RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 NpatQ8BMA5 1420 aa25.11■■□□□ 1.61
Trim58-201ENSMUST00000075084 Ttc21bQ0HA38 1315 aa25.11■■□□□ 1.61
Trim58-201ENSMUST00000075084 Zbtb4Q5F293 982 aa25.09■■□□□ 1.61
Trim58-201ENSMUST00000075084 Sall3Q62255 1320 aa25.08■■□□□ 1.61
Trim58-201ENSMUST00000075084 Tubgcp6G5E8P0 1769 aa25.08■■□□□ 1.6
Trim58-201ENSMUST00000075084 Iqgap3F8VQ29 1632 aa25.06■■□□□ 1.6
Trim58-201ENSMUST00000075084 Plppr3Q7TPB0 716 aa25.04■■□□□ 1.6
Trim58-201ENSMUST00000075084 ErbinQ80TH2 1402 aa25.02■■□□□ 1.6
Trim58-201ENSMUST00000075084 Abca8aQ8K442 1620 aa24.99■■□□□ 1.59
Trim58-201ENSMUST00000075084 Afap1Q80YS6 731 aa24.99■■□□□ 1.59
Trim58-201ENSMUST00000075084 Gm38655A0A286YDK6 273 aa24.98■■□□□ 1.59
Trim58-201ENSMUST00000075084 Kdm2aP59997 1161 aa24.98■■□□□ 1.59
Trim58-201ENSMUST00000075084 Stk24Q99KH8 431 aa24.97■■□□□ 1.59
Trim58-201ENSMUST00000075084 SafbD3YXK2 937 aaKnown RBP24.95■■□□□ 1.58
Trim58-201ENSMUST00000075084 Cep152A2AUM9 1736 aaKnown RBP24.95■■□□□ 1.58
Trim58-201ENSMUST00000075084 Srcin1Q9QWI6 1250 aa24.93■■□□□ 1.58
Trim58-201ENSMUST00000075084 PrxO55103 1391 aa24.92■■□□□ 1.58
Trim58-201ENSMUST00000075084 Pola1P33609 1465 aa24.92■■□□□ 1.58
Trim58-201ENSMUST00000075084 Adamts7Q68SA9 1657 aa24.91■■□□□ 1.58
Trim58-201ENSMUST00000075084 Adgrb3Q80ZF8 1522 aa24.91■■□□□ 1.58
Trim58-201ENSMUST00000075084 Adamtsl3G3UXC7 1706 aa24.91■■□□□ 1.58
Trim58-201ENSMUST00000075084 Ehbp1l1Q99MS7 1716 aa24.91■■□□□ 1.58
Trim58-201ENSMUST00000075084 Pank3Q8R2W9 370 aa24.9■■□□□ 1.58
Trim58-201ENSMUST00000075084 AatkQ80YE4 1365 aa24.9■■□□□ 1.58
Trim58-201ENSMUST00000075084 Talpid3E9PV87 1520 aa24.9■■□□□ 1.58
Trim58-201ENSMUST00000075084 Rsph4aQ8BYM7 716 aa24.9■■□□□ 1.58
Trim58-201ENSMUST00000075084 Prdm2A2A7B5 1709 aaKnown RBP24.89■■□□□ 1.57
Trim58-201ENSMUST00000075084 Os9Q8K2C7 672 aa24.88■■□□□ 1.57
Trim58-201ENSMUST00000075084 Akap12Q9WTQ5 1684 aa24.88■■□□□ 1.57
Trim58-201ENSMUST00000075084 Gm20521D3Z5F7 333 aa24.88■■□□□ 1.57
Trim58-201ENSMUST00000075084 Rims1Q99NE5 1463 aa24.87■■□□□ 1.57
Trim58-201ENSMUST00000075084 CltcQ68FD5 1675 aaKnown RBP24.86■■□□□ 1.57
Trim58-201ENSMUST00000075084 Sbno1Q689Z5 1390 aa24.86■■□□□ 1.57
Trim58-201ENSMUST00000075084 Myo3aQ8K3H5 1613 aa24.86■■□□□ 1.57
Trim58-201ENSMUST00000075084 Calr4Q3TQS0 420 aa24.86■■□□□ 1.57
Trim58-201ENSMUST00000075084 Efcab6Q6P1E8 1516 aa24.85■■□□□ 1.57
Trim58-201ENSMUST00000075084 Eif5bQ05D44 1216 aaKnown RBP24.84■■□□□ 1.57
Trim58-201ENSMUST00000075084 Inpp5dQ9ES52 1191 aa24.84■■□□□ 1.57
Trim58-201ENSMUST00000075084 Ino80Q6ZPV2 1559 aa24.84■■□□□ 1.57
Trim58-201ENSMUST00000075084 Tecpr2Q3UH45 1423 aa24.84■■□□□ 1.57
Trim58-201ENSMUST00000075084 Anp32bQ9EST5 272 aaKnown RBP24.84■■□□□ 1.57
Trim58-201ENSMUST00000075084 Knl1Q66JQ7 1612 aa24.84■■□□□ 1.57
Trim58-201ENSMUST00000075084 Itsn2Q9Z0R6 1659 aa24.83■■□□□ 1.57
Trim58-201ENSMUST00000075084 Rpgrip1lQ8CG73 1264 aa24.83■■□□□ 1.57
Trim58-201ENSMUST00000075084 Hfm1D3Z4R1 1434 aa24.83■■□□□ 1.57
Trim58-201ENSMUST00000075084 Tmf1B9EKI3 1091 aa24.82■■□□□ 1.56
Trim58-201ENSMUST00000075084 Srpk2O54781 681 aaKnown RBP24.82■■□□□ 1.56
Trim58-201ENSMUST00000075084 Myom2Q14BI5 1463 aa24.82■■□□□ 1.56
Trim58-201ENSMUST00000075084 Cdk5rap2Q8K389 1822 aa24.81■■□□□ 1.56
Trim58-201ENSMUST00000075084 Arhgap23Q69ZH9 1483 aa24.8■■□□□ 1.56
Trim58-201ENSMUST00000075084 CenpbP27790 599 aa24.8■■□□□ 1.56
Trim58-201ENSMUST00000075084 Zscan10Q3URR7 782 aa24.8■■□□□ 1.56
Trim58-201ENSMUST00000075084 RictorQ6QI06 1708 aa24.79■■□□□ 1.56
Trim58-201ENSMUST00000075084 Fan1Q69ZT1 1020 aa24.79■■□□□ 1.56
Trim58-201ENSMUST00000075084 Gtf2e1Q9D0D5 440 aa24.78■■□□□ 1.56
Trim58-201ENSMUST00000075084 Slc4a1apE9PX68 744 aa24.77■■□□□ 1.56
Trim58-201ENSMUST00000075084 Stard8Q8K031 1019 aa24.77■■□□□ 1.56
Trim58-201ENSMUST00000075084 Ofd1Q80Z25 1017 aa24.76■■□□□ 1.55
Trim58-201ENSMUST00000075084 Usp40Q8BWR4 1235 aa24.76■■□□□ 1.55
Trim58-201ENSMUST00000075084 Nphp4P59240 1425 aa24.76■■□□□ 1.55
Trim58-201ENSMUST00000075084 Skint5A7XUY5 1461 aa24.75■■□□□ 1.55
Trim58-201ENSMUST00000075084 Arid4bA2CG63 1314 aaKnown RBP24.75■■□□□ 1.55
Trim58-201ENSMUST00000075084 Gm16486A0A1D5RMD1 1434 aa24.75■■□□□ 1.55
Trim58-201ENSMUST00000075084 Safb2Q80YR5 991 aaKnown RBP24.74■■□□□ 1.55
Trim58-201ENSMUST00000075084 Q7TT23 1179 aa24.73■■□□□ 1.55
Trim58-201ENSMUST00000075084 Zscan21Q07231 555 aa24.73■■□□□ 1.55
Trim58-201ENSMUST00000075084 Fam184bQ0KK56 942 aa24.72■■□□□ 1.55
Trim58-201ENSMUST00000075084 Sipa1l1Q8C0T5 1782 aa24.71■■□□□ 1.55
Trim58-201ENSMUST00000075084 DnmbpQ6TXD4 1580 aa24.71■■□□□ 1.55
Trim58-201ENSMUST00000075084 Ahdc1Q6PAL7 1594 aaKnown RBP24.71■■□□□ 1.55
Trim58-201ENSMUST00000075084 P3h3Q8CG70 732 aa24.7■■□□□ 1.54
Trim58-201ENSMUST00000075084 Uggt1Q6P5E4 1551 aa24.69■■□□□ 1.54
Trim58-201ENSMUST00000075084 Puf60Q3UEB3 564 aaKnown RBP24.69■■□□□ 1.54
Trim58-201ENSMUST00000075084 Plxnc1Q9QZC2 1574 aa24.68■■□□□ 1.54
Trim58-201ENSMUST00000075084 Tex14Q7M6U3 1450 aa24.68■■□□□ 1.54
Trim58-201ENSMUST00000075084 AU022751B1B0V2 589 aa24.67■■□□□ 1.54
Trim58-201ENSMUST00000075084 Mroh1E0CZ22 1640 aa24.66■■□□□ 1.54
Trim58-201ENSMUST00000075084 Med14A2ABV5 1459 aaKnown RBP24.64■■□□□ 1.54
Trim58-201ENSMUST00000075084 Kdm5aQ3UXZ9 1690 aa24.64■■□□□ 1.53
Trim58-201ENSMUST00000075084 Ercc6l2Q9JIM3 1537 aa24.62■■□□□ 1.53
Trim58-201ENSMUST00000075084 Mak16Q8BGS0 296 aaKnown RBP24.61■■□□□ 1.53
Trim58-201ENSMUST00000075084 Alpk3Q924C5 1678 aa24.6■■□□□ 1.53
Trim58-201ENSMUST00000075084 Ppp2r1aQ76MZ3 589 aa24.6■■□□□ 1.53
Trim58-201ENSMUST00000075084 Myom1Q62234 1667 aaKnown RBP24.59■■□□□ 1.53
Trim58-201ENSMUST00000075084 Kif13aQ9EQW7 1749 aa24.58■■□□□ 1.53
Trim58-201ENSMUST00000075084 Lrrc7Q80TE7 1490 aa24.58■■□□□ 1.52
Trim58-201ENSMUST00000075084 Rab3gap2Q8BMG7 1366 aa24.58■■□□□ 1.52
Trim58-201ENSMUST00000075084 PtprmP28828 1452 aa24.57■■□□□ 1.52
Trim58-201ENSMUST00000075084 Prrc2bQ7TPM1 1486 aaKnown RBP24.57■■□□□ 1.52
Trim58-201ENSMUST00000075084 L3mbtl2P59178 703 aa24.57■■□□□ 1.52
Trim58-201ENSMUST00000075084 PalldQ9ET54 1408 aa24.57■■□□□ 1.52
Trim58-201ENSMUST00000075084 Itsn1Q9Z0R4 1714 aa24.57■■□□□ 1.52
Trim58-201ENSMUST00000075084 Ift172Q6VH22 1749 aa24.55■■□□□ 1.52
Trim58-201ENSMUST00000075084 Slc52a2Q9D8F3 450 aa24.54■■□□□ 1.52
Trim58-201ENSMUST00000075084 Naip7Q9JIB3 1402 aa24.54■■□□□ 1.52
Trim58-201ENSMUST00000075084 Stag3O70576 1240 aa24.53■■□□□ 1.52
Trim58-201ENSMUST00000075084 Zfp444Q3TDV8 331 aaKnown RBP24.53■■□□□ 1.52
Trim58-201ENSMUST00000075084 MlecQ6ZQI3 291 aaKnown RBP24.53■■□□□ 1.52
Trim58-201ENSMUST00000075084 Kif7B7ZNG0 1348 aa24.53■■□□□ 1.52
Trim58-201ENSMUST00000075084 Dip2bQ3UH60 1574 aa24.51■■□□□ 1.51
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms