RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Nkx1-2P42580 305 aa15.08■□□□□ 0
Col9a1-202ENSMUST00000088349 Rangap1P46061 589 aaKnown RBP15.08■□□□□ 0
Col9a1-202ENSMUST00000088349 Kdm5cP41230 1554 aa15.08■□□□□ 0
Col9a1-202ENSMUST00000088349 Dnai1Q8C0M8 701 aa15.07■□□□□ 0
Col9a1-202ENSMUST00000088349 Tarbp1E9Q368 1579 aa15.06■□□□□ 0
Col9a1-202ENSMUST00000088349 NudcO35685 332 aaKnown RBP15.06■□□□□ 0
Col9a1-202ENSMUST00000088349 Plcd4Q8K3R3 807 aa15.06■□□□□ 0
Col9a1-202ENSMUST00000088349 Mbd3Q9Z2D8 285 aaKnown RBP15.06■□□□□ 0
Col9a1-202ENSMUST00000088349 Lrrc9Q8CDN9 1456 aa15.06■□□□□ 0
Col9a1-202ENSMUST00000088349 Dcaf11Q91VU6 549 aa15.05■□□□□ 0
Col9a1-202ENSMUST00000088349 Fam184bQ0KK56 942 aa15.05■□□□□ -0
Col9a1-202ENSMUST00000088349 TnikP83510 1323 aa15.05■□□□□ -0
Col9a1-202ENSMUST00000088349 Ak9G3UYQ4 1894 aa15.04■□□□□ -0
Col9a1-202ENSMUST00000088349 Atp10dQ8K2X1 1416 aa15.04■□□□□ -0
Col9a1-202ENSMUST00000088349 Iqgap1Q9JKF1 1657 aaKnown RBP15.04■□□□□ -0
Col9a1-202ENSMUST00000088349 Srpk2O54781 681 aaKnown RBP15.03■□□□□ -0
Col9a1-202ENSMUST00000088349 Polr3glQ8R0C0 218 aa15.03■□□□□ -0
Col9a1-202ENSMUST00000088349 Atp1b4Q99ME6 356 aa15.03■□□□□ -0
Col9a1-202ENSMUST00000088349 Kdm2bQ6P1G2 1309 aa15.03■□□□□ -0
Col9a1-202ENSMUST00000088349 Trim26Q99PN3 545 aa15.03■□□□□ -0
Col9a1-202ENSMUST00000088349 Armcx1Q9CX83 456 aa15.03■□□□□ -0
Col9a1-202ENSMUST00000088349 Fmn2Q9JL04 1578 aa15.02■□□□□ -0
Col9a1-202ENSMUST00000088349 Tspyl2Q7TQI8 677 aa15.02□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Eif2s2Q99L45 331 aaKnown RBP15.02□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Fam208aQ69ZR9 1610 aaKnown RBP15.01□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Ccdc30Q8BVF4 654 aa15.01□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Kif7B7ZNG0 1348 aa15.01□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Plekhh1Q80TI1 1356 aa15.01□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Rab3gap2Q8BMG7 1366 aa15.01□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Usp40Q8BWR4 1235 aa15.01□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Gapvd1Q6PAR5 1458 aa15□□□□□ -0.01
Col9a1-202ENSMUST00000088349 PtprtQ99M80 1454 aa15□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Plppr3Q7TPB0 716 aa15□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Tex14Q7M6U3 1450 aa15□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Hsp90ab1P11499 724 aaKnown RBP14.99□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Lemd3Q9WU40 921 aa14.99□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Gtf2e1Q9D0D5 440 aa14.99□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Plch2A2AP18 1501 aa14.99□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Rrbp1Q99PL5 1605 aaKnown RBP14.98□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Adgrl2Q8JZZ7 1487 aa14.98□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Ppm1gQ61074 542 aa14.98□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Gas2l2Q5SSG4 860 aa14.98□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Ak7Q9D2H2 614 aa14.98□□□□□ -0.01
Col9a1-202ENSMUST00000088349 AI481877A2ALV5 1481 aa14.97□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Pank1Q8K4K6 548 aa14.97□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Zranb1Q7M760 708 aa14.96□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Golga2Q921M4 999 aa14.96□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Stk26Q99JT2 416 aa14.96□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Chd1P40201 1711 aa14.96□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Smc5Q8CG46 1101 aaKnown RBP14.96□□□□□ -0.01
Col9a1-202ENSMUST00000088349 Gm156Q58A37 223 aa14.96□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Edc4Q3UJB9 1406 aaKnown RBP14.95□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Prdm16A2A935 1275 aa14.95□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Arid4bA2CG63 1314 aaKnown RBP14.95□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Mre11Q61216 706 aa14.95□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Adamts13Q769J6 1426 aa14.94□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Ppp1r18Q8BQ30 594 aa14.94□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Gm16486A0A1D5RMD1 1434 aa14.93□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Stag3O70576 1240 aa14.93□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Ipo8Q7TMY7 1010 aa14.93□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Senp3Q9EP97 568 aaKnown RBP14.93□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Tubgcp6G5E8P0 1769 aa14.92□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Gm32742A0A1B0GT42 1604 aa14.91□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Gm6268A2A3U9 297 aa14.91□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Setd1aE9PYH6 1716 aa14.91□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Mapk8ip3Q9ESN9 1337 aa14.91□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Ttc21bQ0HA38 1315 aa14.9□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Atxn3Q9CVD2 355 aa14.9□□□□□ -0.02
Col9a1-202ENSMUST00000088349 Cdc42bpbQ7TT50 1713 aa14.89□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Spryd3E9Q9B3 442 aa14.89□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Ttc41Q692V3 1318 aa14.89□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Igf1rQ60751 1373 aa14.89□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Ccdc183A2AJB1 534 aa14.89□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Usp19Q3UJD6 1360 aa14.88□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Sbno1Q689Z5 1390 aa14.88□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Puf60Q3UEB3 564 aaKnown RBP14.87□□□□□ -0.03
Col9a1-202ENSMUST00000088349 ErbinQ80TH2 1402 aa14.87□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Nsd2Q8BVE8 1365 aa14.87□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Tulp4Q9JIL5 1547 aa14.87□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Usp54Q8BL06 1588 aaKnown RBP14.86□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Atf7ipQ7TT18 1306 aa14.86□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Ppip5k1A2ARP1 1436 aa14.86□□□□□ -0.03
Col9a1-202ENSMUST00000088349 KarsQ99MN1 595 aaKnown RBP14.86□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Rlbp1Q9Z275 317 aa14.84□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Abcc6Q9R1S7 1498 aa14.83□□□□□ -0.03
Col9a1-202ENSMUST00000088349 Apaf1O88879 1249 aa14.83□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Cluap1Q8R3P7 413 aa14.83□□□□□ -0.04
Col9a1-202ENSMUST00000088349 NhsB1AV60 1647 aa14.83□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Mast1Q9R1L5 1570 aa14.83□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Ralbp1Q62172 648 aa14.82□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Uspl1Q3ULM6 1089 aa14.82□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Rnf17Q99MV7 1640 aa14.82□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Duxf3A0A0N4SV92 674 aa14.81□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Ksr2Q3UVC0 959 aa14.81□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Cep170Q6A065 1588 aa14.81□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Kiaa1107Q80TK0 1369 aa14.81□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Trim58Q5NCC9 485 aa14.8□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Ppp1r9bQ6R891 817 aaKnown RBP14.8□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Col17a1Q07563 1470 aa14.8□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Exosc9Q9JHI7 438 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms