RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Eva1cP58659 440 aa21.54■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Q8C5K5 320 aa21.53■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 CrcpO35427 148 aa21.51■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Zpr1Q62384 459 aa21.51■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Odf2A3KGV1 830 aaKnown RBP21.51■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Ccp110Q7TSH4 1004 aa21.51■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Sh3bgrQ9WUZ7 214 aa21.51■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Nsd2Q8BVE8 1365 aa21.51■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Trim30aP15533 496 aa21.5■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Ric3Q8BPM6 367 aa21.5■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Rrp12Q6P5B0 1295 aaKnown RBP21.5■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 TatQ8QZR1 454 aa21.5■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Tpm1P58771 284 aa21.49■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 BcanQ61361 883 aa21.49■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 NexnQ7TPW1 607 aa21.48■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Casq1O09165 405 aa21.48■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 KinQ8K339 391 aa21.48■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Gnai1B2RSH2 354 aa21.48■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Rnf20Q5DTM8 973 aa21.48■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Gnai3Q9DC51 354 aa21.48■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Q9D9H8 365 aa21.47■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Cplx1P63040 134 aa21.47■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 SetQ9EQU5 289 aaKnown RBP21.47■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 PnisrA2AJT4 805 aaKnown RBP21.46■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Gabpb2P81069 414 aa21.46■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Cfdp1O88271 295 aaKnown RBP21.45■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Bcl2l13P59017 434 aa21.45■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Trim58Q5NCC9 485 aa21.45■■□□□ 1.03
Pcdhac2-201ENSMUST00000047479 Puf60Q3UEB3 564 aaKnown RBP21.45■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Gm10471E9Q1C7 252 aa21.45■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Atp2b2Q9R0K7 1198 aa21.45■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 PhaxQ9JJT9 385 aaKnown RBP21.45■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Ccdc43Q9CR29 222 aaKnown RBP21.44■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Becn1O88597 448 aa21.44■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Swt1Q9DBQ9 907 aa21.43■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Rfx1P48377 963 aa21.43■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Pde4cQ3UEI1 686 aa21.43■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 A0A1L1SQF0 893 aa21.42■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 FanciQ8K368 1330 aa21.42■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Phactr2B1AVP0 632 aa21.42■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Rec8Q8C5S7 591 aa21.42■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Sf3b2Q3UJB0 878 aaKnown RBP21.42■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Erc2Q6PH08 957 aa21.41■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Ipo7Q9EPL8 1038 aaKnown RBP21.41■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Rbm25B2RY56 838 aaKnown RBP21.4■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 UvssaQ9D479 717 aa21.4■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Glipr1l2Q9CQ35 332 aa21.4■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Gnl3lQ6PGG6 577 aaKnown RBP21.39■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Ddrgk1Q80WW9 315 aa21.39■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Sv2bQ8BG39 683 aa21.39■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Nectin2P32507 530 aa21.39■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Bicd2Q921C5 820 aa21.39■■□□□ 1.02
Pcdhac2-201ENSMUST00000047479 Smarca2Q6DIC0 1577 aa21.39■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Cttnbp2B9EJA2 1648 aa21.39■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Polr3gQ6NXY9 223 aa21.39■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Hmox1P14901 289 aa21.39■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Prdm16A2A935 1275 aa21.38■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Q9D2X8 372 aa21.38■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Utp3Q9JI13 469 aaKnown RBP21.38■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Nolc1E9Q5C9 702 aaKnown RBP21.38■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Zranb3Q6NZP1 1069 aa21.37■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Ccdc30Q8BVF4 654 aa21.37■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 AampJ3QN89 436 aa21.36■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Cux1P53564 1515 aa21.36■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Mphosph10Q810V0 681 aaKnown RBP21.36■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 FosbP13346 338 aa21.35■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Smc3Q9CW03 1217 aaKnown RBP21.35■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Evi5lH3BKQ3 813 aa21.35■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Smg7Q5RJH6 1138 aaKnown RBP21.35■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Arid4aF8VPQ2 1261 aaKnown RBP21.34■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Chmp4cQ9D7F7 232 aa21.34■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Drc7Q6V3W6 876 aa21.34■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Ftsj3Q9DBE9 838 aaKnown RBP21.34■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 VgfQ0VGU4 617 aa21.34■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Rpgrip1lQ8CG73 1264 aa21.34■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Rbm5Q91YE7 815 aaKnown RBP21.34■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Sytl4Q9R0Q1 673 aa21.34■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Nutm1Q8BHP2 1126 aa21.33■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Ak7Q9D2H2 614 aa21.33■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 Kif16bB1AVY7 1312 aa21.33■■□□□ 1.01
Pcdhac2-201ENSMUST00000047479 March6Q6ZQ89 909 aa21.33■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Paf1Q8K2T8 535 aa21.33■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Hook1Q8BIL5 728 aa21.32■■□□□ 1
Pcdhac2-201ENSMUST00000047479 4933402E13RikQ9D4D2 429 aa21.32■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Wdr78E9PYY5 807 aa21.31■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Bcl11aQ9QYE3 773 aa21.31■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Me1P06801 572 aa21.31■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Gprasp1Q5U4C1 1347 aa21.31■■□□□ 1
Pcdhac2-201ENSMUST00000047479 TefQ9JLC6 301 aa21.3■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Map3k5O35099 1380 aa21.3■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Arhgap5P97393 1501 aa21.29■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Ddx54Q8K4L0 874 aaKnown RBP21.29■■□□□ 1
Pcdhac2-201ENSMUST00000047479 HypkQ9CR41 129 aa21.29■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Prm3Q62100 101 aa21.29■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Map7d2A2AG50 781 aa21.29■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Pank1Q8K4K6 548 aa21.29■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Cnnm1Q0GA42 951 aa21.29■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Mre11Q61216 706 aa21.27■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Ush1cQ9ES64 910 aa21.27■■□□□ 1
Pcdhac2-201ENSMUST00000047479 Polr1aO35134 1717 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms