RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Atp10dQ8K2X1 1416 aa14.95□□□□□ -0.02
Vps54-201ENSMUST00000006221 ShprhQ7TPQ3 1674 aa14.94□□□□□ -0.02
Vps54-201ENSMUST00000006221 Sbno1Q689Z5 1390 aa14.94□□□□□ -0.02
Vps54-201ENSMUST00000006221 Os9Q8K2C7 672 aa14.94□□□□□ -0.02
Vps54-201ENSMUST00000006221 NhsB1AV60 1647 aa14.94□□□□□ -0.02
Vps54-201ENSMUST00000006221 Prdm10Q3UTQ7 1184 aa14.94□□□□□ -0.02
Vps54-201ENSMUST00000006221 Dbr1Q923B1 550 aa14.94□□□□□ -0.02
Vps54-201ENSMUST00000006221 Rab3gap2Q8BMG7 1366 aa14.93□□□□□ -0.02
Vps54-201ENSMUST00000006221 Abcc6Q9R1S7 1498 aa14.92□□□□□ -0.02
Vps54-201ENSMUST00000006221 Hecw1Q8K4P8 1604 aa14.92□□□□□ -0.02
Vps54-201ENSMUST00000006221 Neurod2Q62414 383 aa14.91□□□□□ -0.02
Vps54-201ENSMUST00000006221 Kif3bQ61771 747 aa14.91□□□□□ -0.02
Vps54-201ENSMUST00000006221 Kif1bQ60575 1816 aaKnown RBP14.91□□□□□ -0.02
Vps54-201ENSMUST00000006221 Nsd2Q8BVE8 1365 aa14.91□□□□□ -0.02
Vps54-201ENSMUST00000006221 Arid4bA2CG63 1314 aaKnown RBP14.9□□□□□ -0.02
Vps54-201ENSMUST00000006221 Gm20521D3Z5F7 333 aa14.9□□□□□ -0.02
Vps54-201ENSMUST00000006221 Stk24Q99KH8 431 aa14.9□□□□□ -0.02
Vps54-201ENSMUST00000006221 Iqcf3Q9D498 203 aa14.9□□□□□ -0.02
Vps54-201ENSMUST00000006221 Speer4f1Q9D5Q6 258 aa14.9□□□□□ -0.02
Vps54-201ENSMUST00000006221 PrkcshO08795 521 aa14.89□□□□□ -0.03
Vps54-201ENSMUST00000006221 Kif7B7ZNG0 1348 aa14.89□□□□□ -0.03
Vps54-201ENSMUST00000006221 Rwdd1Q9CQK7 243 aa14.89□□□□□ -0.03
Vps54-201ENSMUST00000006221 Kdm2bQ6P1G2 1309 aa14.89□□□□□ -0.03
Vps54-201ENSMUST00000006221 Kidins220E9Q9B7 1793 aa14.89□□□□□ -0.03
Vps54-201ENSMUST00000006221 Abcc1O35379 1528 aa14.89□□□□□ -0.03
Vps54-201ENSMUST00000006221 Fan1Q69ZT1 1020 aa14.88□□□□□ -0.03
Vps54-201ENSMUST00000006221 Abca8bQ8K440 1620 aa14.88□□□□□ -0.03
Vps54-201ENSMUST00000006221 Dcaf11Q91VU6 549 aa14.88□□□□□ -0.03
Vps54-201ENSMUST00000006221 Ttc41Q692V3 1318 aa14.87□□□□□ -0.03
Vps54-201ENSMUST00000006221 Pola1P33609 1465 aa14.87□□□□□ -0.03
Vps54-201ENSMUST00000006221 Xrn1P97789 1719 aaKnown RBP14.86□□□□□ -0.03
Vps54-201ENSMUST00000006221 Usp40Q8BWR4 1235 aa14.86□□□□□ -0.03
Vps54-201ENSMUST00000006221 Usp19Q3UJD6 1360 aa14.86□□□□□ -0.03
Vps54-201ENSMUST00000006221 Plekhh1Q80TI1 1356 aa14.85□□□□□ -0.03
Vps54-201ENSMUST00000006221 Cnga1P29974 684 aa14.85□□□□□ -0.03
Vps54-201ENSMUST00000006221 Ccdc30Q8BVF4 654 aa14.85□□□□□ -0.03
Vps54-201ENSMUST00000006221 Nlrp6Q91WS2 869 aa14.85□□□□□ -0.03
Vps54-201ENSMUST00000006221 Chd1P40201 1711 aa14.85□□□□□ -0.03
Vps54-201ENSMUST00000006221 Atf7ipQ7TT18 1306 aa14.85□□□□□ -0.03
Vps54-201ENSMUST00000006221 Gas2l2Q5SSG4 860 aa14.85□□□□□ -0.03
Vps54-201ENSMUST00000006221 Gtf2e1Q9D0D5 440 aa14.85□□□□□ -0.03
Vps54-201ENSMUST00000006221 Ylpm1Q9R0I7 1386 aaKnown RBP14.84□□□□□ -0.03
Vps54-201ENSMUST00000006221 Kiaa1210E9Q0C6 1637 aa14.84□□□□□ -0.03
Vps54-201ENSMUST00000006221 Clasp1Q80TV8 1535 aaKnown RBP14.84□□□□□ -0.03
Vps54-201ENSMUST00000006221 Col17a1Q07563 1470 aa14.84□□□□□ -0.03
Vps54-201ENSMUST00000006221 Nkx1-2P42580 305 aa14.84□□□□□ -0.03
Vps54-201ENSMUST00000006221 Uggt2E9Q4X2 1504 aa14.84□□□□□ -0.03
Vps54-201ENSMUST00000006221 Abca17E9PX95 1733 aa14.83□□□□□ -0.04
Vps54-201ENSMUST00000006221 Ttc21bQ0HA38 1315 aa14.83□□□□□ -0.04
Vps54-201ENSMUST00000006221 Chmp5Q9D7S9 219 aa14.83□□□□□ -0.04
Vps54-201ENSMUST00000006221 Mbd3Q9Z2D8 285 aaKnown RBP14.83□□□□□ -0.04
Vps54-201ENSMUST00000006221 Srpk2O54781 681 aaKnown RBP14.82□□□□□ -0.04
Vps54-201ENSMUST00000006221 Tspyl2Q7TQI8 677 aa14.82□□□□□ -0.04
Vps54-201ENSMUST00000006221 Hdac5Q9Z2V6 1113 aa14.82□□□□□ -0.04
Vps54-201ENSMUST00000006221 Arid3cA6PWV5 409 aa14.81□□□□□ -0.04
Vps54-201ENSMUST00000006221 CanxP35564 591 aaKnown RBP14.81□□□□□ -0.04
Vps54-201ENSMUST00000006221 Kiaa1107Q80TK0 1369 aa14.8□□□□□ -0.04
Vps54-201ENSMUST00000006221 EspnQ9ET47 871 aa14.8□□□□□ -0.04
Vps54-201ENSMUST00000006221 Myo3aQ8K3H5 1613 aa14.8□□□□□ -0.04
Vps54-201ENSMUST00000006221 ErbinQ80TH2 1402 aa14.79□□□□□ -0.04
Vps54-201ENSMUST00000006221 Golga2Q921M4 999 aa14.79□□□□□ -0.04
Vps54-201ENSMUST00000006221 Itsn2Q9Z0R6 1659 aa14.79□□□□□ -0.04
Vps54-201ENSMUST00000006221 Myo5cE9Q1F5 1742 aa14.78□□□□□ -0.04
Vps54-201ENSMUST00000006221 Hsp90aa1P07901 733 aaKnown RBP14.78□□□□□ -0.04
Vps54-201ENSMUST00000006221 AnkarA2RT91 1465 aa14.78□□□□□ -0.04
Vps54-201ENSMUST00000006221 Sart3Q9JLI8 962 aaKnown RBP14.78□□□□□ -0.04
Vps54-201ENSMUST00000006221 AatkQ80YE4 1365 aa14.77□□□□□ -0.04
Vps54-201ENSMUST00000006221 Smc5Q8CG46 1101 aaKnown RBP14.77□□□□□ -0.05
Vps54-201ENSMUST00000006221 Abca6Q8K441 1624 aa14.77□□□□□ -0.05
Vps54-201ENSMUST00000006221 Kdm5aQ3UXZ9 1690 aa14.76□□□□□ -0.05
Vps54-201ENSMUST00000006221 NudcO35685 332 aaKnown RBP14.76□□□□□ -0.05
Vps54-201ENSMUST00000006221 Atxn3Q9CVD2 355 aa14.76□□□□□ -0.05
Vps54-201ENSMUST00000006221 Nos1Q9Z0J4 1429 aa14.76□□□□□ -0.05
Vps54-201ENSMUST00000006221 Pank1Q8K4K6 548 aa14.76□□□□□ -0.05
Vps54-201ENSMUST00000006221 Uspl1Q3ULM6 1089 aa14.75□□□□□ -0.05
Vps54-201ENSMUST00000006221 Lemd3Q9WU40 921 aa14.75□□□□□ -0.05
Vps54-201ENSMUST00000006221 P2rx7Q9Z1M0 595 aa14.75□□□□□ -0.05
Vps54-201ENSMUST00000006221 Fndc1E9Q043 1732 aa14.74□□□□□ -0.05
Vps54-201ENSMUST00000006221 Puf60Q3UEB3 564 aaKnown RBP14.74□□□□□ -0.05
Vps54-201ENSMUST00000006221 4930567H17RikQ3V0K5 233 aa14.73□□□□□ -0.05
Vps54-201ENSMUST00000006221 Zfyve16Q80U44 1528 aa14.73□□□□□ -0.05
Vps54-201ENSMUST00000006221 DaxxO35613 739 aa14.73□□□□□ -0.05
Vps54-201ENSMUST00000006221 Iqgap3F8VQ29 1632 aa14.73□□□□□ -0.05
Vps54-201ENSMUST00000006221 Ythdc2B2RR83 1445 aaKnown RBP14.73□□□□□ -0.05
Vps54-201ENSMUST00000006221 Nphp4P59240 1425 aa14.73□□□□□ -0.05
Vps54-201ENSMUST00000006221 Abca9Q8K449 1623 aa14.72□□□□□ -0.05
Vps54-201ENSMUST00000006221 Tmem131lQ3U3D7 1597 aa14.72□□□□□ -0.05
Vps54-201ENSMUST00000006221 Igf1rQ60751 1373 aa14.71□□□□□ -0.05
Vps54-201ENSMUST00000006221 Cdk5rap2Q8K389 1822 aa14.71□□□□□ -0.05
Vps54-201ENSMUST00000006221 Rims1Q99NE5 1463 aa14.71□□□□□ -0.05
Vps54-201ENSMUST00000006221 Cep152A2AUM9 1736 aaKnown RBP14.71□□□□□ -0.05
Vps54-201ENSMUST00000006221 Myom1Q62234 1667 aaKnown RBP14.71□□□□□ -0.05
Vps54-201ENSMUST00000006221 Dnai1Q8C0M8 701 aa14.71□□□□□ -0.06
Vps54-201ENSMUST00000006221 Trim30dE9PWL0 497 aa14.7□□□□□ -0.06
Vps54-201ENSMUST00000006221 Gprasp1Q5U4C1 1347 aa14.69□□□□□ -0.06
Vps54-201ENSMUST00000006221 Stard8Q8K031 1019 aa14.69□□□□□ -0.06
Vps54-201ENSMUST00000006221 Abca8aQ8K442 1620 aa14.69□□□□□ -0.06
Vps54-201ENSMUST00000006221 Eif2s2Q99L45 331 aaKnown RBP14.69□□□□□ -0.06
Vps54-201ENSMUST00000006221 Rlbp1Q9Z275 317 aa14.69□□□□□ -0.06
Vps54-201ENSMUST00000006221 Ralbp1Q62172 648 aa14.68□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms