000108321 Rabep1O35551 862 aa16.81■□□□□ 0.28
Hps3-202ENSMUST00000108321 Mapkbp1Q6NS57 1503 aa16.81■□□□□ 0.28
Hps3-202ENSMUST00000108321 Ylpm1Q9R0I7 1386 aaKnown RBP16.81■□□□□ 0.28
Hps3-202ENSMUST00000108321 Tmco5bQ80X59 307 aa16.81■□□□□ 0.28
Hps3-202ENSMUST00000108321 Tsen2Q6P7W5 460 aa16.8■□□□□ 0.28
Hps3-202ENSMUST00000108321 Uspl1Q3ULM6 1089 aa16.8■□□□□ 0.28
Hps3-202ENSMUST00000108321 Fancd2Q80V62 1450 aa16.79■□□□□ 0.28
Hps3-202ENSMUST00000108321 Tarbp1E9Q368 1579 aa16.79■□□□□ 0.28
Hps3-202ENSMUST00000108321 Plppr3Q7TPB0 716 aa16.79■□□□□ 0.28
Hps3-202ENSMUST00000108321 Trim44Q9QXA7 346 aa16.79■□□□□ 0.28
Hps3-202ENSMUST00000108321 Ssh1Q76I79 1042 aa16.78■□□□□ 0.28
Hps3-202ENSMUST00000108321 Lemd3Q9WU40 921 aa16.78■□□□□ 0.28
Hps3-202ENSMUST00000108321 Plch2A2AP18 1501 aa16.78■□□□□ 0.28
Hps3-202ENSMUST00000108321 Usp19Q3UJD6 1360 aa16.78■□□□□ 0.28
Hps3-202ENSMUST00000108321 Paxip1Q6NZQ4 1056 aa16.78■□□□□ 0.28
Hps3-202ENSMUST00000108321 Aplp1Q03157 653 aa16.77■□□□□ 0.28
Hps3-202ENSMUST00000108321 Kcnn1Q9EQR3 537 aa16.77■□□□□ 0.28
Hps3-202ENSMUST00000108321 Gm16486A0A1D5RMD1 1434 aa16.77■□□□□ 0.28
Hps3-202ENSMUST00000108321 Catsper2A2ARP9 588 aa16.77■□□□□ 0.28
Hps3-202ENSMUST00000108321 Stk26Q99JT2 416 aa16.77■□□□□ 0.28
Hps3-202ENSMUST00000108321 Nectin2P32507 530 aa16.77■□□□□ 0.27
Hps3-202ENSMUST00000108321 Lrrc9Q8CDN9 1456 aa16.76■□□□□ 0.27
Hps3-202ENSMUST00000108321 Caskin1Q6P9K8 1431 aa16.76■□□□□ 0.27
Hps3-202ENSMUST00000108321 Exosc9Q9JHI7 438 aaKnown RBP16.75■□□□□ 0.27
Hps3-202ENSMUST00000108321 Trpm2Q91YD4 1506 aa16.75■□□□□ 0.27
Hps3-202ENSMUST00000108321 Stk11ipQ3TAA7 1072 aa16.75■□□□□ 0.27
Hps3-202ENSMUST00000108321 Ccdc60Q8C4J0 545 aa16.75■□□□□ 0.27
Hps3-202ENSMUST00000108321 Ccar1Q8CH18 1146 aaKnown RBP16.74■□□□□ 0.27
Hps3-202ENSMUST00000108321 Atf7ipQ7TT18 1306 aa16.73■□□□□ 0.27
Hps3-202ENSMUST00000108321 Il4rP16382 810 aa16.73■□□□□ 0.27
Hps3-202ENSMUST00000108321 Znf608Q56A10 1511 aa16.73■□□□□ 0.27
Hps3-202ENSMUST00000108321 Mcm4P49717 862 aa16.72■□□□□ 0.27
Hps3-202ENSMUST00000108321 Cog6Q8R3I3 657 aa16.72■□□□□ 0.27
Hps3-202ENSMUST00000108321 Zranb1Q7M760 708 aa16.72■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms