RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W AEP3Q12089 606 aa3.92□□□□□ -1.78
SSO1YPL232W TY1A-NL1Q12391 440 aaKnown RBP3.92□□□□□ -1.78
SSO1YPL232W TAR1Q8TGM6 124 aa3.92□□□□□ -1.78
SSO1YPL232W TRP4P07285 380 aaPredicted RBP3.91□□□□□ -1.78
SSO1YPL232W RPL3P14126 387 aaKnown RBP3.91□□□□□ -1.78
SSO1YPL232W RFC2P40348 353 aa3.91□□□□□ -1.78
SSO1YPL232W PRM5P40476 318 aa3.91□□□□□ -1.78
SSO1YPL232W MSE1P48525 536 aa3.91□□□□□ -1.78
SSO1YPL232W YMR181CQ03231 154 aa3.91□□□□□ -1.78
SSO1YPL232W NMA1Q06178 401 aaKnown RBP3.91□□□□□ -1.78
SSO1YPL232W ASR1Q06834 288 aa3.91□□□□□ -1.78
SSO1YPL232W YPR1Q12458 312 aa3.91□□□□□ -1.78
SSO1YPL232W IDP1P21954 428 aaKnown RBP3.9□□□□□ -1.79
SSO1YPL232W BUD23P25627 275 aaPredicted RBP3.9□□□□□ -1.79
SSO1YPL232W OCH1P31755 480 aa3.9□□□□□ -1.79
SSO1YPL232W ERG3P32353 365 aa3.9□□□□□ -1.79
SSO1YPL232W UTP30P36144 274 aaKnown RBP3.9□□□□□ -1.79
SSO1YPL232W PAU24P38155 120 aa3.9□□□□□ -1.79
SSO1YPL232W SLM4P38247 162 aa3.9□□□□□ -1.79
SSO1YPL232W IKI1P38874 309 aa3.9□□□□□ -1.79
SSO1YPL232W ATG18P43601 500 aa3.9□□□□□ -1.79
SSO1YPL232W YGR219WP53307 113 aa3.9□□□□□ -1.79
SSO1YPL232W FSH2Q05015 223 aa3.9□□□□□ -1.79
SSO1YPL232W ATG17Q06410 417 aa3.9□□□□□ -1.79
SSO1YPL232W INP53Q12271 1107 aa3.9□□□□□ -1.79
SSO1YPL232W GAL1P04385 528 aa3.89□□□□□ -1.79
SSO1YPL232W YLL053CP0CD98 152 aa3.89□□□□□ -1.79
SSO1YPL232W CKA1P15790 372 aa3.89□□□□□ -1.79
SSO1YPL232W LSB5P25369 354 aa3.89□□□□□ -1.79
SSO1YPL232W FUN26P31381 517 aa3.89□□□□□ -1.79
SSO1YPL232W MRP20P32387 263 aa3.89□□□□□ -1.79
SSO1YPL232W YBL010CP32788 280 aa3.89□□□□□ -1.79
SSO1YPL232W VAM7P32912 316 aa3.89□□□□□ -1.79
SSO1YPL232W YBR197CP38306 217 aa3.89□□□□□ -1.79
SSO1YPL232W YER137CP40083 148 aaKnown RBP3.89□□□□□ -1.79
SSO1YPL232W YJR120WP47157 116 aa3.89□□□□□ -1.79
SSO1YPL232W ALG9P53868 555 aaKnown RBP3.89□□□□□ -1.79
SSO1YPL232W LPP1Q04396 274 aa3.89□□□□□ -1.79
SSO1YPL232W TRI1Q05024 226 aa3.89□□□□□ -1.79
SSO1YPL232W PET18P25362 215 aa3.88□□□□□ -1.79
SSO1YPL232W RFA3P26755 122 aaKnown RBP3.88□□□□□ -1.79
SSO1YPL232W SFK1P35735 353 aa3.88□□□□□ -1.79
SSO1YPL232W MRPL38P35996 138 aaPredicted RBP3.88□□□□□ -1.79
SSO1YPL232W SRY1P36007 326 aa3.88□□□□□ -1.79
SSO1YPL232W MIC12P38341 106 aa3.88□□□□□ -1.79
SSO1YPL232W GEP4P38812 185 aa3.88□□□□□ -1.79
SSO1YPL232W SSO2P39926 295 aa3.88□□□□□ -1.79
SSO1YPL232W FMC1P40491 155 aa3.88□□□□□ -1.79
SSO1YPL232W YRB2P40517 327 aa3.88□□□□□ -1.79
SSO1YPL232W GAT4P40569 121 aa3.88□□□□□ -1.79
SSO1YPL232W PAM16P42949 149 aa3.88□□□□□ -1.79
SSO1YPL232W HAM1P47119 197 aaKnown RBP3.88□□□□□ -1.79
SSO1YPL232W DIE2P50076 525 aa3.88□□□□□ -1.79
SSO1YPL232W CAX4P53223 239 aa3.88□□□□□ -1.79
SSO1YPL232W ASI2P53895 289 aa3.88□□□□□ -1.79
SSO1YPL232W PEX10Q05568 337 aa3.88□□□□□ -1.79
SSO1YPL232W RPL24AP04449 155 aaKnown RBP3.87□□□□□ -1.79
SSO1YPL232W RPL9AP05738 191 aaKnown RBP3.87□□□□□ -1.79
SSO1YPL232W YPS1P32329 569 aa3.87□□□□□ -1.79
SSO1YPL232W ERG24P32462 438 aaKnown RBP3.87□□□□□ -1.79
SSO1YPL232W AGX1P43567 385 aa3.87□□□□□ -1.79
SSO1YPL232W COX12Q01519 83 aa3.87□□□□□ -1.79
SSO1YPL232W GRX5Q02784 150 aa3.87□□□□□ -1.79
SSO1YPL232W CAB5Q03941 241 aa3.87□□□□□ -1.79
SSO1YPL232W DPB4Q04603 196 aaKnown RBP3.87□□□□□ -1.79
SSO1YPL232W FRE5Q08908 694 aa3.87□□□□□ -1.79
SSO1YPL232W RKI1Q12189 258 aa3.87□□□□□ -1.79
SSO1YPL232W CYC7P00045 113 aa3.86□□□□□ -1.79
SSO1YPL232W FUS3P16892 353 aaKnown RBP3.86□□□□□ -1.79
SSO1YPL232W PAU2P32612 120 aa3.86□□□□□ -1.79
SSO1YPL232W AGA2P32781 87 aa3.86□□□□□ -1.79
SSO1YPL232W RPB7P34087 171 aa3.86□□□□□ -1.79
SSO1YPL232W QDR3P38227 689 aa3.86□□□□□ -1.79
SSO1YPL232W BUL1P48524 976 aa3.86□□□□□ -1.79
SSO1YPL232W BUD25P85052 153 aa3.86□□□□□ -1.79
SSO1YPL232W ASM4Q05166 528 aa3.86□□□□□ -1.79
SSO1YPL232W YDR286CQ05530 114 aa3.86□□□□□ -1.79
SSO1YPL232W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SSO1YPL232W IRC23Q08416 157 aa3.86□□□□□ -1.79
SSO1YPL232W YOR292CQ08743 309 aa3.86□□□□□ -1.79
SSO1YPL232W DCP1Q12517 231 aaPredicted RBP3.86□□□□□ -1.79
SSO1YPL232W HTB1P02293 131 aaKnown RBP3.85□□□□□ -1.79
SSO1YPL232W AAC1P04710 309 aa3.85□□□□□ -1.79
SSO1YPL232W YMR31P19955 123 aa3.85□□□□□ -1.79
SSO1YPL232W PRE7P23724 241 aaKnown RBP3.85□□□□□ -1.79
SSO1YPL232W ECM25P32525 599 aa3.85□□□□□ -1.79
SSO1YPL232W PCL7P40186 285 aa3.85□□□□□ -1.79
SSO1YPL232W YJL218WP40892 196 aaKnown RBP3.85□□□□□ -1.79
SSO1YPL232W YPI1P43587 155 aa3.85□□□□□ -1.79
SSO1YPL232W CPD1P53314 239 aa3.85□□□□□ -1.79
SSO1YPL232W CWC25P53854 179 aaKnown RBP3.85□□□□□ -1.79
SSO1YPL232W QCR7P00128 127 aa3.84□□□□□ -1.79
SSO1YPL232W PET494P07390 489 aaPredicted RBP3.84□□□□□ -1.79
SSO1YPL232W ATR1P13090 542 aa3.84□□□□□ -1.79
SSO1YPL232W RFA1P22336 621 aaKnown RBP3.84□□□□□ -1.79
SSO1YPL232W VMA5P31412 392 aaKnown RBP3.84□□□□□ -1.79
SSO1YPL232W SNL1P40548 159 aa3.84□□□□□ -1.79
SSO1YPL232W BXI1P48558 297 aa3.84□□□□□ -1.79
SSO1YPL232W UBP8P50102 471 aa3.84□□□□□ -1.79
SSO1YPL232W ALG13P53178 202 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms