RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Adamtsl3G3UXC7 1706 aa21.4■■□□□ 1.02
Trim3-201ENSMUST00000057525 Skint5A7XUY5 1461 aa21.39■■□□□ 1.02
Trim3-201ENSMUST00000057525 Gm20521D3Z5F7 333 aa21.39■■□□□ 1.01
Trim3-201ENSMUST00000057525 Cpsf1Q9EPU4 1441 aaKnown RBP21.38■■□□□ 1.01
Trim3-201ENSMUST00000057525 Abca8aQ8K442 1620 aa21.37■■□□□ 1.01
Trim3-201ENSMUST00000057525 Srpk2O54781 681 aaKnown RBP21.36■■□□□ 1.01
Trim3-201ENSMUST00000057525 Adgrb3Q80ZF8 1522 aa21.36■■□□□ 1.01
Trim3-201ENSMUST00000057525 AU022751B1B0V2 589 aa21.36■■□□□ 1.01
Trim3-201ENSMUST00000057525 Rsph4aQ8BYM7 716 aa21.36■■□□□ 1.01
Trim3-201ENSMUST00000057525 Adamts7Q68SA9 1657 aa21.35■■□□□ 1.01
Trim3-201ENSMUST00000057525 Prdm2A2A7B5 1709 aaKnown RBP21.35■■□□□ 1.01
Trim3-201ENSMUST00000057525 Ino80Q6ZPV2 1559 aa21.35■■□□□ 1.01
Trim3-201ENSMUST00000057525 Myom2Q14BI5 1463 aa21.34■■□□□ 1.01
Trim3-201ENSMUST00000057525 Ehbp1l1Q99MS7 1716 aa21.33■■□□□ 1.01
Trim3-201ENSMUST00000057525 Ercc6l2Q9JIM3 1537 aa21.33■■□□□ 1.01
Trim3-201ENSMUST00000057525 RalgapbQ8BQZ4 1484 aa21.32■■□□□ 1
Trim3-201ENSMUST00000057525 Efcab6Q6P1E8 1516 aa21.31■■□□□ 1
Trim3-201ENSMUST00000057525 Ahdc1Q6PAL7 1594 aaKnown RBP21.31■■□□□ 1
Trim3-201ENSMUST00000057525 Tecpr2Q3UH45 1423 aa21.3■■□□□ 1
Trim3-201ENSMUST00000057525 Arhgap23Q69ZH9 1483 aa21.3■■□□□ 1
Trim3-201ENSMUST00000057525 RictorQ6QI06 1708 aa21.29■■□□□ 1
Trim3-201ENSMUST00000057525 Prrc2bQ7TPM1 1486 aaKnown RBP21.29■■□□□ 1
Trim3-201ENSMUST00000057525 Myo3aQ8K3H5 1613 aa21.28■■□□□ 1
Trim3-201ENSMUST00000057525 Stk26Q99JT2 416 aa21.26■□□□□ 0.99
Trim3-201ENSMUST00000057525 Ncoa1P70365 1447 aa21.25■□□□□ 0.99
Trim3-201ENSMUST00000057525 Cwc22Q8C5N3 908 aaKnown RBP21.25■□□□□ 0.99
Trim3-201ENSMUST00000057525 Puf60Q3UEB3 564 aaKnown RBP21.25■□□□□ 0.99
Trim3-201ENSMUST00000057525 Txndc2Q6P902 515 aa21.25■□□□□ 0.99
Trim3-201ENSMUST00000057525 Shq1Q7TMX5 569 aa21.25■□□□□ 0.99
Trim3-201ENSMUST00000057525 Usp40Q8BWR4 1235 aa21.24■□□□□ 0.99
Trim3-201ENSMUST00000057525 Srcin1Q9QWI6 1250 aa21.24■□□□□ 0.99
Trim3-201ENSMUST00000057525 Rock2P70336 1388 aa21.24■□□□□ 0.99
Trim3-201ENSMUST00000057525 Mroh1E0CZ22 1640 aa21.23■□□□□ 0.99
Trim3-201ENSMUST00000057525 Kif13aQ9EQW7 1749 aa21.23■□□□□ 0.99
Trim3-201ENSMUST00000057525 Q9D9H8 365 aa21.23■□□□□ 0.99
Trim3-201ENSMUST00000057525 PtprmP28828 1452 aa21.23■□□□□ 0.99
Trim3-201ENSMUST00000057525 Asxl2Q8BZ32 1370 aa21.22■□□□□ 0.99
Trim3-201ENSMUST00000057525 Gm13695A2AK44 830 aa21.22■□□□□ 0.99
Trim3-201ENSMUST00000057525 Rims1Q99NE5 1463 aa21.22■□□□□ 0.99
Trim3-201ENSMUST00000057525 Naip7Q9JIB3 1402 aa21.2■□□□□ 0.98
Trim3-201ENSMUST00000057525 Psme1P97371 249 aa21.18■□□□□ 0.98
Trim3-201ENSMUST00000057525 Gtf2e1Q9D0D5 440 aa21.18■□□□□ 0.98
Trim3-201ENSMUST00000057525 Itsn1Q9Z0R4 1714 aa21.16■□□□□ 0.98
Trim3-201ENSMUST00000057525 Stag3O70576 1240 aa21.15■□□□□ 0.98
Trim3-201ENSMUST00000057525 Uggt1Q6P5E4 1551 aa21.15■□□□□ 0.98
Trim3-201ENSMUST00000057525 Cep152A2AUM9 1736 aaKnown RBP21.14■□□□□ 0.98
Trim3-201ENSMUST00000057525 Arid4bA2CG63 1314 aaKnown RBP21.14■□□□□ 0.98
Trim3-201ENSMUST00000057525 Med14A2ABV5 1459 aaKnown RBP21.14■□□□□ 0.98
Trim3-201ENSMUST00000057525 Cdk5rap2Q8K389 1822 aa21.13■□□□□ 0.97
Trim3-201ENSMUST00000057525 4930407I10RikD3Z5T8 1512 aa21.13■□□□□ 0.97
Trim3-201ENSMUST00000057525 IghaA0A0A6YXW6 389 aa21.1■□□□□ 0.97
Trim3-201ENSMUST00000057525 Alpk3Q924C5 1678 aa21.1■□□□□ 0.97
Trim3-201ENSMUST00000057525 Myom1Q62234 1667 aaKnown RBP21.09■□□□□ 0.97
Trim3-201ENSMUST00000057525 Plxnc1Q9QZC2 1574 aa21.08■□□□□ 0.97
Trim3-201ENSMUST00000057525 Prdm10Q3UTQ7 1184 aa21.08■□□□□ 0.96
Trim3-201ENSMUST00000057525 Cnga1P29974 684 aa21.07■□□□□ 0.96
Trim3-201ENSMUST00000057525 Utp14aQ640M1 767 aaKnown RBP21.07■□□□□ 0.96
Trim3-201ENSMUST00000057525 Slc52a2Q9D8F3 450 aa21.07■□□□□ 0.96
Trim3-201ENSMUST00000057525 Lrrc7Q80TE7 1490 aa21.07■□□□□ 0.96
Trim3-201ENSMUST00000057525 IqubQ8CDK3 788 aa21.07■□□□□ 0.96
Trim3-201ENSMUST00000057525 Plekhg5Q66T02 1073 aa21.05■□□□□ 0.96
Trim3-201ENSMUST00000057525 Dip2bQ3UH60 1574 aa21.04■□□□□ 0.96
Trim3-201ENSMUST00000057525 Slc4a1apE9PX68 744 aa21.03■□□□□ 0.96
Trim3-201ENSMUST00000057525 Nop58Q6DFW4 536 aaKnown RBP21.03■□□□□ 0.96
Trim3-201ENSMUST00000057525 Mink1Q9JM52 1308 aa21.02■□□□□ 0.96
Trim3-201ENSMUST00000057525 Zranb1Q7M760 708 aa21.02■□□□□ 0.96
Trim3-201ENSMUST00000057525 Pank3Q8R2W9 370 aa21.02■□□□□ 0.96
Trim3-201ENSMUST00000057525 Nphp4P59240 1425 aa21.02■□□□□ 0.96
Trim3-201ENSMUST00000057525 Chd2E9PZM4 1827 aaKnown RBP21.01■□□□□ 0.95
Trim3-201ENSMUST00000057525 Inpp5dQ9ES52 1191 aa21■□□□□ 0.95
Trim3-201ENSMUST00000057525 Wwc2Q6NXJ0 1187 aa20.99■□□□□ 0.95
Trim3-201ENSMUST00000057525 PalldQ9ET54 1408 aa20.99■□□□□ 0.95
Trim3-201ENSMUST00000057525 Arhgef28P97433 1693 aa20.98■□□□□ 0.95
Trim3-201ENSMUST00000057525 Stard8Q8K031 1019 aa20.98■□□□□ 0.95
Trim3-201ENSMUST00000057525 Cep170bQ80U49 1574 aa20.98■□□□□ 0.95
Trim3-201ENSMUST00000057525 Smg6P61406 1418 aaKnown RBP20.98■□□□□ 0.95
Trim3-201ENSMUST00000057525 PrxO55103 1391 aa20.97■□□□□ 0.95
Trim3-201ENSMUST00000057525 Sipa1l1Q8C0T5 1782 aa20.96■□□□□ 0.95
Trim3-201ENSMUST00000057525 GphnQ8BUV3 769 aaKnown RBP20.96■□□□□ 0.95
Trim3-201ENSMUST00000057525 Zc3h13E9Q784 1729 aaKnown RBP20.94■□□□□ 0.94
Trim3-201ENSMUST00000057525 Setd1aE9PYH6 1716 aa20.94■□□□□ 0.94
Trim3-201ENSMUST00000057525 HnrnpmQ9D0E1 729 aaKnown RBP20.94■□□□□ 0.94
Trim3-201ENSMUST00000057525 PplQ9R269 1755 aa20.93■□□□□ 0.94
Trim3-201ENSMUST00000057525 Atp2b2Q9R0K7 1198 aa20.93■□□□□ 0.94
Trim3-201ENSMUST00000057525 Pola1P33609 1465 aa20.92■□□□□ 0.94
Trim3-201ENSMUST00000057525 Exoc6Q8R313 802 aa20.91■□□□□ 0.94
Trim3-201ENSMUST00000057525 DnmbpQ6TXD4 1580 aa20.91■□□□□ 0.94
Trim3-201ENSMUST00000057525 Tmf1B9EKI3 1091 aa20.9■□□□□ 0.94
Trim3-201ENSMUST00000057525 Fam184bQ0KK56 942 aa20.88■□□□□ 0.93
Trim3-201ENSMUST00000057525 Exosc9Q9JHI7 438 aaKnown RBP20.88■□□□□ 0.93
Trim3-201ENSMUST00000057525 CenpjQ569L8 1344 aa20.88■□□□□ 0.93
Trim3-201ENSMUST00000057525 Mrs2Q5NCE8 434 aa20.88■□□□□ 0.93
Trim3-201ENSMUST00000057525 Topaz1E5FYH1 1653 aa20.87■□□□□ 0.93
Trim3-201ENSMUST00000057525 Znf316Q6PGE4 1016 aa20.87■□□□□ 0.93
Trim3-201ENSMUST00000057525 Itsn2Q9Z0R6 1659 aa20.86■□□□□ 0.93
Trim3-201ENSMUST00000057525 Zscan10Q3URR7 782 aa20.86■□□□□ 0.93
Trim3-201ENSMUST00000057525 Cdk19Q8BWD8 501 aa20.84■□□□□ 0.93
Trim3-201ENSMUST00000057525 Dip2aQ8BWT5 1523 aa20.84■□□□□ 0.93
Trim3-201ENSMUST00000057525 Eif2ak4Q9QZ05 1648 aa20.83■□□□□ 0.93
Trim3-201ENSMUST00000057525 Gemin5Q8BX17 1502 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms