RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	YPK3	P38070	525 aa		3.38	□□□□□ -1.87
SPN1	YPR133C	YER079W	P40052	210 aa	Known RBP	3.38	□□□□□ -1.87
SPN1	YPR133C	DDI1	P40087	428 aa		3.38	□□□□□ -1.87
SPN1	YPR133C	MAM33	P40513	266 aa		3.38	□□□□□ -1.87
SPN1	YPR133C	PMT5	P52867	743 aa		3.38	□□□□□ -1.87
SPN1	YPR133C	NQM1	P53228	333 aa	Predicted RBP	3.38	□□□□□ -1.87
SPN1	YPR133C	OST6	Q03723	332 aa		3.38	□□□□□ -1.87
SPN1	YPR133C	SPG4	Q04438	115 aa		3.38	□□□□□ -1.87
SPN1	YPR133C	YMR254C	Q04838	102 aa		3.38	□□□□□ -1.87
SPN1	YPR133C	SPC2	Q04969	178 aa		3.38	□□□□□ -1.87
SPN1	YPR133C	YLR173W	Q06247	608 aa		3.38	□□□□□ -1.87
SPN1	YPR133C	ADF1	Q2V2Q1	113 aa		3.38	□□□□□ -1.87
SPN1	YPR133C	RPL12A	P0CX53	165 aa	Known RBP	3.37	□□□□□ -1.87
SPN1	YPR133C	RPL12B	P0CX54	165 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	MSK1	P32048	576 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	APE2	P32454	952 aa	Known RBP	3.37	□□□□□ -1.87
SPN1	YPR133C	SBE22	P38814	852 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	SNL1	P40548	159 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	YIF1	P53845	314 aa	Known RBP	3.37	□□□□□ -1.87
SPN1	YPR133C	AAH1	P53909	347 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	GPI15	P53961	229 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	YKR005C	Q02203	525 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	ARP10	Q04549	284 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	MRPL35	Q06678	367 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	PAA1	Q12447	191 aa	Known RBP	3.37	□□□□□ -1.87
SPN1	YPR133C	FMP16	Q12497	93 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	RIB3	Q99258	208 aa		3.37	□□□□□ -1.87
SPN1	YPR133C	GDH1	P07262	454 aa	Known RBP	3.36	□□□□□ -1.87
SPN1	YPR133C	YCR007C	P25354	239 aa		3.36	□□□□□ -1.87
SPN1	YPR133C	TFC1	P32367	649 aa		3.36	□□□□□ -1.87
SPN1	YPR133C	DPH5	P32469	300 aa	Predicted RBP	3.36	□□□□□ -1.87
SPN1	YPR133C	TMA19	P35691	167 aa	Known RBP	3.36	□□□□□ -1.87
SPN1	YPR133C	SPC34	P36131	295 aa		3.36	□□□□□ -1.87
SPN1	YPR133C	PHB2	P50085	310 aa		3.36	□□□□□ -1.87
SPN1	YPR133C	COS10	P52924	374 aa		3.36	□□□□□ -1.87
SPN1	YPR133C	YGL159W	P53110	370 aa		3.36	□□□□□ -1.87
SPN1	YPR133C	GAL83	Q04739	417 aa		3.36	□□□□□ -1.87
SPN1	YPR133C	CRC1	Q12289	327 aa		3.36	□□□□□ -1.87
SPN1	YPR133C	MED4	Q12343	284 aa		3.36	□□□□□ -1.87
SPN1	YPR133C	KIN28	P06242	306 aa		3.35	□□□□□ -1.87
SPN1	YPR133C	PHO85	P17157	305 aa		3.35	□□□□□ -1.87
SPN1	YPR133C	AUA1	P32450	94 aa		3.35	□□□□□ -1.87
SPN1	YPR133C	DOA4	P32571	926 aa		3.35	□□□□□ -1.87
SPN1	YPR133C	RAD23	P32628	398 aa	Known RBP	3.35	□□□□□ -1.87
SPN1	YPR133C	ZRT3	P34240	503 aa		3.35	□□□□□ -1.87
SPN1	YPR133C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
SPN1	YPR133C	NAT2	P37293	288 aa		3.35	□□□□□ -1.87
SPN1	YPR133C	MRH4	P53166	561 aa		3.35	□□□□□ -1.87
SPN1	YPR133C	SAY1	P53324	424 aa		3.35	□□□□□ -1.87
SPN1	YPR133C	NRK1	P53915	240 aa		3.35	□□□□□ -1.87
SPN1	YPR133C	FCY1	Q12178	158 aa		3.35	□□□□□ -1.87
SPN1	YPR133C	RPL24A	P04449	155 aa	Known RBP	3.34	□□□□□ -1.87
SPN1	YPR133C	TPK3	P05986	398 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	YLL053C	P0CD98	152 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	YHR212W-A	P0CX91	67 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	BGL2	P15703	313 aa	Known RBP	3.34	□□□□□ -1.87
SPN1	YPR133C	INO2	P26798	304 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	IMP1	P28627	190 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	MRPL6	P32904	214 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	ECT1	P33412	323 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	CBT1	P36038	271 aa	Predicted RBP	3.34	□□□□□ -1.87
SPN1	YPR133C	SWD2	P36104	329 aa	Predicted RBP	3.34	□□□□□ -1.87
SPN1	YPR133C	YND1	P40009	630 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	RRG9	P40156	214 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	FAR7	P43592	221 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	CCC1	P47818	322 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	RMR1	P53060	241 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	SRL4	Q03085	281 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	LIP2	Q06005	328 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	RFM1	Q12192	310 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	ATO3	Q12359	275 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	BBP1	Q12365	385 aa		3.34	□□□□□ -1.87
SPN1	YPR133C	MPD1	Q12404	318 aa	Known RBP	3.34	□□□□□ -1.87
SPN1	YPR133C	RPL18A	P0CX49	186 aa	Known RBP	3.33	□□□□□ -1.88
SPN1	YPR133C	RPL18B	P0CX50	186 aa	Known RBP	3.33	□□□□□ -1.88
SPN1	YPR133C	SNF4	P12904	322 aa		3.33	□□□□□ -1.88
SPN1	YPR133C	RNA14	P25298	677 aa	Known RBP	3.33	□□□□□ -1.88
SPN1	YPR133C	PDX3	P38075	228 aa	Known RBP	3.33	□□□□□ -1.88
SPN1	YPR133C	ECM31	P38122	312 aa		3.33	□□□□□ -1.88
SPN1	YPR133C	AIM10	P39965	576 aa	Known RBP	3.33	□□□□□ -1.88
SPN1	YPR133C	YJR056C	P47115	236 aa		3.33	□□□□□ -1.88
SPN1	YPR133C	TIM21	P53220	239 aa		3.33	□□□□□ -1.88
SPN1	YPR133C	OKP1	P53298	406 aa		3.33	□□□□□ -1.88
SPN1	YPR133C	RPL21A	Q02753	160 aa	Known RBP	3.33	□□□□□ -1.88
SPN1	YPR133C	MIX17	Q03667	156 aa		3.33	□□□□□ -1.88
SPN1	YPR133C	SMP3	Q04174	516 aa		3.33	□□□□□ -1.88
SPN1	YPR133C	YMR315W	Q04869	349 aa	Known RBP	3.33	□□□□□ -1.88
SPN1	YPR133C	LDS2	Q08218	356 aa		3.33	□□□□□ -1.88
SPN1	YPR133C	ORT1	Q12375	292 aa		3.33	□□□□□ -1.88
SPN1	YPR133C	EAF3	Q12432	401 aa		3.33	□□□□□ -1.88
SPN1	YPR133C	RPL21B	Q12672	160 aa	Known RBP	3.33	□□□□□ -1.88
SPN1	YPR133C	RPL25	P04456	142 aa	Known RBP	3.32	□□□□□ -1.88
SPN1	YPR133C	ARG80	P07249	177 aa		3.32	□□□□□ -1.88
SPN1	YPR133C	FBA1	P14540	359 aa	Known RBP	3.32	□□□□□ -1.88
SPN1	YPR133C	CDC23	P16522	626 aa		3.32	□□□□□ -1.88
SPN1	YPR133C	COQ3	P27680	312 aa		3.32	□□□□□ -1.88
SPN1	YPR133C	OAC1	P32332	324 aa		3.32	□□□□□ -1.88
SPN1	YPR133C	ARO4	P32449	370 aa	Known RBP	3.32	□□□□□ -1.88
SPN1	YPR133C	TOA2	P32774	122 aa		3.32	□□□□□ -1.88
SPN1	YPR133C	PHD1	P36093	366 aa		3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms