RNA–Protein interactions for RNA: ENSMUST00000026607.14

Chm-201, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chm, Length 4,868 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-201ENSMUST00000026607 Kif16bB1AVY7 1312 aa10.13□□□□□ -0.79
Chm-201ENSMUST00000026607 Dbr1Q923B1 550 aa10.13□□□□□ -0.79
Chm-201ENSMUST00000026607 Ppip5k1A2ARP1 1436 aa10.12□□□□□ -0.79
Chm-201ENSMUST00000026607 Mast1Q9R1L5 1570 aa10.12□□□□□ -0.79
Chm-201ENSMUST00000026607 Rangap1P46061 589 aaKnown RBP10.11□□□□□ -0.79
Chm-201ENSMUST00000026607 CenpjQ569L8 1344 aa10.11□□□□□ -0.79
Chm-201ENSMUST00000026607 Rnf17Q99MV7 1640 aa10.11□□□□□ -0.79
Chm-201ENSMUST00000026607 Tarbp1E9Q368 1579 aa10.1□□□□□ -0.79
Chm-201ENSMUST00000026607 Edc4Q3UJB9 1406 aaKnown RBP10.1□□□□□ -0.79
Chm-201ENSMUST00000026607 Pak3Q61036 559 aa10.1□□□□□ -0.79
Chm-201ENSMUST00000026607 Prkrip1Q9CWV6 186 aaKnown RBP10.1□□□□□ -0.79
Chm-201ENSMUST00000026607 4933416C03RikQ3V063 378 aa10.09□□□□□ -0.79
Chm-201ENSMUST00000026607 U2af1Q9D883 239 aaKnown RBP10.09□□□□□ -0.79
Chm-201ENSMUST00000026607 Plppr3Q7TPB0 716 aa10.09□□□□□ -0.79
Chm-201ENSMUST00000026607 Abcc6Q9R1S7 1498 aa10.09□□□□□ -0.79
Chm-201ENSMUST00000026607 Znf608Q56A10 1511 aa10.09□□□□□ -0.79
Chm-201ENSMUST00000026607 OvosQ3UU35 1456 aa10.09□□□□□ -0.79
Chm-201ENSMUST00000026607 Gm32742A0A1B0GT42 1604 aa10.08□□□□□ -0.8
Chm-201ENSMUST00000026607 Kank1E9Q238 1360 aa10.08□□□□□ -0.8
Chm-201ENSMUST00000026607 Mapk8ip3Q9ESN9 1337 aa10.08□□□□□ -0.8
Chm-201ENSMUST00000026607 Ccdc30Q8BVF4 654 aa10.08□□□□□ -0.8
Chm-201ENSMUST00000026607 Ipo9Q91YE6 1041 aa10.08□□□□□ -0.8
Chm-201ENSMUST00000026607 Chmp5Q9D7S9 219 aa10.08□□□□□ -0.8
Chm-201ENSMUST00000026607 CanxP35564 591 aaKnown RBP10.07□□□□□ -0.8
Chm-201ENSMUST00000026607 Trim30dE9PWL0 497 aa10.07□□□□□ -0.8
Chm-201ENSMUST00000026607 Shq1Q7TMX5 569 aa10.07□□□□□ -0.8
Chm-201ENSMUST00000026607 GsdmaQ9EST1 446 aa10.07□□□□□ -0.8
Chm-201ENSMUST00000026607 Zmym4A2A791 1549 aaKnown RBP10.07□□□□□ -0.8
Chm-201ENSMUST00000026607 Usp54Q8BL06 1588 aaKnown RBP10.06□□□□□ -0.8
Chm-201ENSMUST00000026607 Ralbp1Q62172 648 aa10.06□□□□□ -0.8
Chm-201ENSMUST00000026607 Plekhh1Q80TI1 1356 aa10.06□□□□□ -0.8
Chm-201ENSMUST00000026607 EspnQ9ET47 871 aa10.06□□□□□ -0.8
Chm-201ENSMUST00000026607 DaxxO35613 739 aa10.06□□□□□ -0.8
Chm-201ENSMUST00000026607 Gapvd1Q6PAR5 1458 aa10.06□□□□□ -0.8
Chm-201ENSMUST00000026607 Utp14aQ640M1 767 aaKnown RBP10.05□□□□□ -0.8
Chm-201ENSMUST00000026607 Zcchc11B2RX14 1644 aaKnown RBP10.05□□□□□ -0.8
Chm-201ENSMUST00000026607 ArxO35085 564 aa10.05□□□□□ -0.8
Chm-201ENSMUST00000026607 Abcc3B2RX12 1523 aa10.05□□□□□ -0.8
Chm-201ENSMUST00000026607 Sbno1Q689Z5 1390 aa10.05□□□□□ -0.8
Chm-201ENSMUST00000026607 Mink1Q9JM52 1308 aa10.05□□□□□ -0.8
Chm-201ENSMUST00000026607 Tsen2Q6P7W5 460 aa10.05□□□□□ -0.8
Chm-201ENSMUST00000026607 NhsB1AV60 1647 aa10.04□□□□□ -0.8
Chm-201ENSMUST00000026607 Neurl4Q5NCX5 1563 aa10.04□□□□□ -0.8
Chm-201ENSMUST00000026607 Ccdc27Q3V036 639 aa10.04□□□□□ -0.8
Chm-201ENSMUST00000026607 Kif1bQ60575 1816 aaKnown RBP10.04□□□□□ -0.8
Chm-201ENSMUST00000026607 Kdm5cP41230 1554 aa10.04□□□□□ -0.8
Chm-201ENSMUST00000026607 Hecw1Q8K4P8 1604 aa10.03□□□□□ -0.8
Chm-201ENSMUST00000026607 Armcx1Q9CX83 456 aa10.03□□□□□ -0.8
Chm-201ENSMUST00000026607 Ksr2Q3UVC0 959 aa10.02□□□□□ -0.8
Chm-201ENSMUST00000026607 Cep170Q6A065 1588 aa10.02□□□□□ -0.8
Chm-201ENSMUST00000026607 Safb2Q80YR5 991 aaKnown RBP10.02□□□□□ -0.81
Chm-201ENSMUST00000026607 Rsph4aQ8BYM7 716 aa10.02□□□□□ -0.81
Chm-201ENSMUST00000026607 Liat1Q810M6 228 aa10.02□□□□□ -0.81
Chm-201ENSMUST00000026607 Iqgap1Q9JKF1 1657 aaKnown RBP10.02□□□□□ -0.81
Chm-201ENSMUST00000026607 Hsp90ab1P11499 724 aaKnown RBP10.01□□□□□ -0.81
Chm-201ENSMUST00000026607 Tulp4Q9JIL5 1547 aa10.01□□□□□ -0.81
Chm-201ENSMUST00000026607 Slc52a2Q9D8F3 450 aa10.01□□□□□ -0.81
Chm-201ENSMUST00000026607 Znf518aB2RRF6 1478 aaKnown RBP10.01□□□□□ -0.81
Chm-201ENSMUST00000026607 Erbb3Q61526 1339 aa10.01□□□□□ -0.81
Chm-201ENSMUST00000026607 Abca8bQ8K440 1620 aa10.01□□□□□ -0.81
Chm-201ENSMUST00000026607 Kiaa1210E9Q0C6 1637 aa10.01□□□□□ -0.81
Chm-201ENSMUST00000026607 Ttll13A4Q9F6 804 aa10□□□□□ -0.81
Chm-201ENSMUST00000026607 4930567H17RikQ3V0K5 233 aa10□□□□□ -0.81
Chm-201ENSMUST00000026607 Gm16486A0A1D5RMD1 1434 aa10□□□□□ -0.81
Chm-201ENSMUST00000026607 Ecm2Q5FW85 670 aa10□□□□□ -0.81
Chm-201ENSMUST00000026607 AatkQ80YE4 1365 aa10□□□□□ -0.81
Chm-201ENSMUST00000026607 Q9D9H8 365 aa10□□□□□ -0.81
Chm-201ENSMUST00000026607 Atf7ipQ7TT18 1306 aa9.99□□□□□ -0.81
Chm-201ENSMUST00000026607 ChgaP26339 463 aaKnown RBP9.99□□□□□ -0.81
Chm-201ENSMUST00000026607 Ppm1gQ61074 542 aa9.99□□□□□ -0.81
Chm-201ENSMUST00000026607 Ccar1Q8CH18 1146 aaKnown RBP9.99□□□□□ -0.81
Chm-201ENSMUST00000026607 Tex14Q7M6U3 1450 aa9.99□□□□□ -0.81
Chm-201ENSMUST00000026607 Gm6268A2A3U9 297 aa9.99□□□□□ -0.81
Chm-201ENSMUST00000026607 Psme1P97371 249 aa9.99□□□□□ -0.81
Chm-201ENSMUST00000026607 Gm156Q58A37 223 aa9.99□□□□□ -0.81
Chm-201ENSMUST00000026607 Birc3O08863 600 aa9.98□□□□□ -0.81
Chm-201ENSMUST00000026607 Gsto1O09131 240 aa9.98□□□□□ -0.81
Chm-201ENSMUST00000026607 Znf316Q6PGE4 1016 aa9.98□□□□□ -0.81
Chm-201ENSMUST00000026607 NudcO35685 332 aaKnown RBP9.98□□□□□ -0.81
Chm-201ENSMUST00000026607 Txndc2Q6P902 515 aa9.98□□□□□ -0.81
Chm-201ENSMUST00000026607 PtprtQ99M80 1454 aa9.98□□□□□ -0.81
Chm-201ENSMUST00000026607 Adamts13Q769J6 1426 aa9.98□□□□□ -0.81
Chm-201ENSMUST00000026607 Hsp90aa1P07901 733 aaKnown RBP9.98□□□□□ -0.81
Chm-201ENSMUST00000026607 Cdc42bpbQ7TT50 1713 aa9.98□□□□□ -0.81
Chm-201ENSMUST00000026607 Atp2b2Q9R0K7 1198 aa9.98□□□□□ -0.81
Chm-201ENSMUST00000026607 Nos1Q9Z0J4 1429 aa9.97□□□□□ -0.81
Chm-201ENSMUST00000026607 Gli2Q0VGT2 1544 aa9.97□□□□□ -0.81
Chm-201ENSMUST00000026607 Cald1E9QA15 768 aaKnown RBP9.97□□□□□ -0.81
Chm-201ENSMUST00000026607 Pank1Q8K4K6 548 aa9.97□□□□□ -0.81
Chm-201ENSMUST00000026607 Apaf1O88879 1249 aa9.97□□□□□ -0.81
Chm-201ENSMUST00000026607 Afap1Q80YS6 731 aa9.97□□□□□ -0.81
Chm-201ENSMUST00000026607 AnkarA2RT91 1465 aa9.97□□□□□ -0.81
Chm-201ENSMUST00000026607 Trim58Q5NCC9 485 aa9.97□□□□□ -0.81
Chm-201ENSMUST00000026607 Chd1P40201 1711 aa9.97□□□□□ -0.81
Chm-201ENSMUST00000026607 Nphp4P59240 1425 aa9.96□□□□□ -0.81
Chm-201ENSMUST00000026607 Ptch1Q61115 1434 aa9.96□□□□□ -0.82
Chm-201ENSMUST00000026607 Setd1aE9PYH6 1716 aa9.95□□□□□ -0.82
Chm-201ENSMUST00000026607 Dnai1Q8C0M8 701 aa9.95□□□□□ -0.82
Chm-201ENSMUST00000026607 Map4k4P97820 1233 aaKnown RBP9.94□□□□□ -0.82
Chm-201ENSMUST00000026607 DiexfQ8BTT6 772 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms