RNA–Protein interactions for RNA: ENSMUST00000004201.7

Col5a3-201, Transcript of Collagen type V alpha 3 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a3, Length 6,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a3-201ENSMUST00000004201 Rock1P70335 1354 aa17.63■□□□□ 0.41
Col5a3-201ENSMUST00000004201 UacaQ8CGB3 1411 aa17.62■□□□□ 0.41
Col5a3-201ENSMUST00000004201 Kif7B7ZNG0 1348 aa17.62■□□□□ 0.41
Col5a3-201ENSMUST00000004201 CalrP14211 416 aaKnown RBP17.62■□□□□ 0.41
Col5a3-201ENSMUST00000004201 Kri1Q8VDQ9 704 aaKnown RBP17.62■□□□□ 0.41
Col5a3-201ENSMUST00000004201 Ak7Q9D2H2 614 aa17.62■□□□□ 0.41
Col5a3-201ENSMUST00000004201 Usp40Q8BWR4 1235 aa17.62■□□□□ 0.41
Col5a3-201ENSMUST00000004201 Hmgn5Q9JL35 406 aa17.62■□□□□ 0.41
Col5a3-201ENSMUST00000004201 KinQ8K339 391 aa17.61■□□□□ 0.41
Col5a3-201ENSMUST00000004201 Bicd2Q921C5 820 aa17.6■□□□□ 0.41
Col5a3-201ENSMUST00000004201 Ccdc173A0JLY1 547 aa17.6■□□□□ 0.41
Col5a3-201ENSMUST00000004201 Rsph4aQ8BYM7 716 aa17.6■□□□□ 0.41
Col5a3-201ENSMUST00000004201 A0A1L1SQF0 893 aa17.59■□□□□ 0.41
Col5a3-201ENSMUST00000004201 Phldb1Q6PDH0 1371 aaKnown RBP17.59■□□□□ 0.41
Col5a3-201ENSMUST00000004201 Shq1Q7TMX5 569 aa17.59■□□□□ 0.41
Col5a3-201ENSMUST00000004201 A0A0U1RNP2 1173 aa17.58■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Rabep1O35551 862 aa17.58■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Rrp9Q91WM3 475 aaKnown RBP17.58■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Mink1Q9JM52 1308 aa17.58■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Gcom1E9PZ54 550 aa17.57■□□□□ 0.4
Col5a3-201ENSMUST00000004201 MyzapQ3UIJ9 466 aa17.57■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Rec8Q8C5S7 591 aa17.57■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Fam184bQ0KK56 942 aa17.57■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Kif3aP28741 701 aa17.57■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Krt82Q99M74 516 aa17.57■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Synj1Q8CHC4 1574 aa17.57■□□□□ 0.4
Col5a3-201ENSMUST00000004201 EzrP26040 586 aaKnown RBP17.56■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Triml2E9PW10 424 aa17.55■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Chaf1aQ9QWF0 911 aa17.55■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Esx1O88933 382 aa17.54■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Rsph6aQ8CDR2 708 aa17.54■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Rbm10Q99KG3 930 aaKnown RBP17.53■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Hook1Q8BIL5 728 aa17.53■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Ncbp3Q8BZR9 615 aaKnown RBP17.53■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Tceal9Q9DD24 104 aa17.53■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Odf2A3KGV1 830 aaKnown RBP17.53■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Kif16bB1AVY7 1312 aa17.53■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Smc4Q8CG47 1286 aa17.52■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Evc2Q8K1G2 1220 aa17.52■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Smarca2Q6DIC0 1577 aa17.52■□□□□ 0.4
Col5a3-201ENSMUST00000004201 Cecr2E9Q2Z1 1453 aa17.52■□□□□ 0.39
Col5a3-201ENSMUST00000004201 NaspQ99MD9 773 aaKnown RBP17.52■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Phactr2B1AVP0 632 aa17.5■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Mns1Q61884 491 aa17.5■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Mrvi1Q9WUX5 899 aaKnown RBP17.5■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Dctn1O08788 1281 aa17.5■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Cplx2P84086 134 aa17.5■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Zscan10Q3URR7 782 aa17.5■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Dapk1Q80YE7 1442 aa17.5■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Smarca4Q3TKT4 1613 aaKnown RBP17.5■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Atad2bE9Q166 1460 aaKnown RBP17.5■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Smc3Q9CW03 1217 aaKnown RBP17.5■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Gm21190A0A0G2JGJ6 266 aa17.49■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Gpatch3Q8BIY1 525 aa17.49■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Rab11fip3Q8CHD8 1047 aa17.49■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Def6Q8C2K1 630 aa17.48■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Ccdc43Q9CR29 222 aaKnown RBP17.48■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Cplx1P63040 134 aa17.48■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Trim58Q5NCC9 485 aa17.48■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Chmp4cQ9D7F7 232 aa17.48■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Ciz1Q8VEH2 845 aa17.47■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Cdkn1cP49919 348 aa17.47■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Rnf214Q8BFU3 668 aaKnown RBP17.47■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Chmp7Q8R1T1 451 aa17.47■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Dhx16G3X8X0 1044 aaKnown RBP17.47■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Kif3cO35066 796 aa17.47■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Ddx11Q6AXC6 880 aa17.46■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Hnrnpul1Q8VDM6 859 aaKnown RBP17.46■□□□□ 0.39
Col5a3-201ENSMUST00000004201 PogkQ80TC5 607 aa17.46■□□□□ 0.39
Col5a3-201ENSMUST00000004201 BbxQ8VBW5 907 aa17.46■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Cttnbp2B9EJA2 1648 aa17.46■□□□□ 0.39
Col5a3-201ENSMUST00000004201 Mad1l1Q9WTX8 717 aaKnown RBP17.45■□□□□ 0.38
Col5a3-201ENSMUST00000004201 HmmrQ00547 794 aaKnown RBP17.45■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Usp16Q99LG0 825 aa17.45■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Wdr78E9PYY5 807 aa17.45■□□□□ 0.38
Col5a3-201ENSMUST00000004201 WrnO09053 1401 aa17.45■□□□□ 0.38
Col5a3-201ENSMUST00000004201 FosbP13346 338 aa17.44■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Ric3Q8BPM6 367 aa17.44■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Ubxn4Q8VCH8 506 aa17.43■□□□□ 0.38
Col5a3-201ENSMUST00000004201 AampJ3QN89 436 aa17.43■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Neurod6P48986 337 aa17.43■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Cc2d2bA0A286YDU8 1405 aa17.43■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Rnf20Q5DTM8 973 aa17.43■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Hmox1P14901 289 aa17.42■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Hap1O35668 628 aa17.42■□□□□ 0.38
Col5a3-201ENSMUST00000004201 ErbinQ80TH2 1402 aa17.42■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Q9D2X8 372 aa17.42■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Fbln2P37889 1221 aa17.41■□□□□ 0.38
Col5a3-201ENSMUST00000004201 LrpprcQ6PB66 1392 aaKnown RBP17.41■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Ccdc30Q8BVF4 654 aa17.41■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Nap1l1P28656 391 aaKnown RBP17.4■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Nectin2P32507 530 aa17.4■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Necab1Q8BG18 352 aa17.4■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Pabpn1Q8CCS6 302 aaKnown RBP17.4■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Gtf2a1Q99PM3 378 aa17.4■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Fam43aQ8BUP8 424 aa17.4■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Rpgrip1lQ8CG73 1264 aa17.4■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Gps2Q921N8 327 aa17.4■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Ccp110Q7TSH4 1004 aa17.4■□□□□ 0.38
Col5a3-201ENSMUST00000004201 Pank1Q8K4K6 548 aa17.39■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 69 ms