RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Zfyve16Q80U44 1528 aa22.8■■□□□ 1.24
Ddx28-201ENSMUST00000058579 Ak9G3UYQ4 1894 aa22.79■■□□□ 1.24
Ddx28-201ENSMUST00000058579 Srcin1Q9QWI6 1250 aa22.78■■□□□ 1.24
Ddx28-201ENSMUST00000058579 Nsd2Q8BVE8 1365 aa22.77■■□□□ 1.24
Ddx28-201ENSMUST00000058579 Slc4a1apE9PX68 744 aa22.77■■□□□ 1.24
Ddx28-201ENSMUST00000058579 Kif1bQ60575 1816 aaKnown RBP22.76■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Ppp2r1aQ76MZ3 589 aa22.76■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Abca9Q8K449 1623 aa22.75■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Kif16bB1AVY7 1312 aa22.75■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Gm16486A0A1D5RMD1 1434 aa22.75■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Ttc41Q692V3 1318 aa22.74■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Usp54Q8BL06 1588 aaKnown RBP22.74■■□□□ 1.23
Ddx28-201ENSMUST00000058579 ShprhQ7TPQ3 1674 aa22.73■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Erich6D3Z6S9 713 aa22.73■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Kdm2aP59997 1161 aa22.73■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Mbd3Q9Z2D8 285 aaKnown RBP22.73■■□□□ 1.23
Ddx28-201ENSMUST00000058579 CrbnQ8C7D2 445 aa22.73■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Fam184bQ0KK56 942 aa22.72■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Rab3gap2Q8BMG7 1366 aa22.71■■□□□ 1.23
Ddx28-201ENSMUST00000058579 Clasp1Q80TV8 1535 aaKnown RBP22.7■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Ttll13A4Q9F6 804 aa22.69■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Pola1P33609 1465 aa22.69■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Abcc6Q9R1S7 1498 aa22.69■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Abca17E9PX95 1733 aa22.69■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Atf7ipQ7TT18 1306 aa22.68■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Xrn1P97789 1719 aaKnown RBP22.68■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Lemd3Q9WU40 921 aa22.67■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Gm156Q58A37 223 aa22.66■■□□□ 1.22
Ddx28-201ENSMUST00000058579 AnkarA2RT91 1465 aa22.66■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Sall3Q62255 1320 aa22.66■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Rwdd1Q9CQK7 243 aa22.64■■□□□ 1.22
Ddx28-201ENSMUST00000058579 Uggt2E9Q4X2 1504 aa22.64■■□□□ 1.21
Ddx28-201ENSMUST00000058579 Ylpm1Q9R0I7 1386 aaKnown RBP22.63■■□□□ 1.21
Ddx28-201ENSMUST00000058579 Plekhh1Q80TI1 1356 aa22.62■■□□□ 1.21
Ddx28-201ENSMUST00000058579 Os9Q8K2C7 672 aa22.62■■□□□ 1.21
Ddx28-201ENSMUST00000058579 ChgaP26339 463 aaKnown RBP22.61■■□□□ 1.21
Ddx28-201ENSMUST00000058579 Gm20521D3Z5F7 333 aa22.61■■□□□ 1.21
Ddx28-201ENSMUST00000058579 Itsn2Q9Z0R6 1659 aa22.6■■□□□ 1.21
Ddx28-201ENSMUST00000058579 Kdm2bQ6P1G2 1309 aa22.6■■□□□ 1.21
Ddx28-201ENSMUST00000058579 Nos1Q9Z0J4 1429 aa22.59■■□□□ 1.21
Ddx28-201ENSMUST00000058579 Kif3bQ61771 747 aa22.59■■□□□ 1.21
Ddx28-201ENSMUST00000058579 Iqcf3Q9D498 203 aa22.58■■□□□ 1.21
Ddx28-201ENSMUST00000058579 B4galnt3Q6L8S8 986 aa22.57■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Kif7B7ZNG0 1348 aa22.57■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Myo5cE9Q1F5 1742 aa22.57■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Col17a1Q07563 1470 aa22.57■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Gtf2e1Q9D0D5 440 aa22.56■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Speer4f1Q9D5Q6 258 aa22.56■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Nlrp6Q91WS2 869 aa22.55■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Kdm5aQ3UXZ9 1690 aa22.53■■□□□ 1.2
Ddx28-201ENSMUST00000058579 EspnQ9ET47 871 aa22.53■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Cep152A2AUM9 1736 aaKnown RBP22.53■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Hsp90aa1P07901 733 aaKnown RBP22.52■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Stard8Q8K031 1019 aa22.52■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Dcaf11Q91VU6 549 aa22.52■■□□□ 1.2
Ddx28-201ENSMUST00000058579 OvosQ3UU35 1456 aa22.52■■□□□ 1.2
Ddx28-201ENSMUST00000058579 Ttc21bQ0HA38 1315 aa22.52■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Usp40Q8BWR4 1235 aa22.51■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Apbb1Q9QXJ1 710 aa22.51■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Usp19Q3UJD6 1360 aa22.51■■□□□ 1.19
Ddx28-201ENSMUST00000058579 ErbinQ80TH2 1402 aa22.51■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Ccdc30Q8BVF4 654 aa22.51■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Stk24Q99KH8 431 aa22.51■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Srpk2O54781 681 aaKnown RBP22.5■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Znf518aB2RRF6 1478 aaKnown RBP22.5■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Neurod2Q62414 383 aa22.5■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Fan1Q69ZT1 1020 aa22.49■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Dbr1Q923B1 550 aa22.49■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Adgrl3Q80TS3 1537 aa22.49■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Chmp5Q9D7S9 219 aa22.48■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Nkx1-2P42580 305 aa22.48■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Zmym3Q9JLM4 1370 aa22.48■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Ccdc9Q8VC31 543 aaKnown RBP22.47■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Fndc1E9Q043 1732 aa22.46■■□□□ 1.19
Ddx28-201ENSMUST00000058579 Myo3aQ8K3H5 1613 aa22.45■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Golga2Q921M4 999 aa22.45■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Nphp4P59240 1425 aa22.45■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Iqgap3F8VQ29 1632 aa22.45■■□□□ 1.18
Ddx28-201ENSMUST00000058579 CanxP35564 591 aaKnown RBP22.45■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Smc5Q8CG46 1101 aaKnown RBP22.44■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Abca6Q8K441 1624 aa22.44■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Ptch1Q61115 1434 aa22.43■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Tmem131lQ3U3D7 1597 aa22.43■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Rims1Q99NE5 1463 aa22.42■■□□□ 1.18
Ddx28-201ENSMUST00000058579 NudcO35685 332 aaKnown RBP22.41■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Atp10aO54827 1508 aa22.41■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Cdk5rap2Q8K389 1822 aa22.41■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Depdc5P61460 1591 aa22.41■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Gprasp1Q5U4C1 1347 aa22.41■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Abca8aQ8K442 1620 aa22.4■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Kiaa1107Q80TK0 1369 aa22.4■■□□□ 1.18
Ddx28-201ENSMUST00000058579 AatkQ80YE4 1365 aa22.4■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Ralbp1Q62172 648 aa22.4■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Mapk8ip3Q9ESN9 1337 aa22.39■■□□□ 1.18
Ddx28-201ENSMUST00000058579 Uspl1Q3ULM6 1089 aa22.39■■□□□ 1.17
Ddx28-201ENSMUST00000058579 AglF8VPN4 1532 aa22.39■■□□□ 1.17
Ddx28-201ENSMUST00000058579 Gli2Q0VGT2 1544 aa22.37■■□□□ 1.17
Ddx28-201ENSMUST00000058579 Topbp1Q6ZQF0 1515 aa22.37■■□□□ 1.17
Ddx28-201ENSMUST00000058579 Myom1Q62234 1667 aaKnown RBP22.37■■□□□ 1.17
Ddx28-201ENSMUST00000058579 Prdm10Q3UTQ7 1184 aa22.36■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms