RNA–Protein interactions for RNA: ENSMUST00000020034.5

Echdc1-201, Transcript of Ethylmalonyl-CoA decarboxylase, mousemouse

TSL 1 (best) BASIC

Gene Echdc1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1-201ENSMUST00000020034 Dnajc5bQ9CQ94 199 aa13.22□□□□□ -0.29
Echdc1-201ENSMUST00000020034 Rapgef6Q5NCJ1 1609 aa13.22□□□□□ -0.29
Echdc1-201ENSMUST00000020034 DroshaQ5HZJ0 1373 aaKnown RBP13.21□□□□□ -0.29
Echdc1-201ENSMUST00000020034 Trim58Q5NCC9 485 aa13.21□□□□□ -0.29
Echdc1-201ENSMUST00000020034 Stk26Q99JT2 416 aa13.21□□□□□ -0.29
Echdc1-201ENSMUST00000020034 Cpsf1Q9EPU4 1441 aaKnown RBP13.21□□□□□ -0.29
Echdc1-201ENSMUST00000020034 Gcc2Q8CHG3 1679 aa13.21□□□□□ -0.29
Echdc1-201ENSMUST00000020034 Shroom2A2ALU4 1481 aa13.21□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Atp7aQ64430 1491 aa13.2□□□□□ -0.3
Echdc1-201ENSMUST00000020034 GsdmaQ9EST1 446 aa13.2□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Setbp1Q9Z180 1582 aa13.2□□□□□ -0.3
Echdc1-201ENSMUST00000020034 SphkapQ6NSW3 1687 aa13.2□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Apaf1O88879 1249 aa13.19□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Arhgap5P97393 1501 aa13.19□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Tsen2Q6P7W5 460 aa13.18□□□□□ -0.3
Echdc1-201ENSMUST00000020034 AU015836B2RUM3 263 aa13.18□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Atxn3Q9CVD2 355 aa13.18□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Zmym4A2A791 1549 aaKnown RBP13.18□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Prdm16A2A935 1275 aa13.17□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Lemd3Q9WU40 921 aa13.17□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Tmco5bQ80X59 307 aa13.17□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Prex2Q3LAC4 1598 aa13.17□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Ssh2Q5SW75 1423 aa13.17□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Trappc8E9PWG2 1437 aa13.16□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Gas2l2Q5SSG4 860 aa13.16□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Tnpo1Q8BFY9 898 aaKnown RBP13.15□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Neo1P97798 1493 aa13.15□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Kdm2bQ6P1G2 1309 aa13.15□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Kif14L0N7N1 1674 aaKnown RBP13.15□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Ccar1Q8CH18 1146 aaKnown RBP13.15□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Caskin1Q6P9K8 1431 aa13.15□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Fam135aQ6NS59 1506 aa13.15□□□□□ -0.3
Echdc1-201ENSMUST00000020034 Map7O88735 730 aa13.14□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Stard8Q8K031 1019 aa13.14□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Kif21aQ9QXL2 1672 aa13.14□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Nsd2Q8BVE8 1365 aa13.14□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Mbd5B1AYB6 1498 aa13.14□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Mink1Q9JM52 1308 aa13.14□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Puf60Q3UEB3 564 aaKnown RBP13.14□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Map3k4O08648 1597 aa13.13□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Adamts12Q811B3 1600 aa13.13□□□□□ -0.31
Echdc1-201ENSMUST00000020034 TnikP83510 1323 aa13.11□□□□□ -0.31
Echdc1-201ENSMUST00000020034 GorabQ8BRM2 368 aa13.11□□□□□ -0.31
Echdc1-201ENSMUST00000020034 PtprgQ05909 1442 aa13.11□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Ppp2r3aB2RXC8 1150 aa13.11□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Ccdc60Q8C4J0 545 aa13.11□□□□□ -0.31
Echdc1-201ENSMUST00000020034 ErbinQ80TH2 1402 aa13.11□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Ppp1r9bQ6R891 817 aaKnown RBP13.1□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Trim44Q9QXA7 346 aa13.1□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Nutm1Q8BHP2 1126 aa13.1□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Ylpm1Q9R0I7 1386 aaKnown RBP13.1□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Rfx1P48377 963 aa13.1□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Plin1Q8CGN5 517 aa13.1□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Rabep1O35551 862 aa13.09□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Arhgef11Q68FM7 1552 aa13.09□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Uspl1Q3ULM6 1089 aa13.09□□□□□ -0.31
Echdc1-201ENSMUST00000020034 Ipo4Q8VI75 1082 aa13.08□□□□□ -0.32
Echdc1-201ENSMUST00000020034 KnstrnQ9D9Z1 312 aaKnown RBP13.08□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Nup160Q9Z0W3 1402 aaKnown RBP13.07□□□□□ -0.32
Echdc1-201ENSMUST00000020034 1700019A02RikA0A087WPV9 146 aa13.07□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Duxf3A0A0N4SV92 674 aa13.07□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Sptbn5F6UCX4 1208 aa13.07□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Nectin2P32507 530 aa13.07□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Mapkbp1Q6NS57 1503 aa13.06□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Lamc1P02468 1607 aaKnown RBP13.05□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Dusp27Q148W8 1138 aa13.05□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Supt6hQ62383 1726 aaKnown RBP13.05□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Atf7ipQ7TT18 1306 aa13.05□□□□□ -0.32
Echdc1-201ENSMUST00000020034 U2surpQ6NV83 1029 aaKnown RBP13.05□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Atl3Q91YH5 541 aa13.05□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Rlbp1Q9Z275 317 aa13.05□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Fgd6Q69ZL1 1399 aa13.04□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Fgd1P52734 960 aa13.04□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Kiaa1551Q5DTW7 1521 aa13.04□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Cald1E9QA15 768 aaKnown RBP13.04□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Birc3O08863 600 aa13.04□□□□□ -0.32
Echdc1-201ENSMUST00000020034 SlkO54988 1233 aa13.04□□□□□ -0.32
Echdc1-201ENSMUST00000020034 G3bp1P97855 465 aaKnown RBP13.04□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Fancd2Q80V62 1450 aa13.03□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Tex14Q7M6U3 1450 aa13.03□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Ttc21bQ0HA38 1315 aa13.03□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Lrrc9Q8CDN9 1456 aa13.03□□□□□ -0.32
Echdc1-201ENSMUST00000020034 CenpjQ569L8 1344 aa13.02□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Gm14025A2AP89 1413 aa13.02□□□□□ -0.32
Echdc1-201ENSMUST00000020034 Znf316Q6PGE4 1016 aa13.01□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Map4k4P97820 1233 aaKnown RBP13.01□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Cog6Q8R3I3 657 aa13□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Rbm25B2RY56 838 aaKnown RBP13□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Znf692Q3U381 531 aa13□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Gm16486A0A1D5RMD1 1434 aa13□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Dot1lQ6XZL8 1540 aa13□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Zranb1Q7M760 708 aa12.99□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Ccdc146E9Q9F7 977 aa12.99□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Adgrl2Q8JZZ7 1487 aa12.99□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Sbno1Q689Z5 1390 aa12.99□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Pnmal2G3X9N3 661 aa12.99□□□□□ -0.33
Echdc1-201ENSMUST00000020034 PtmaP26350 111 aa12.99□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Kif18aQ91WD7 886 aa12.99□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Ssh1Q76I79 1042 aa12.98□□□□□ -0.33
Echdc1-201ENSMUST00000020034 Pdcl3Q8BVF2 240 aa12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms