RNA–Protein interactions for RNA: ENSMUST00000000767.5

Rpa1-201, Transcript of Replication protein A 70 kDa DNA-binding subunit, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rpa1, Length 2,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1-201ENSMUST00000000767 Mbd3Q9Z2D8 285 aaKnown RBP12.83□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Rab3gap2Q8BMG7 1366 aa12.83□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Sall3Q62255 1320 aa12.83□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Gm16486A0A1D5RMD1 1434 aa12.82□□□□□ -0.36
Rpa1-201ENSMUST00000000767 B4galnt3Q6L8S8 986 aa12.82□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Rwdd1Q9CQK7 243 aa12.82□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Usp54Q8BL06 1588 aaKnown RBP12.81□□□□□ -0.36
Rpa1-201ENSMUST00000000767 NhsB1AV60 1647 aa12.81□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Gm20521D3Z5F7 333 aa12.81□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Atp10dQ8K2X1 1416 aa12.8□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Kif1bQ60575 1816 aaKnown RBP12.8□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Abcc6Q9R1S7 1498 aa12.8□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Ttc41Q692V3 1318 aa12.8□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Nlrp6Q91WS2 869 aa12.79□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Apbb1Q9QXJ1 710 aa12.79□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Kiaa1210E9Q0C6 1637 aa12.79□□□□□ -0.36
Rpa1-201ENSMUST00000000767 ShprhQ7TPQ3 1674 aa12.79□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Speer4f1Q9D5Q6 258 aa12.78□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Dbr1Q923B1 550 aa12.78□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Plekhh1Q80TI1 1356 aa12.78□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Kif7B7ZNG0 1348 aa12.78□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Atf7ipQ7TT18 1306 aa12.78□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Iqcf3Q9D498 203 aa12.78□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Neurod2Q62414 383 aa12.77□□□□□ -0.36
Rpa1-201ENSMUST00000000767 Hsp90aa1P07901 733 aaKnown RBP12.77□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Kif3bQ61771 747 aa12.77□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Gtf2e1Q9D0D5 440 aa12.77□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Pola1P33609 1465 aa12.77□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Stk24Q99KH8 431 aa12.76□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Clasp1Q80TV8 1535 aaKnown RBP12.76□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Abca8bQ8K440 1620 aa12.76□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Kdm2bQ6P1G2 1309 aa12.76□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Abcc1O35379 1528 aa12.76□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Dcaf11Q91VU6 549 aa12.75□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Ylpm1Q9R0I7 1386 aaKnown RBP12.75□□□□□ -0.37
Rpa1-201ENSMUST00000000767 EspnQ9ET47 871 aa12.75□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Prdm10Q3UTQ7 1184 aa12.75□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Srpk2O54781 681 aaKnown RBP12.74□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Kidins220E9Q9B7 1793 aa12.74□□□□□ -0.37
Rpa1-201ENSMUST00000000767 AnkarA2RT91 1465 aa12.74□□□□□ -0.37
Rpa1-201ENSMUST00000000767 CanxP35564 591 aaKnown RBP12.74□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Fan1Q69ZT1 1020 aa12.74□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Ccdc30Q8BVF4 654 aa12.74□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Usp40Q8BWR4 1235 aa12.74□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Abca17E9PX95 1733 aa12.73□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Chmp5Q9D7S9 219 aa12.73□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Uggt2E9Q4X2 1504 aa12.73□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Znf608Q56A10 1511 aa12.73□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Col17a1Q07563 1470 aa12.72□□□□□ -0.37
Rpa1-201ENSMUST00000000767 ErbinQ80TH2 1402 aa12.72□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Ttc21bQ0HA38 1315 aa12.71□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Chd1P40201 1711 aa12.71□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Xrn1P97789 1719 aaKnown RBP12.71□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Itsn2Q9Z0R6 1659 aa12.71□□□□□ -0.37
Rpa1-201ENSMUST00000000767 Usp19Q3UJD6 1360 aa12.71□□□□□ -0.38
Rpa1-201ENSMUST00000000767 PrkcshO08795 521 aa12.71□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Golga2Q921M4 999 aa12.71□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Nkx1-2P42580 305 aa12.7□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Stard8Q8K031 1019 aa12.7□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Cnga1P29974 684 aa12.69□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Ccdc9Q8VC31 543 aaKnown RBP12.69□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Kdm5aQ3UXZ9 1690 aa12.69□□□□□ -0.38
Rpa1-201ENSMUST00000000767 NudcO35685 332 aaKnown RBP12.68□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Myo5cE9Q1F5 1742 aa12.68□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Smc5Q8CG46 1101 aaKnown RBP12.68□□□□□ -0.38
Rpa1-201ENSMUST00000000767 DaxxO35613 739 aa12.68□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Lemd3Q9WU40 921 aa12.67□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Cep152A2AUM9 1736 aaKnown RBP12.67□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Igf1rQ60751 1373 aa12.66□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Sart3Q9JLI8 962 aaKnown RBP12.66□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Tspyl2Q7TQI8 677 aa12.66□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Myo3aQ8K3H5 1613 aa12.66□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Mapk8ip3Q9ESN9 1337 aa12.65□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Dnai1Q8C0M8 701 aa12.65□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Ralbp1Q62172 648 aa12.65□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Nphp4P59240 1425 aa12.65□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Nos1Q9Z0J4 1429 aa12.65□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Kiaa1107Q80TK0 1369 aa12.65□□□□□ -0.38
Rpa1-201ENSMUST00000000767 Arid3cA6PWV5 409 aa12.65□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Uspl1Q3ULM6 1089 aa12.65□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Gas2l2Q5SSG4 860 aa12.65□□□□□ -0.39
Rpa1-201ENSMUST00000000767 AatkQ80YE4 1365 aa12.64□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Zmym3Q9JLM4 1370 aa12.64□□□□□ -0.39
Rpa1-201ENSMUST00000000767 4933416C03RikQ3V063 378 aa12.64□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Abca6Q8K441 1624 aa12.64□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Puf60Q3UEB3 564 aaKnown RBP12.64□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Zfyve16Q80U44 1528 aa12.64□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Iqgap3F8VQ29 1632 aa12.63□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Trim30dE9PWL0 497 aa12.63□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Ppm1gQ61074 542 aa12.63□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Pank1Q8K4K6 548 aa12.63□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Rims1Q99NE5 1463 aa12.62□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Fndc1E9Q043 1732 aa12.62□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Znf518aB2RRF6 1478 aaKnown RBP12.62□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Gprasp1Q5U4C1 1347 aa12.61□□□□□ -0.39
Rpa1-201ENSMUST00000000767 4930567H17RikQ3V0K5 233 aa12.61□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Stag3O70576 1240 aa12.61□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Tmem131lQ3U3D7 1597 aa12.6□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Polr3glQ8R0C0 218 aa12.6□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Ak7Q9D2H2 614 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 45 ms