RNA–Protein interactions for RNA: ENSMUST00000034245.15

Usb1-201, Transcript of U6 snRNA phosphodiesterase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usb1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1-201ENSMUST00000034245 Card11Q8CIS0 1159 aa23.48■■□□□ 1.35
Usb1-201ENSMUST00000034245 RictorQ6QI06 1708 aa23.47■■□□□ 1.35
Usb1-201ENSMUST00000034245 Cdk13Q69ZA1 1511 aaKnown RBP23.47■■□□□ 1.35
Usb1-201ENSMUST00000034245 Ehbp1l1Q99MS7 1716 aa23.45■■□□□ 1.34
Usb1-201ENSMUST00000034245 Ahdc1Q6PAL7 1594 aaKnown RBP23.44■■□□□ 1.34
Usb1-201ENSMUST00000034245 RalgapbQ8BQZ4 1484 aa23.44■■□□□ 1.34
Usb1-201ENSMUST00000034245 Cwc22Q8C5N3 908 aaKnown RBP23.44■■□□□ 1.34
Usb1-201ENSMUST00000034245 Sin3aQ60520 1274 aaKnown RBP23.42■■□□□ 1.34
Usb1-201ENSMUST00000034245 Kdm2aP59997 1161 aa23.41■■□□□ 1.34
Usb1-201ENSMUST00000034245 Med14A2ABV5 1459 aaKnown RBP23.4■■□□□ 1.34
Usb1-201ENSMUST00000034245 Rims1Q99NE5 1463 aa23.4■■□□□ 1.34
Usb1-201ENSMUST00000034245 Os9Q8K2C7 672 aa23.4■■□□□ 1.34
Usb1-201ENSMUST00000034245 Mroh1E0CZ22 1640 aa23.39■■□□□ 1.34
Usb1-201ENSMUST00000034245 Prdm2A2A7B5 1709 aaKnown RBP23.39■■□□□ 1.34
Usb1-201ENSMUST00000034245 Srpk2O54781 681 aaKnown RBP23.38■■□□□ 1.33
Usb1-201ENSMUST00000034245 Gm20521D3Z5F7 333 aa23.37■■□□□ 1.33
Usb1-201ENSMUST00000034245 Prrc2bQ7TPM1 1486 aaKnown RBP23.34■■□□□ 1.33
Usb1-201ENSMUST00000034245 Cep152A2AUM9 1736 aaKnown RBP23.33■■□□□ 1.33
Usb1-201ENSMUST00000034245 AU022751B1B0V2 589 aa23.32■■□□□ 1.32
Usb1-201ENSMUST00000034245 Ncoa1P70365 1447 aa23.32■■□□□ 1.32
Usb1-201ENSMUST00000034245 Plxnc1Q9QZC2 1574 aa23.31■■□□□ 1.32
Usb1-201ENSMUST00000034245 Ercc6l2Q9JIM3 1537 aa23.3■■□□□ 1.32
Usb1-201ENSMUST00000034245 Rock2P70336 1388 aa23.3■■□□□ 1.32
Usb1-201ENSMUST00000034245 Naip7Q9JIB3 1402 aa23.3■■□□□ 1.32
Usb1-201ENSMUST00000034245 Slc52a2Q9D8F3 450 aa23.29■■□□□ 1.32
Usb1-201ENSMUST00000034245 Fan1Q69ZT1 1020 aa23.29■■□□□ 1.32
Usb1-201ENSMUST00000034245 Stard8Q8K031 1019 aa23.29■■□□□ 1.32
Usb1-201ENSMUST00000034245 MlecQ6ZQI3 291 aaKnown RBP23.28■■□□□ 1.32
Usb1-201ENSMUST00000034245 PtprmP28828 1452 aa23.28■■□□□ 1.32
Usb1-201ENSMUST00000034245 Myo3aQ8K3H5 1613 aa23.28■■□□□ 1.32
Usb1-201ENSMUST00000034245 Alpk3Q924C5 1678 aa23.27■■□□□ 1.32
Usb1-201ENSMUST00000034245 MyclP10166 368 aa23.27■■□□□ 1.32
Usb1-201ENSMUST00000034245 Itsn1Q9Z0R4 1714 aa23.25■■□□□ 1.31
Usb1-201ENSMUST00000034245 Kif13aQ9EQW7 1749 aa23.24■■□□□ 1.31
Usb1-201ENSMUST00000034245 Puf60Q3UEB3 564 aaKnown RBP23.24■■□□□ 1.31
Usb1-201ENSMUST00000034245 Srcin1Q9QWI6 1250 aa23.24■■□□□ 1.31
Usb1-201ENSMUST00000034245 Atp1b4Q99ME6 356 aa23.23■■□□□ 1.31
Usb1-201ENSMUST00000034245 Kdm5aQ3UXZ9 1690 aa23.22■■□□□ 1.31
Usb1-201ENSMUST00000034245 P3h3Q8CG70 732 aa23.22■■□□□ 1.31
Usb1-201ENSMUST00000034245 Dip2bQ3UH60 1574 aa23.21■■□□□ 1.31
Usb1-201ENSMUST00000034245 Usp40Q8BWR4 1235 aa23.2■■□□□ 1.3
Usb1-201ENSMUST00000034245 Txndc2Q6P902 515 aa23.19■■□□□ 1.3
Usb1-201ENSMUST00000034245 Gtf2e1Q9D0D5 440 aa23.19■■□□□ 1.3
Usb1-201ENSMUST00000034245 Plekhg5Q66T02 1073 aa23.19■■□□□ 1.3
Usb1-201ENSMUST00000034245 Bcl9Q9D219 1425 aa23.18■■□□□ 1.3
Usb1-201ENSMUST00000034245 Shq1Q7TMX5 569 aa23.17■■□□□ 1.3
Usb1-201ENSMUST00000034245 Myom1Q62234 1667 aaKnown RBP23.17■■□□□ 1.3
Usb1-201ENSMUST00000034245 Zbtb4Q5F293 982 aa23.17■■□□□ 1.3
Usb1-201ENSMUST00000034245 Nphp4P59240 1425 aa23.16■■□□□ 1.3
Usb1-201ENSMUST00000034245 Psme1P97371 249 aa23.16■■□□□ 1.3
Usb1-201ENSMUST00000034245 Mapk8ip2Q9ERE9 830 aa23.15■■□□□ 1.3
Usb1-201ENSMUST00000034245 4930407I10RikD3Z5T8 1512 aa23.15■■□□□ 1.3
Usb1-201ENSMUST00000034245 Gemin5Q8BX17 1502 aaKnown RBP23.15■■□□□ 1.3
Usb1-201ENSMUST00000034245 IqubQ8CDK3 788 aa23.14■■□□□ 1.3
Usb1-201ENSMUST00000034245 Chd2E9PZM4 1827 aaKnown RBP23.14■■□□□ 1.29
Usb1-201ENSMUST00000034245 Cdk5rap2Q8K389 1822 aa23.13■■□□□ 1.29
Usb1-201ENSMUST00000034245 Gm13695A2AK44 830 aa23.12■■□□□ 1.29
Usb1-201ENSMUST00000034245 GphnQ8BUV3 769 aaKnown RBP23.12■■□□□ 1.29
Usb1-201ENSMUST00000034245 Lrrc7Q80TE7 1490 aa23.12■■□□□ 1.29
Usb1-201ENSMUST00000034245 Zc3h13E9Q784 1729 aaKnown RBP23.11■■□□□ 1.29
Usb1-201ENSMUST00000034245 Setd1aE9PYH6 1716 aa23.11■■□□□ 1.29
Usb1-201ENSMUST00000034245 Q9D9H8 365 aa23.1■■□□□ 1.29
Usb1-201ENSMUST00000034245 PalldQ9ET54 1408 aa23.1■■□□□ 1.29
Usb1-201ENSMUST00000034245 Stag3O70576 1240 aa23.09■■□□□ 1.29
Usb1-201ENSMUST00000034245 Pola1P33609 1465 aa23.09■■□□□ 1.29
Usb1-201ENSMUST00000034245 DnmbpQ6TXD4 1580 aa23.09■■□□□ 1.29
Usb1-201ENSMUST00000034245 Slc24a1Q91WD8 1130 aa23.07■■□□□ 1.28
Usb1-201ENSMUST00000034245 PplQ9R269 1755 aa23.07■■□□□ 1.28
Usb1-201ENSMUST00000034245 Arhgef28P97433 1693 aa23.07■■□□□ 1.28
Usb1-201ENSMUST00000034245 Eif2ak4Q9QZ05 1648 aa23.07■■□□□ 1.28
Usb1-201ENSMUST00000034245 Stk26Q99JT2 416 aa23.04■■□□□ 1.28
Usb1-201ENSMUST00000034245 Arid4bA2CG63 1314 aaKnown RBP23.04■■□□□ 1.28
Usb1-201ENSMUST00000034245 Sipa1l1Q8C0T5 1782 aa23.02■■□□□ 1.28
Usb1-201ENSMUST00000034245 Dip2aQ8BWT5 1523 aa23.02■■□□□ 1.28
Usb1-201ENSMUST00000034245 Utp14aQ640M1 767 aaKnown RBP23■■□□□ 1.27
Usb1-201ENSMUST00000034245 MaddQ80U28 1577 aa22.99■■□□□ 1.27
Usb1-201ENSMUST00000034245 CenpjQ569L8 1344 aa22.98■■□□□ 1.27
Usb1-201ENSMUST00000034245 Itsn2Q9Z0R6 1659 aa22.97■■□□□ 1.27
Usb1-201ENSMUST00000034245 Plekhg1F6S200 1446 aa22.96■■□□□ 1.27
Usb1-201ENSMUST00000034245 Sbno1Q689Z5 1390 aa22.95■■□□□ 1.26
Usb1-201ENSMUST00000034245 Asxl2Q8BZ32 1370 aa22.95■■□□□ 1.26
Usb1-201ENSMUST00000034245 Slit3Q9WVB4 1523 aa22.95■■□□□ 1.26
Usb1-201ENSMUST00000034245 Lmtk3Q5XJV6 1424 aa22.94■■□□□ 1.26
Usb1-201ENSMUST00000034245 Topaz1E5FYH1 1653 aa22.94■■□□□ 1.26
Usb1-201ENSMUST00000034245 PzpQ61838 1495 aa22.94■■□□□ 1.26
Usb1-201ENSMUST00000034245 Smg6P61406 1418 aaKnown RBP22.93■■□□□ 1.26
Usb1-201ENSMUST00000034245 Tmf1B9EKI3 1091 aa22.92■■□□□ 1.26
Usb1-201ENSMUST00000034245 Ift172Q6VH22 1749 aa22.92■■□□□ 1.26
Usb1-201ENSMUST00000034245 IghaA0A0A6YXW6 389 aa22.91■■□□□ 1.26
Usb1-201ENSMUST00000034245 Pik3r4Q8VD65 1358 aa22.91■■□□□ 1.26
Usb1-201ENSMUST00000034245 PrxO55103 1391 aa22.9■■□□□ 1.26
Usb1-201ENSMUST00000034245 Gm16486A0A1D5RMD1 1434 aa22.89■■□□□ 1.26
Usb1-201ENSMUST00000034245 Pank3Q8R2W9 370 aa22.89■■□□□ 1.26
Usb1-201ENSMUST00000034245 Slc4a1apE9PX68 744 aa22.89■■□□□ 1.25
Usb1-201ENSMUST00000034245 InsrP15208 1372 aa22.88■■□□□ 1.25
Usb1-201ENSMUST00000034245 Cep170bQ80U49 1574 aa22.88■■□□□ 1.25
Usb1-201ENSMUST00000034245 Fam184bQ0KK56 942 aa22.86■■□□□ 1.25
Usb1-201ENSMUST00000034245 Atp2b2Q9R0K7 1198 aa22.86■■□□□ 1.25
Usb1-201ENSMUST00000034245 Mink1Q9JM52 1308 aa22.85■■□□□ 1.25
Usb1-201ENSMUST00000034245 Scaf11E9PZM7 1456 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms