RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Dbr1Q923B1 550 aa19.13■□□□□ 0.65
Msx3-201ENSMUST00000055353 Cfap74Q3UY96 1578 aa19.11■□□□□ 0.65
Msx3-201ENSMUST00000055353 Gm16486A0A1D5RMD1 1434 aa19.11■□□□□ 0.65
Msx3-201ENSMUST00000055353 Fam184bQ0KK56 942 aa19.11■□□□□ 0.65
Msx3-201ENSMUST00000055353 Prdm10Q3UTQ7 1184 aa19.11■□□□□ 0.65
Msx3-201ENSMUST00000055353 TnikP83510 1323 aa19.1■□□□□ 0.65
Msx3-201ENSMUST00000055353 Usp54Q8BL06 1588 aaKnown RBP19.1■□□□□ 0.65
Msx3-201ENSMUST00000055353 Abcc3B2RX12 1523 aa19.09■□□□□ 0.65
Msx3-201ENSMUST00000055353 Os9Q8K2C7 672 aa19.09■□□□□ 0.65
Msx3-201ENSMUST00000055353 Prdm16A2A935 1275 aa19.08■□□□□ 0.65
Msx3-201ENSMUST00000055353 Neurl4Q5NCX5 1563 aa19.08■□□□□ 0.65
Msx3-201ENSMUST00000055353 ShprhQ7TPQ3 1674 aa19.08■□□□□ 0.64
Msx3-201ENSMUST00000055353 Neurod2Q62414 383 aa19.08■□□□□ 0.64
Msx3-201ENSMUST00000055353 Iqcf3Q9D498 203 aa19.08■□□□□ 0.64
Msx3-201ENSMUST00000055353 Znf608Q56A10 1511 aa19.07■□□□□ 0.64
Msx3-201ENSMUST00000055353 Rab3gap2Q8BMG7 1366 aa19.07■□□□□ 0.64
Msx3-201ENSMUST00000055353 NhsB1AV60 1647 aa19.06■□□□□ 0.64
Msx3-201ENSMUST00000055353 Sbno1Q689Z5 1390 aa19.06■□□□□ 0.64
Msx3-201ENSMUST00000055353 Hecw1Q8K4P8 1604 aa19.06■□□□□ 0.64
Msx3-201ENSMUST00000055353 Atp10dQ8K2X1 1416 aa19.05■□□□□ 0.64
Msx3-201ENSMUST00000055353 Abcc6Q9R1S7 1498 aa19.05■□□□□ 0.64
Msx3-201ENSMUST00000055353 Kif1bQ60575 1816 aaKnown RBP19.05■□□□□ 0.64
Msx3-201ENSMUST00000055353 Speer4f1Q9D5Q6 258 aa19.04■□□□□ 0.64
Msx3-201ENSMUST00000055353 Kdm2bQ6P1G2 1309 aa19.04■□□□□ 0.64
Msx3-201ENSMUST00000055353 Gm20521D3Z5F7 333 aa19.03■□□□□ 0.64
Msx3-201ENSMUST00000055353 Stk24Q99KH8 431 aa19.03■□□□□ 0.64
Msx3-201ENSMUST00000055353 Rwdd1Q9CQK7 243 aa19.03■□□□□ 0.64
Msx3-201ENSMUST00000055353 Kif7B7ZNG0 1348 aa19.03■□□□□ 0.64
Msx3-201ENSMUST00000055353 Arid4bA2CG63 1314 aaKnown RBP19.03■□□□□ 0.64
Msx3-201ENSMUST00000055353 Kif3bQ61771 747 aa19.01■□□□□ 0.63
Msx3-201ENSMUST00000055353 Nsd2Q8BVE8 1365 aa19.01■□□□□ 0.63
Msx3-201ENSMUST00000055353 Dcaf11Q91VU6 549 aa19.01■□□□□ 0.63
Msx3-201ENSMUST00000055353 Kidins220E9Q9B7 1793 aa19.01■□□□□ 0.63
Msx3-201ENSMUST00000055353 TimelessQ9R1X4 1197 aa19■□□□□ 0.63
Msx3-201ENSMUST00000055353 Fan1Q69ZT1 1020 aa19■□□□□ 0.63
Msx3-201ENSMUST00000055353 Gas2l2Q5SSG4 860 aa18.99■□□□□ 0.63
Msx3-201ENSMUST00000055353 Ttc41Q692V3 1318 aa18.99■□□□□ 0.63
Msx3-201ENSMUST00000055353 Pola1P33609 1465 aa18.99■□□□□ 0.63
Msx3-201ENSMUST00000055353 Nlrp6Q91WS2 869 aa18.99■□□□□ 0.63
Msx3-201ENSMUST00000055353 Xrn1P97789 1719 aaKnown RBP18.99■□□□□ 0.63
Msx3-201ENSMUST00000055353 Abca8bQ8K440 1620 aa18.98■□□□□ 0.63
Msx3-201ENSMUST00000055353 Cnga1P29974 684 aa18.98■□□□□ 0.63
Msx3-201ENSMUST00000055353 Nkx1-2P42580 305 aa18.98■□□□□ 0.63
Msx3-201ENSMUST00000055353 Usp19Q3UJD6 1360 aa18.98■□□□□ 0.63
Msx3-201ENSMUST00000055353 Plekhh1Q80TI1 1356 aa18.98■□□□□ 0.63
Msx3-201ENSMUST00000055353 Abcc1O35379 1528 aa18.98■□□□□ 0.63
Msx3-201ENSMUST00000055353 Clasp1Q80TV8 1535 aaKnown RBP18.97■□□□□ 0.63
Msx3-201ENSMUST00000055353 Znf316Q6PGE4 1016 aa18.97■□□□□ 0.63
Msx3-201ENSMUST00000055353 Ccdc30Q8BVF4 654 aa18.97■□□□□ 0.63
Msx3-201ENSMUST00000055353 Chd1P40201 1711 aa18.97■□□□□ 0.63
Msx3-201ENSMUST00000055353 Usp40Q8BWR4 1235 aa18.97■□□□□ 0.63
Msx3-201ENSMUST00000055353 Gtf2e1Q9D0D5 440 aa18.96■□□□□ 0.63
Msx3-201ENSMUST00000055353 Col17a1Q07563 1470 aa18.96■□□□□ 0.63
Msx3-201ENSMUST00000055353 CanxP35564 591 aaKnown RBP18.96■□□□□ 0.63
Msx3-201ENSMUST00000055353 Chmp5Q9D7S9 219 aa18.96■□□□□ 0.63
Msx3-201ENSMUST00000055353 Atf7ipQ7TT18 1306 aa18.95■□□□□ 0.62
Msx3-201ENSMUST00000055353 Hsp90aa1P07901 733 aaKnown RBP18.95■□□□□ 0.62
Msx3-201ENSMUST00000055353 Tspyl2Q7TQI8 677 aa18.95■□□□□ 0.62
Msx3-201ENSMUST00000055353 Mbd3Q9Z2D8 285 aaKnown RBP18.95■□□□□ 0.62
Msx3-201ENSMUST00000055353 Abca17E9PX95 1733 aa18.95■□□□□ 0.62
Msx3-201ENSMUST00000055353 Kiaa1210E9Q0C6 1637 aa18.93■□□□□ 0.62
Msx3-201ENSMUST00000055353 Uggt2E9Q4X2 1504 aa18.93■□□□□ 0.62
Msx3-201ENSMUST00000055353 EspnQ9ET47 871 aa18.93■□□□□ 0.62
Msx3-201ENSMUST00000055353 Srpk2O54781 681 aaKnown RBP18.92■□□□□ 0.62
Msx3-201ENSMUST00000055353 Ttc21bQ0HA38 1315 aa18.92■□□□□ 0.62
Msx3-201ENSMUST00000055353 Ylpm1Q9R0I7 1386 aaKnown RBP18.92■□□□□ 0.62
Msx3-201ENSMUST00000055353 Sart3Q9JLI8 962 aaKnown RBP18.91■□□□□ 0.62
Msx3-201ENSMUST00000055353 Myo5cE9Q1F5 1742 aa18.9■□□□□ 0.62
Msx3-201ENSMUST00000055353 Kiaa1107Q80TK0 1369 aa18.9■□□□□ 0.62
Msx3-201ENSMUST00000055353 Itsn2Q9Z0R6 1659 aa18.9■□□□□ 0.62
Msx3-201ENSMUST00000055353 Golga2Q921M4 999 aa18.9■□□□□ 0.62
Msx3-201ENSMUST00000055353 Myo3aQ8K3H5 1613 aa18.9■□□□□ 0.62
Msx3-201ENSMUST00000055353 Arid3cA6PWV5 409 aa18.89■□□□□ 0.61
Msx3-201ENSMUST00000055353 Smc5Q8CG46 1101 aaKnown RBP18.89■□□□□ 0.61
Msx3-201ENSMUST00000055353 Kdm5aQ3UXZ9 1690 aa18.88■□□□□ 0.61
Msx3-201ENSMUST00000055353 ErbinQ80TH2 1402 aa18.88■□□□□ 0.61
Msx3-201ENSMUST00000055353 NudcO35685 332 aaKnown RBP18.88■□□□□ 0.61
Msx3-201ENSMUST00000055353 Scaf1Q5U4C3 1256 aaKnown RBP18.88■□□□□ 0.61
Msx3-201ENSMUST00000055353 DaxxO35613 739 aa18.87■□□□□ 0.61
Msx3-201ENSMUST00000055353 Pank1Q8K4K6 548 aa18.86■□□□□ 0.61
Msx3-201ENSMUST00000055353 Atxn3Q9CVD2 355 aa18.86■□□□□ 0.61
Msx3-201ENSMUST00000055353 AnkarA2RT91 1465 aa18.86■□□□□ 0.61
Msx3-201ENSMUST00000055353 Abca6Q8K441 1624 aa18.86■□□□□ 0.61
Msx3-201ENSMUST00000055353 Gtf3c3Q3TMP1 882 aa18.85■□□□□ 0.61
Msx3-201ENSMUST00000055353 4930567H17RikQ3V0K5 233 aa18.84■□□□□ 0.61
Msx3-201ENSMUST00000055353 AatkQ80YE4 1365 aa18.84■□□□□ 0.61
Msx3-201ENSMUST00000055353 Uspl1Q3ULM6 1089 aa18.83■□□□□ 0.61
Msx3-201ENSMUST00000055353 P2rx7Q9Z1M0 595 aa18.83■□□□□ 0.61
Msx3-201ENSMUST00000055353 Fndc1E9Q043 1732 aa18.83■□□□□ 0.6
Msx3-201ENSMUST00000055353 Nos1Q9Z0J4 1429 aa18.82■□□□□ 0.6
Msx3-201ENSMUST00000055353 Dnai1Q8C0M8 701 aa18.82■□□□□ 0.6
Msx3-201ENSMUST00000055353 Iqgap3F8VQ29 1632 aa18.81■□□□□ 0.6
Msx3-201ENSMUST00000055353 Trim30dE9PWL0 497 aa18.81■□□□□ 0.6
Msx3-201ENSMUST00000055353 Puf60Q3UEB3 564 aaKnown RBP18.81■□□□□ 0.6
Msx3-201ENSMUST00000055353 Myom1Q62234 1667 aaKnown RBP18.81■□□□□ 0.6
Msx3-201ENSMUST00000055353 Cdk5rap2Q8K389 1822 aa18.81■□□□□ 0.6
Msx3-201ENSMUST00000055353 Cep152A2AUM9 1736 aaKnown RBP18.8■□□□□ 0.6
Msx3-201ENSMUST00000055353 Nphp4P59240 1425 aa18.8■□□□□ 0.6
Msx3-201ENSMUST00000055353 Eif2s2Q99L45 331 aaKnown RBP18.79■□□□□ 0.6
Msx3-201ENSMUST00000055353 Armcx1Q9CX83 456 aa18.79■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 115.9 ms