RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 TchhA0A0B4J1F9 1599 aa12.74□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Arhgap5P97393 1501 aa12.74□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Tceal9Q9DD24 104 aa12.73□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Ftsj3Q9DBE9 838 aaKnown RBP12.72□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Hap1O35668 628 aa12.72□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Prdm16A2A935 1275 aa12.72□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Cluap1Q8R3P7 413 aa12.72□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Gm21969J3QJZ1 289 aa12.72□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Gtf3c3Q3TMP1 882 aa12.72□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Erc2Q6PH08 957 aa12.72□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Ccdc141E9Q8Q6 1531 aa12.71□□□□□ -0.37
Scn8a-201ENSMUST00000082209 PnisrA2AJT4 805 aaKnown RBP12.71□□□□□ -0.37
Scn8a-201ENSMUST00000082209 GorabQ8BRM2 368 aa12.71□□□□□ -0.38
Scn8a-201ENSMUST00000082209 UvssaQ9D479 717 aa12.71□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Sin3aQ60520 1274 aaKnown RBP12.7□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Tubb6Q922F4 447 aa12.7□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Chmp3Q9CQ10 224 aa12.7□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Sart1Q9Z315 806 aaKnown RBP12.7□□□□□ -0.38
Scn8a-201ENSMUST00000082209 G3bp1P97855 465 aaKnown RBP12.7□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Fan1Q69ZT1 1020 aa12.7□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Chaf1aQ9QWF0 911 aa12.7□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Gnai1B2RSH2 354 aa12.7□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Gnai3Q9DC51 354 aa12.7□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Gabpb2P81069 414 aa12.69□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Zscan10Q3URR7 782 aa12.69□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Ncapd3Q6ZQK0 1506 aa12.69□□□□□ -0.38
Scn8a-201ENSMUST00000082209 AqrQ8CFQ3 1481 aaKnown RBP12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Gcom1E9PZ54 550 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Kif3cO35066 796 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 MyzapQ3UIJ9 466 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 NaspQ99MD9 773 aaKnown RBP12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Tnnt1O88346 262 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Pdcl3Q8BVF2 240 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Ccdc60Q8C4J0 545 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Crocc2F6XLV1 1638 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Rab3gap2Q8BMG7 1366 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Psma5Q9Z2U1 241 aaKnown RBP12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Soga1E1U8D0 1418 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Ccdc146E9Q9F7 977 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 SlkO54988 1233 aa12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Utp3Q9JI13 469 aaKnown RBP12.68□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Gpatch3Q8BIY1 525 aa12.67□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Lrrcc1Q69ZB0 1026 aa12.67□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Anp32eP97822 260 aaKnown RBP12.67□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Odf2A3KGV1 830 aaKnown RBP12.67□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Ubxn4Q8VCH8 506 aa12.67□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Mroh2bQ7M6Y6 1581 aa12.66□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Gsto1O09131 240 aa12.66□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Usp40Q8BWR4 1235 aa12.66□□□□□ -0.38
Scn8a-201ENSMUST00000082209 DroshaQ5HZJ0 1373 aaKnown RBP12.66□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Utp14aQ640M1 767 aaKnown RBP12.66□□□□□ -0.38
Scn8a-201ENSMUST00000082209 CrebrfQ8CDG5 640 aaKnown RBP12.66□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Znf330Q922H9 316 aa12.66□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Cwc15Q9JHS9 229 aaKnown RBP12.66□□□□□ -0.38
Scn8a-201ENSMUST00000082209 AnlnQ8K298 1121 aaKnown RBP12.66□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Gnl3lQ6PGG6 577 aaKnown RBP12.65□□□□□ -0.38
Scn8a-201ENSMUST00000082209 Asxl1P59598 1514 aa12.64□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Kri1Q8VDQ9 704 aaKnown RBP12.64□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Myom3A2ABU4 1439 aa12.64□□□□□ -0.39
Scn8a-201ENSMUST00000082209 PdcQ9QW08 244 aa12.63□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Znhit6Q3UFB2 460 aaKnown RBP12.63□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Cplx1P63040 134 aa12.63□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Swt1Q9DBQ9 907 aa12.63□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Slc4a10Q5DTL9 1118 aa12.62□□□□□ -0.39
Scn8a-201ENSMUST00000082209 ScaperF8VQ70 1398 aaKnown RBP12.62□□□□□ -0.39
Scn8a-201ENSMUST00000082209 NexnQ7TPW1 607 aa12.62□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Smc2Q8CG48 1191 aaKnown RBP12.62□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Grin2bQ01097 1482 aa12.62□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Eif3aP23116 1344 aaKnown RBP12.62□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Duox2A2AQ99 1517 aa12.62□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Rufy1Q8BIJ7 712 aa12.62□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Smc3Q9CW03 1217 aaKnown RBP12.61□□□□□ -0.39
Scn8a-201ENSMUST00000082209 1700010I14RikQ7TPG0 532 aa12.61□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Chmp7Q8R1T1 451 aa12.61□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Naip1Q9QWK5 1403 aa12.61□□□□□ -0.39
Scn8a-201ENSMUST00000082209 OptnQ8K3K8 584 aa12.61□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Inpp5dQ9ES52 1191 aa12.61□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Arhgap31A6X8Z5 1425 aa12.61□□□□□ -0.39
Scn8a-201ENSMUST00000082209 SkilQ60665 675 aa12.61□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Plin1Q8CGN5 517 aa12.6□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Ints3Q7TPD0 1041 aaKnown RBP12.6□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Rec8Q8C5S7 591 aa12.6□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Gcc1Q9D4H2 778 aa12.6□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Necab1Q8BG18 352 aa12.6□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Camsap1A2AHC3 1581 aa12.6□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Dctn1O08788 1281 aa12.6□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Trim29Q8R2Q0 587 aa12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Ak7Q9D2H2 614 aa12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Il16O54824 1322 aa12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 NinlQ6ZQ12 1394 aa12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Rfx7F8VPJ6 1459 aa12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Fbxo2Q80UW2 297 aa12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Ccdc30Q8BVF4 654 aa12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Cabp4Q8VHC5 271 aa12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Krt82Q99M74 516 aa12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Mns1Q61884 491 aa12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Supt6hQ62383 1726 aaKnown RBP12.59□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Cdkn1cP49919 348 aa12.58□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Gpatch11Q3UFS4 262 aa12.58□□□□□ -0.39
Scn8a-201ENSMUST00000082209 Arid3cA6PWV5 409 aa12.58□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 61.1 ms