RNA–Protein interactions for RNA: ENSMUST00000073691.3

Lima1-201, Transcript of LIM domain and actin-binding protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lima1, Length 4,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1-201ENSMUST00000073691 AU015836B2RUM3 263 aa13.78□□□□□ -0.2
Lima1-201ENSMUST00000073691 G3bp1P97855 465 aaKnown RBP13.78□□□□□ -0.2
Lima1-201ENSMUST00000073691 HnrnpuQ8VEK3 800 aaKnown RBP13.78□□□□□ -0.2
Lima1-201ENSMUST00000073691 Ncoa3O09000 1398 aa13.78□□□□□ -0.2
Lima1-201ENSMUST00000073691 Ccdc141E9Q8Q6 1531 aa13.77□□□□□ -0.2
Lima1-201ENSMUST00000073691 Rfx1P48377 963 aa13.77□□□□□ -0.21
Lima1-201ENSMUST00000073691 Mre11Q61216 706 aa13.77□□□□□ -0.21
Lima1-201ENSMUST00000073691 Rtn4Q99P72 1162 aaKnown RBP13.77□□□□□ -0.21
Lima1-201ENSMUST00000073691 BC005561E9Q5E2 1589 aa13.77□□□□□ -0.21
Lima1-201ENSMUST00000073691 Ccdc183A2AJB1 534 aa13.76□□□□□ -0.21
Lima1-201ENSMUST00000073691 Q3TQI7 289 aaKnown RBP13.76□□□□□ -0.21
Lima1-201ENSMUST00000073691 Liat1Q810M6 228 aa13.76□□□□□ -0.21
Lima1-201ENSMUST00000073691 Dnajc5bQ9CQ94 199 aa13.76□□□□□ -0.21
Lima1-201ENSMUST00000073691 Cc2d1aQ8K1A6 943 aa13.75□□□□□ -0.21
Lima1-201ENSMUST00000073691 Ylpm1Q9R0I7 1386 aaKnown RBP13.75□□□□□ -0.21
Lima1-201ENSMUST00000073691 Erich6bQ9D4S6 220 aa13.75□□□□□ -0.21
Lima1-201ENSMUST00000073691 SlkO54988 1233 aa13.74□□□□□ -0.21
Lima1-201ENSMUST00000073691 Magi1Q6RHR9 1471 aa13.74□□□□□ -0.21
Lima1-201ENSMUST00000073691 Tspyl2Q7TQI8 677 aa13.73□□□□□ -0.21
Lima1-201ENSMUST00000073691 Samd9lQ69Z37 1561 aa13.73□□□□□ -0.21
Lima1-201ENSMUST00000073691 Rfx7F8VPJ6 1459 aa13.72□□□□□ -0.21
Lima1-201ENSMUST00000073691 Q9D9H8 365 aa13.72□□□□□ -0.21
Lima1-201ENSMUST00000073691 Neo1P97798 1493 aa13.71□□□□□ -0.21
Lima1-201ENSMUST00000073691 Fgd6Q69ZL1 1399 aa13.7□□□□□ -0.22
Lima1-201ENSMUST00000073691 Pik3c2gO70167 1506 aa13.7□□□□□ -0.22
Lima1-201ENSMUST00000073691 Casc1Q6TDU8 730 aa13.69□□□□□ -0.22
Lima1-201ENSMUST00000073691 Rbm25B2RY56 838 aaKnown RBP13.69□□□□□ -0.22
Lima1-201ENSMUST00000073691 Atp2b2Q9R0K7 1198 aa13.69□□□□□ -0.22
Lima1-201ENSMUST00000073691 Atxn3Q9CVD2 355 aa13.69□□□□□ -0.22
Lima1-201ENSMUST00000073691 Stk31Q99MW1 1018 aa13.68□□□□□ -0.22
Lima1-201ENSMUST00000073691 PxdnQ3UQ28 1475 aa13.68□□□□□ -0.22
Lima1-201ENSMUST00000073691 Triml2E9PW10 424 aa13.67□□□□□ -0.22
Lima1-201ENSMUST00000073691 Tnpo1Q8BFY9 898 aaKnown RBP13.67□□□□□ -0.22
Lima1-201ENSMUST00000073691 Gm14025A2AP89 1413 aa13.67□□□□□ -0.22
Lima1-201ENSMUST00000073691 Polr3aB2RXC6 1390 aa13.66□□□□□ -0.22
Lima1-201ENSMUST00000073691 Gsto1O09131 240 aa13.66□□□□□ -0.22
Lima1-201ENSMUST00000073691 Chmp4cQ9D7F7 232 aa13.66□□□□□ -0.22
Lima1-201ENSMUST00000073691 Pcmtd1P59913 357 aa13.66□□□□□ -0.22
Lima1-201ENSMUST00000073691 Dusp27Q148W8 1138 aa13.66□□□□□ -0.22
Lima1-201ENSMUST00000073691 Stk11ipQ3TAA7 1072 aa13.66□□□□□ -0.22
Lima1-201ENSMUST00000073691 MccE9PWI3 1003 aa13.66□□□□□ -0.22
Lima1-201ENSMUST00000073691 Cabp4Q8VHC5 271 aa13.66□□□□□ -0.22
Lima1-201ENSMUST00000073691 Usp16Q99LG0 825 aa13.66□□□□□ -0.22
Lima1-201ENSMUST00000073691 Asxl1P59598 1514 aa13.65□□□□□ -0.22
Lima1-201ENSMUST00000073691 Pla2r1Q62028 1487 aa13.65□□□□□ -0.22
Lima1-201ENSMUST00000073691 Rabep1O35551 862 aa13.65□□□□□ -0.22
Lima1-201ENSMUST00000073691 Eif4g2Q62448 906 aaKnown RBP13.65□□□□□ -0.22
Lima1-201ENSMUST00000073691 Plcd4Q8K3R3 807 aa13.65□□□□□ -0.22
Lima1-201ENSMUST00000073691 Ppp2r3aB2RXC8 1150 aa13.62□□□□□ -0.23
Lima1-201ENSMUST00000073691 Kdm5bQ80Y84 1544 aa13.62□□□□□ -0.23
Lima1-201ENSMUST00000073691 Adgrb2Q8CGM1 1561 aa13.62□□□□□ -0.23
Lima1-201ENSMUST00000073691 Zfp777B9EKF4 885 aa13.62□□□□□ -0.23
Lima1-201ENSMUST00000073691 Atl3Q91YH5 541 aa13.62□□□□□ -0.23
Lima1-201ENSMUST00000073691 Swt1Q9DBQ9 907 aa13.62□□□□□ -0.23
Lima1-201ENSMUST00000073691 Camsap2Q8C1B1 1461 aa13.61□□□□□ -0.23
Lima1-201ENSMUST00000073691 Rsph3aQ3UFY4 516 aa13.61□□□□□ -0.23
Lima1-201ENSMUST00000073691 WizO88286 1684 aaKnown RBP13.61□□□□□ -0.23
Lima1-201ENSMUST00000073691 Ric3Q8BPM6 367 aa13.61□□□□□ -0.23
Lima1-201ENSMUST00000073691 Erich3F6QRE9 1637 aa13.61□□□□□ -0.23
Lima1-201ENSMUST00000073691 Brpf1B2RRD7 1212 aa13.6□□□□□ -0.23
Lima1-201ENSMUST00000073691 Kank1E9Q238 1360 aa13.6□□□□□ -0.23
Lima1-201ENSMUST00000073691 Nek4Q9Z1J2 792 aa13.6□□□□□ -0.23
Lima1-201ENSMUST00000073691 Cald1E9QA15 768 aaKnown RBP13.6□□□□□ -0.23
Lima1-201ENSMUST00000073691 Arhgef40Q3UPH7 1517 aa13.59□□□□□ -0.23
Lima1-201ENSMUST00000073691 Pabpn1Q8CCS6 302 aaKnown RBP13.59□□□□□ -0.23
Lima1-201ENSMUST00000073691 Pes1Q9EQ61 584 aaKnown RBP13.59□□□□□ -0.23
Lima1-201ENSMUST00000073691 Mlh3A0A1Y7VMP7 1443 aa13.59□□□□□ -0.23
Lima1-201ENSMUST00000073691 Disp1Q3TDN0 1521 aa13.59□□□□□ -0.23
Lima1-201ENSMUST00000073691 Cavin4A2AMM0 362 aa13.59□□□□□ -0.23
Lima1-201ENSMUST00000073691 Slc4a10Q5DTL9 1118 aa13.58□□□□□ -0.24
Lima1-201ENSMUST00000073691 Ttc21bQ0HA38 1315 aa13.58□□□□□ -0.24
Lima1-201ENSMUST00000073691 Wdr7Q920I9 1489 aa13.58□□□□□ -0.24
Lima1-201ENSMUST00000073691 CgnP59242 1191 aa13.58□□□□□ -0.24
Lima1-201ENSMUST00000073691 Rassf8Q8CJ96 419 aa13.58□□□□□ -0.24
Lima1-201ENSMUST00000073691 Mug2P28666 1451 aa13.58□□□□□ -0.24
Lima1-201ENSMUST00000073691 Unc13aQ4KUS2 1712 aa13.57□□□□□ -0.24
Lima1-201ENSMUST00000073691 Cog6Q8R3I3 657 aa13.57□□□□□ -0.24
Lima1-201ENSMUST00000073691 Sh3bp5Q9Z131 463 aa13.57□□□□□ -0.24
Lima1-201ENSMUST00000073691 Atp7aQ64430 1491 aa13.57□□□□□ -0.24
Lima1-201ENSMUST00000073691 Trappc8E9PWG2 1437 aa13.57□□□□□ -0.24
Lima1-201ENSMUST00000073691 SkilQ60665 675 aa13.57□□□□□ -0.24
Lima1-201ENSMUST00000073691 Q9D2X8 372 aa13.57□□□□□ -0.24
Lima1-201ENSMUST00000073691 Zranb1Q7M760 708 aa13.56□□□□□ -0.24
Lima1-201ENSMUST00000073691 Smc5Q8CG46 1101 aaKnown RBP13.56□□□□□ -0.24
Lima1-201ENSMUST00000073691 Gnai1B2RSH2 354 aa13.56□□□□□ -0.24
Lima1-201ENSMUST00000073691 Gnai3Q9DC51 354 aa13.56□□□□□ -0.24
Lima1-201ENSMUST00000073691 Gm21190A0A0G2JGJ6 266 aa13.56□□□□□ -0.24
Lima1-201ENSMUST00000073691 Cgnl1Q6AW69 1298 aa13.55□□□□□ -0.24
Lima1-201ENSMUST00000073691 Taok2Q6ZQ29 1240 aa13.55□□□□□ -0.24
Lima1-201ENSMUST00000073691 MecomP14404 1042 aa13.54□□□□□ -0.24
Lima1-201ENSMUST00000073691 Fam135aQ6NS59 1506 aa13.54□□□□□ -0.24
Lima1-201ENSMUST00000073691 Egfem1Q8C088 590 aa13.54□□□□□ -0.24
Lima1-201ENSMUST00000073691 Phactr2B1AVP0 632 aa13.54□□□□□ -0.24
Lima1-201ENSMUST00000073691 Casq1O09165 405 aa13.54□□□□□ -0.24
Lima1-201ENSMUST00000073691 Afap1Q80YS6 731 aa13.54□□□□□ -0.24
Lima1-201ENSMUST00000073691 Cdk19Q8BWD8 501 aa13.54□□□□□ -0.24
Lima1-201ENSMUST00000073691 Ap3b2Q9JME5 1082 aa13.54□□□□□ -0.24
Lima1-201ENSMUST00000073691 MpripP97434 1024 aa13.53□□□□□ -0.24
Lima1-201ENSMUST00000073691 Maco1Q7TQE6 664 aaKnown RBP13.53□□□□□ -0.24
Lima1-201ENSMUST00000073691 Kif18aQ91WD7 886 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms