RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Sall3Q62255 1320 aa28.19■■■□□ 2.1
Trim47-201ENSMUST00000021120 Ehbp1l1Q99MS7 1716 aa28.19■■■□□ 2.1
Trim47-201ENSMUST00000021120 Efcab6Q6P1E8 1516 aa28.19■■■□□ 2.1
Trim47-201ENSMUST00000021120 Mapk8ip2Q9ERE9 830 aa28.19■■■□□ 2.1
Trim47-201ENSMUST00000021120 Arhgap23Q69ZH9 1483 aa28.18■■■□□ 2.1
Trim47-201ENSMUST00000021120 Gm13697A2AK42 830 aa28.18■■■□□ 2.1
Trim47-201ENSMUST00000021120 Safb2Q80YR5 991 aaKnown RBP28.18■■■□□ 2.1
Trim47-201ENSMUST00000021120 Grwd1Q810D6 446 aaKnown RBP28.16■■■□□ 2.1
Trim47-201ENSMUST00000021120 Mug2P28666 1451 aa28.15■■■□□ 2.1
Trim47-201ENSMUST00000021120 Tulp4Q9JIL5 1547 aa28.14■■■□□ 2.09
Trim47-201ENSMUST00000021120 PrkcshO08795 521 aa28.14■■■□□ 2.09
Trim47-201ENSMUST00000021120 Skint5A7XUY5 1461 aa28.13■■■□□ 2.09
Trim47-201ENSMUST00000021120 Cpsf1Q9EPU4 1441 aaKnown RBP28.13■■■□□ 2.09
Trim47-201ENSMUST00000021120 Uggt1Q6P5E4 1551 aa28.13■■■□□ 2.09
Trim47-201ENSMUST00000021120 Polr3aB2RXC6 1390 aa28.12■■■□□ 2.09
Trim47-201ENSMUST00000021120 Adamts13Q769J6 1426 aa28.12■■■□□ 2.09
Trim47-201ENSMUST00000021120 Ahdc1Q6PAL7 1594 aaKnown RBP28.11■■■□□ 2.09
Trim47-201ENSMUST00000021120 Anp32aO35381 247 aa28.1■■■□□ 2.09
Trim47-201ENSMUST00000021120 Cdk13Q69ZA1 1511 aaKnown RBP28.09■■■□□ 2.09
Trim47-201ENSMUST00000021120 Ifit1bl1D3Z6F0 470 aa28.09■■■□□ 2.09
Trim47-201ENSMUST00000021120 AatkQ80YE4 1365 aa28.08■■■□□ 2.09
Trim47-201ENSMUST00000021120 Dapk1Q80YE7 1442 aa28.07■■■□□ 2.08
Trim47-201ENSMUST00000021120 Alpk3Q924C5 1678 aa28.05■■■□□ 2.08
Trim47-201ENSMUST00000021120 Mroh1E0CZ22 1640 aa28.02■■■□□ 2.08
Trim47-201ENSMUST00000021120 Med14A2ABV5 1459 aaKnown RBP28.01■■■□□ 2.07
Trim47-201ENSMUST00000021120 Kif13aQ9EQW7 1749 aa27.99■■■□□ 2.07
Trim47-201ENSMUST00000021120 RalgapbQ8BQZ4 1484 aa27.98■■■□□ 2.07
Trim47-201ENSMUST00000021120 Rims1Q99NE5 1463 aa27.98■■■□□ 2.07
Trim47-201ENSMUST00000021120 Rundc1Q0VDN7 615 aa27.98■■■□□ 2.07
Trim47-201ENSMUST00000021120 Cep152A2AUM9 1736 aaKnown RBP27.98■■■□□ 2.07
Trim47-201ENSMUST00000021120 Ercc6l2Q9JIM3 1537 aa27.96■■■□□ 2.07
Trim47-201ENSMUST00000021120 Plxnc1Q9QZC2 1574 aa27.95■■■□□ 2.06
Trim47-201ENSMUST00000021120 Card11Q8CIS0 1159 aa27.95■■■□□ 2.06
Trim47-201ENSMUST00000021120 Itsn1Q9Z0R4 1714 aa27.94■■■□□ 2.06
Trim47-201ENSMUST00000021120 Kdm2aP59997 1161 aa27.92■■■□□ 2.06
Trim47-201ENSMUST00000021120 MlecQ6ZQI3 291 aaKnown RBP27.92■■■□□ 2.06
Trim47-201ENSMUST00000021120 Smg6P61406 1418 aaKnown RBP27.91■■■□□ 2.06
Trim47-201ENSMUST00000021120 Dip2bQ3UH60 1574 aa27.91■■■□□ 2.06
Trim47-201ENSMUST00000021120 Prrc2bQ7TPM1 1486 aaKnown RBP27.9■■■□□ 2.06
Trim47-201ENSMUST00000021120 Sin3aQ60520 1274 aaKnown RBP27.9■■■□□ 2.06
Trim47-201ENSMUST00000021120 PtprmP28828 1452 aa27.89■■■□□ 2.05
Trim47-201ENSMUST00000021120 Calr4Q3TQS0 420 aa27.88■■■□□ 2.05
Trim47-201ENSMUST00000021120 Os9Q8K2C7 672 aa27.88■■■□□ 2.05
Trim47-201ENSMUST00000021120 Naip7Q9JIB3 1402 aa27.88■■■□□ 2.05
Trim47-201ENSMUST00000021120 Myo3aQ8K3H5 1613 aa27.88■■■□□ 2.05
Trim47-201ENSMUST00000021120 Rtl5Q5DTT4 599 aa27.87■■■□□ 2.05
Trim47-201ENSMUST00000021120 Myom1Q62234 1667 aaKnown RBP27.86■■■□□ 2.05
Trim47-201ENSMUST00000021120 MyclP10166 368 aa27.86■■■□□ 2.05
Trim47-201ENSMUST00000021120 Kdm5aQ3UXZ9 1690 aa27.85■■■□□ 2.05
Trim47-201ENSMUST00000021120 Amer1Q7TS75 1132 aa27.85■■■□□ 2.05
Trim47-201ENSMUST00000021120 Srpk2O54781 681 aaKnown RBP27.84■■■□□ 2.05
Trim47-201ENSMUST00000021120 AU022751B1B0V2 589 aa27.84■■■□□ 2.05
Trim47-201ENSMUST00000021120 Chd2E9PZM4 1827 aaKnown RBP27.82■■■□□ 2.04
Trim47-201ENSMUST00000021120 Cdk5rap2Q8K389 1822 aa27.82■■■□□ 2.04
Trim47-201ENSMUST00000021120 4930407I10RikD3Z5T8 1512 aa27.81■■■□□ 2.04
Trim47-201ENSMUST00000021120 Gm20521D3Z5F7 333 aa27.81■■■□□ 2.04
Trim47-201ENSMUST00000021120 Cwc22Q8C5N3 908 aaKnown RBP27.8■■■□□ 2.04
Trim47-201ENSMUST00000021120 Fan1Q69ZT1 1020 aa27.78■■■□□ 2.04
Trim47-201ENSMUST00000021120 Zc3h13E9Q784 1729 aaKnown RBP27.78■■■□□ 2.04
Trim47-201ENSMUST00000021120 Nolc1E9Q5C9 702 aaKnown RBP27.77■■■□□ 2.04
Trim47-201ENSMUST00000021120 Ncoa1P70365 1447 aa27.77■■■□□ 2.04
Trim47-201ENSMUST00000021120 P3h3Q8CG70 732 aa27.74■■■□□ 2.03
Trim47-201ENSMUST00000021120 Atp1b4Q99ME6 356 aa27.73■■■□□ 2.03
Trim47-201ENSMUST00000021120 PplQ9R269 1755 aa27.72■■■□□ 2.03
Trim47-201ENSMUST00000021120 Rock2P70336 1388 aa27.72■■■□□ 2.03
Trim47-201ENSMUST00000021120 Slc52a2Q9D8F3 450 aa27.72■■■□□ 2.03
Trim47-201ENSMUST00000021120 Bcl9Q9D219 1425 aa27.71■■■□□ 2.03
Trim47-201ENSMUST00000021120 Sipa1l1Q8C0T5 1782 aa27.7■■■□□ 2.03
Trim47-201ENSMUST00000021120 Txndc2Q6P902 515 aa27.7■■■□□ 2.02
Trim47-201ENSMUST00000021120 Arhgef28P97433 1693 aa27.7■■■□□ 2.02
Trim47-201ENSMUST00000021120 Gemin5Q8BX17 1502 aaKnown RBP27.7■■■□□ 2.02
Trim47-201ENSMUST00000021120 Puf60Q3UEB3 564 aaKnown RBP27.69■■■□□ 2.02
Trim47-201ENSMUST00000021120 Eif2ak4Q9QZ05 1648 aa27.69■■■□□ 2.02
Trim47-201ENSMUST00000021120 Setd1aE9PYH6 1716 aa27.68■■■□□ 2.02
Trim47-201ENSMUST00000021120 Zbtb4Q5F293 982 aa27.68■■■□□ 2.02
Trim47-201ENSMUST00000021120 Srcin1Q9QWI6 1250 aa27.67■■■□□ 2.02
Trim47-201ENSMUST00000021120 Lrrc7Q80TE7 1490 aa27.66■■■□□ 2.02
Trim47-201ENSMUST00000021120 Shq1Q7TMX5 569 aa27.65■■■□□ 2.02
Trim47-201ENSMUST00000021120 Topaz1E5FYH1 1653 aa27.65■■■□□ 2.02
Trim47-201ENSMUST00000021120 Stard8Q8K031 1019 aa27.65■■■□□ 2.02
Trim47-201ENSMUST00000021120 DnmbpQ6TXD4 1580 aa27.64■■■□□ 2.01
Trim47-201ENSMUST00000021120 Usp40Q8BWR4 1235 aa27.64■■■□□ 2.01
Trim47-201ENSMUST00000021120 Nphp4P59240 1425 aa27.63■■■□□ 2.01
Trim47-201ENSMUST00000021120 Psme1P97371 249 aa27.63■■■□□ 2.01
Trim47-201ENSMUST00000021120 Gm13695A2AK44 830 aa27.62■■■□□ 2.01
Trim47-201ENSMUST00000021120 Pola1P33609 1465 aa27.6■■■□□ 2.01
Trim47-201ENSMUST00000021120 Gtf2e1Q9D0D5 440 aa27.6■■■□□ 2.01
Trim47-201ENSMUST00000021120 Q9D9H8 365 aa27.6■■■□□ 2.01
Trim47-201ENSMUST00000021120 PalldQ9ET54 1408 aa27.59■■■□□ 2.01
Trim47-201ENSMUST00000021120 MaddQ80U28 1577 aa27.59■■■□□ 2.01
Trim47-201ENSMUST00000021120 GphnQ8BUV3 769 aaKnown RBP27.59■■■□□ 2.01
Trim47-201ENSMUST00000021120 Supt16hQ920B9 1047 aa27.59■■■□□ 2.01
Trim47-201ENSMUST00000021120 Dip2aQ8BWT5 1523 aa27.58■■■□□ 2.01
Trim47-201ENSMUST00000021120 Itsn2Q9Z0R6 1659 aa27.56■■■□□ 2
Trim47-201ENSMUST00000021120 Ift172Q6VH22 1749 aa27.56■■■□□ 2
Trim47-201ENSMUST00000021120 Arid4bA2CG63 1314 aaKnown RBP27.54■■■□□ 2
Trim47-201ENSMUST00000021120 IqubQ8CDK3 788 aa27.53■■■□□ 2
Trim47-201ENSMUST00000021120 Plekhg5Q66T02 1073 aa27.52■■■□□ 2
Trim47-201ENSMUST00000021120 Stag3O70576 1240 aa27.51■■□□□ 1.99
Trim47-201ENSMUST00000021120 Stk26Q99JT2 416 aa27.51■■□□□ 1.99
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms