RNA–Protein interactions for RNA: ENSMUST00000096386.12

Rnf41-201, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-201ENSMUST00000096386 Plcb2A3KGF7 1181 aa13.67□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Kiaa0753Q6A000 959 aa13.67□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Abca16E9PWJ7 1678 aa13.67□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Rundc1Q0VDN7 615 aa13.67□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Ppp1r18Q8BQ30 594 aa13.67□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Polr1aO35134 1717 aaKnown RBP13.66□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Plekhh1Q80TI1 1356 aa13.66□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Catsper2A2ARP9 588 aa13.66□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Chmp4bQ9D8B3 224 aaKnown RBP13.66□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Pik3c2gO70167 1506 aa13.65□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Kif16bB1AVY7 1312 aa13.65□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Sox12Q04890 314 aa13.65□□□□□ -0.22
Rnf41-201ENSMUST00000096386 Mbd5B1AYB6 1498 aa13.65□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Cep170Q6A065 1588 aa13.64□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Apbb1Q9QXJ1 710 aa13.64□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Stac3Q8BZ71 360 aa13.64□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Card11Q8CIS0 1159 aa13.63□□□□□ -0.23
Rnf41-201ENSMUST00000096386 PtprtQ99M80 1454 aa13.63□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Dnmt1P13864 1620 aaKnown RBP13.62□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Tbc1d32Q3URV1 1296 aa13.62□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Erich6bQ9D4S6 220 aa13.62□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Ccdc94Q9D6J3 314 aa13.62□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Becn1O88597 448 aa13.62□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Map3k4O08648 1597 aa13.61□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Terf2O35144 541 aa13.61□□□□□ -0.23
Rnf41-201ENSMUST00000096386 KarsQ99MN1 595 aaKnown RBP13.61□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Kif27Q7M6Z4 1394 aa13.6□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Ddit3P35639 168 aa13.6□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Mug2P28666 1451 aa13.6□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Fez1Q8K0X8 392 aa13.59□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Ccnb3Q810T2 1396 aa13.59□□□□□ -0.23
Rnf41-201ENSMUST00000096386 CrbnQ8C7D2 445 aa13.59□□□□□ -0.23
Rnf41-201ENSMUST00000096386 BC005561E9Q5E2 1589 aa13.58□□□□□ -0.23
Rnf41-201ENSMUST00000096386 Arhgap31A6X8Z5 1425 aa13.58□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Clasp1Q80TV8 1535 aaKnown RBP13.58□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Zcchc11B2RX14 1644 aaKnown RBP13.58□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Ppp2r3aB2RXC8 1150 aa13.58□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Rfx7F8VPJ6 1459 aa13.58□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Tspyl2Q7TQI8 677 aa13.57□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Rock1P70335 1354 aa13.57□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Esx1O88933 382 aa13.57□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Zhx1P70121 873 aa13.57□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Gpatch8A2A6A1 1505 aa13.57□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Gzf1Q4VBD9 706 aa13.57□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Fam13bQ8K2H3 851 aa13.56□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Plcd3Q8K2J0 785 aa13.56□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Arid4bA2CG63 1314 aaKnown RBP13.56□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Rgl3Q3UYI5 709 aa13.55□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Rps6ka5Q8C050 863 aa13.55□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Zfp644E9QA22 1323 aa13.54□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Ylpm1Q9R0I7 1386 aaKnown RBP13.54□□□□□ -0.24
Rnf41-201ENSMUST00000096386 ScaperF8VQ70 1398 aaKnown RBP13.54□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Pcdh10E9PXQ7 1057 aa13.53□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Pnma3Q8JZW8 466 aa13.53□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Lmtk2Q3TYD6 1471 aa13.53□□□□□ -0.24
Rnf41-201ENSMUST00000096386 Kif14L0N7N1 1674 aaKnown RBP13.52□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Lamc1P02468 1607 aaKnown RBP13.52□□□□□ -0.25
Rnf41-201ENSMUST00000096386 NcapgE9PWG6 1004 aa13.52□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Wdr78E9PYY5 807 aa13.52□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Rsph3aQ3UFY4 516 aa13.52□□□□□ -0.25
Rnf41-201ENSMUST00000096386 RalgapbQ8BQZ4 1484 aa13.51□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Chd1P40201 1711 aa13.51□□□□□ -0.25
Rnf41-201ENSMUST00000096386 MpndQ3TV65 487 aa13.51□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Rlbp1Q9Z275 317 aa13.51□□□□□ -0.25
Rnf41-201ENSMUST00000096386 FanciQ8K368 1330 aa13.51□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Gtpbp6Q3U6U5 514 aa13.5□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Tubgcp6G5E8P0 1769 aa13.5□□□□□ -0.25
Rnf41-201ENSMUST00000096386 MsnP26041 577 aaKnown RBP13.5□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Cbx1P83917 185 aaKnown RBP13.5□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Znf326O88291 580 aa13.5□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Fam114a1Q9D281 569 aa13.5□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Igf1rQ60751 1373 aa13.49□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Tex14Q7M6U3 1450 aa13.49□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Lmod3E9QA62 571 aa13.49□□□□□ -0.25
Rnf41-201ENSMUST00000096386 AI481877A2ALV5 1481 aa13.49□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Pank2Q3U4S0 443 aa13.49□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Tmx3Q8BXZ1 456 aa13.49□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Kif2cQ922S8 721 aa13.49□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Mfap1aC0HKD8 439 aaKnown RBP13.48□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Mfap1bC0HKD9 439 aaKnown RBP13.48□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Cers3Q1A3B0 383 aa13.48□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Plch2A2AP18 1501 aa13.48□□□□□ -0.25
Rnf41-201ENSMUST00000096386 SphkapQ6NSW3 1687 aa13.48□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Znf521Q6KAS7 1311 aa13.48□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Cdk13Q69ZA1 1511 aaKnown RBP13.48□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Pank3Q8R2W9 370 aa13.48□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Nsfl1cQ9CZ44 370 aaKnown RBP13.48□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Ccdc141E9Q8Q6 1531 aa13.47□□□□□ -0.25
Rnf41-201ENSMUST00000096386 PtmaP26350 111 aa13.46□□□□□ -0.25
Rnf41-201ENSMUST00000096386 Nectin2P32507 530 aa13.46□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Pank1Q8K4K6 548 aa13.46□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Cabp1Q9JLK7 227 aa13.46□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Duxf3A0A0N4SV92 674 aa13.45□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Vsig10D3YX43 558 aa13.45□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Rfx1P48377 963 aa13.45□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Kank4Q6P9J5 1016 aa13.45□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Mindy4Q3UQI9 744 aa13.44□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Speer4f1Q9D5Q6 258 aa13.44□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Gcc2Q8CHG3 1679 aa13.44□□□□□ -0.26
Rnf41-201ENSMUST00000096386 Atp2b3Q0VF55 1220 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms