RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Cfap99A0A140LIX9 648 aa13.54□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Gprasp1Q5U4C1 1347 aa13.54□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Ccp110Q7TSH4 1004 aa13.54□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Dcaf11Q91VU6 549 aa13.53□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Ccdc83Q9D4V3 305 aa13.53□□□□□ -0.24
Rtn3-202ENSMUST00000065304 PdcQ9QW08 244 aa13.53□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Kif16bB1AVY7 1312 aa13.52□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Dhx16G3X8X0 1044 aaKnown RBP13.52□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Lrrc45Q8CIM1 670 aa13.52□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Stard8Q8K031 1019 aa13.52□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Rbm25B2RY56 838 aaKnown RBP13.52□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Arhgef18Q6P9R4 1021 aa13.51□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Rab11fip3Q8CHD8 1047 aa13.51□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Phldb2Q8K1N2 1249 aa13.51□□□□□ -0.25
Rtn3-202ENSMUST00000065304 StambpQ9CQ26 424 aa13.51□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Map4P27546 1125 aaKnown RBP13.51□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Znf526Q8BI66 675 aa13.51□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Nop14Q8R3N1 860 aaKnown RBP13.51□□□□□ -0.25
Rtn3-202ENSMUST00000065304 CrcpO35427 148 aa13.5□□□□□ -0.25
Rtn3-202ENSMUST00000065304 TxlnaQ6PAM1 554 aaKnown RBP13.5□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Cep89Q9CZX2 791 aa13.5□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Hnrnpul1Q8VDM6 859 aaKnown RBP13.49□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Rfx1P48377 963 aa13.49□□□□□ -0.25
Rtn3-202ENSMUST00000065304 ClasrpQ8CFC7 668 aa13.49□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Stk31Q99MW1 1018 aa13.49□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Map3k7clP58500 142 aa13.49□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Tceal9Q9DD24 104 aa13.49□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Ddx23D3Z0M9 819 aaKnown RBP13.48□□□□□ -0.25
Rtn3-202ENSMUST00000065304 ItpripQ3TNL8 555 aa13.48□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Sept11Q8C1B7 431 aaKnown RBP13.48□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Ccdc191J3QQ27 883 aa13.47□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Pkd2O35245 966 aa13.47□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Ccdc96Q9CR92 584 aa13.47□□□□□ -0.25
Rtn3-202ENSMUST00000065304 NefhP19246 1090 aa13.47□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Rock2P70336 1388 aa13.47□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Ercc6lQ8BHK9 1240 aa13.47□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Fyco1Q8VDC1 1437 aa13.46□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Erc2Q6PH08 957 aa13.46□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Pds5bQ4VA53 1446 aaKnown RBP13.46□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Hspa5P20029 655 aaKnown RBP13.46□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Fez1Q8K0X8 392 aa13.46□□□□□ -0.25
Rtn3-202ENSMUST00000065304 Ifit1bl1D3Z6F0 470 aa13.46□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Atl3Q91YH5 541 aa13.46□□□□□ -0.26
Rtn3-202ENSMUST00000065304 SelenooQ9DBC0 667 aa13.46□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Stk26Q99JT2 416 aa13.45□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Phactr2B1AVP0 632 aa13.45□□□□□ -0.26
Rtn3-202ENSMUST00000065304 CrbnQ8C7D2 445 aa13.45□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Pibf1E9Q6K3 756 aa13.45□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Rsph4aQ8BYM7 716 aa13.45□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Mipol1Q9D9F8 279 aa13.45□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Sept6Q9R1T4 434 aa13.45□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Psma5Q9Z2U1 241 aaKnown RBP13.45□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Arhgap27A2AB59 869 aa13.44□□□□□ -0.26
Rtn3-202ENSMUST00000065304 CenphQ9QYM8 241 aa13.44□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Me1P06801 572 aa13.44□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Bag1Q60739 355 aa13.44□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Slc13a4Q8BZ82 625 aa13.44□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Ccdc60Q8C4J0 545 aa13.44□□□□□ -0.26
Rtn3-202ENSMUST00000065304 G3bp1P97855 465 aaKnown RBP13.43□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Cetn4Q8K4K1 168 aa13.43□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Eif3aP23116 1344 aaKnown RBP13.43□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Srcin1Q9QWI6 1250 aa13.43□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Ccdc181Q80ZU5 509 aa13.42□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Ddx46Q569Z5 1032 aaKnown RBP13.42□□□□□ -0.26
Rtn3-202ENSMUST00000065304 1700010I14RikQ7TPG0 532 aa13.42□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Mad1l1Q9WTX8 717 aaKnown RBP13.42□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Stim1P70302 685 aa13.41□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Ints3Q7TPD0 1041 aaKnown RBP13.41□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Trim30cD3YVI9 513 aa13.41□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Tango6Q8C3S2 1079 aa13.41□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Gtf2a1Q99PM3 378 aa13.41□□□□□ -0.26
Rtn3-202ENSMUST00000065304 NacadQ5SWP3 1504 aa13.4□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Hdgfl1Q2VPR5 283 aa13.4□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Rbm28Q8CGC6 750 aaKnown RBP13.4□□□□□ -0.26
Rtn3-202ENSMUST00000065304 IncenpQ9WU62 880 aa13.4□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Trap1aP19473 224 aa13.4□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Ppm1fQ8CGA0 452 aa13.4□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Ccdc102aQ3TMW1 549 aa13.4□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Tsen2Q6P7W5 460 aa13.4□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Rnf214Q8BFU3 668 aaKnown RBP13.4□□□□□ -0.26
Rtn3-202ENSMUST00000065304 Tubb6Q922F4 447 aa13.39□□□□□ -0.27
Rtn3-202ENSMUST00000065304 CenpqQ9CPQ5 267 aa13.39□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Phf14Q9D4H9 881 aa13.39□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Pafah1b1P63005 410 aaKnown RBP13.39□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Psme1P97371 249 aa13.39□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Ciz1Q8VEH2 845 aa13.39□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Eif2s2Q99L45 331 aaKnown RBP13.39□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Cetn2Q9R1K9 172 aa13.39□□□□□ -0.27
Rtn3-202ENSMUST00000065304 PogkQ80TC5 607 aa13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Rnf187Q8BFX1 236 aa13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 MicalclQ9D5U9 680 aa13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Homer1Q9Z2Y3 366 aa13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 L1td1Q587J6 782 aaKnown RBP13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Acbd3Q8BMP6 525 aa13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Q9D2X8 372 aa13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Tspyl3Q3UYP3 334 aa13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Trim58Q5NCC9 485 aa13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 4921530L21RikQ9CQ47 274 aa13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Map2k1P31938 393 aa13.38□□□□□ -0.27
Rtn3-202ENSMUST00000065304 Gtf2f1Q3THK3 508 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 1155.7 ms