RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C VHT1P53241 593 aa2.21□□□□□ -2.06
DNL4YOR005C YCL001W-AP87012 153 aa2.21□□□□□ -2.06
DNL4YOR005C YPL113CQ02961 396 aa2.21□□□□□ -2.06
DNL4YOR005C SEC13Q04491 297 aaKnown RBP2.21□□□□□ -2.06
DNL4YOR005C YPR127WQ06494 345 aa2.21□□□□□ -2.06
DNL4YOR005C ANT1Q06497 328 aa2.21□□□□□ -2.06
DNL4YOR005C PER33Q12144 273 aa2.21□□□□□ -2.06
DNL4YOR005C YLR046CQ12253 270 aa2.21□□□□□ -2.06
DNL4YOR005C MET2P08465 486 aa2.21□□□□□ -2.06
DNL4YOR005C RPL40AP0CH08 128 aaKnown RBP2.21□□□□□ -2.06
DNL4YOR005C RPL40BP0CH09 128 aaKnown RBP2.21□□□□□ -2.06
DNL4YOR005C RPL23AP0CX41 137 aaKnown RBP2.21□□□□□ -2.06
DNL4YOR005C RPL23BP0CX42 137 aaKnown RBP2.21□□□□□ -2.06
DNL4YOR005C ZWF1P11412 505 aaKnown RBP2.21□□□□□ -2.06
DNL4YOR005C ERD1P16151 362 aa2.21□□□□□ -2.06
DNL4YOR005C YMR31P19955 123 aa2.21□□□□□ -2.06
DNL4YOR005C LHP1P33399 275 aaKnown RBP2.21□□□□□ -2.06
DNL4YOR005C CDH1P53197 566 aa2.21□□□□□ -2.06
DNL4YOR005C YGR026WP53217 278 aa2.21□□□□□ -2.06
DNL4YOR005C PAU12P53343 120 aa2.21□□□□□ -2.06
DNL4YOR005C NRK1P53915 240 aa2.21□□□□□ -2.06
DNL4YOR005C SUR7P54003 302 aa2.21□□□□□ -2.06
DNL4YOR005C MET31Q03081 177 aa2.21□□□□□ -2.06
DNL4YOR005C TAZ1Q06510 381 aa2.21□□□□□ -2.06
DNL4YOR005C SRO7Q12038 1033 aa2.21□□□□□ -2.06
DNL4YOR005C YPL245WQ12179 454 aaKnown RBP2.21□□□□□ -2.06
DNL4YOR005C SME1Q12330 94 aaPredicted RBP2.21□□□□□ -2.06
DNL4YOR005C DGK1Q12382 290 aa2.21□□□□□ -2.06
DNL4YOR005C DCN1Q12395 269 aa2.21□□□□□ -2.06
DNL4YOR005C EAF3Q12432 401 aa2.21□□□□□ -2.06
DNL4YOR005C PCC1Q3E833 88 aa2.21□□□□□ -2.06
DNL4YOR005C PUT1P09368 476 aa2.2□□□□□ -2.06
DNL4YOR005C YBR121C-AP0C5L4 52 aa2.2□□□□□ -2.06
DNL4YOR005C SPS100P13130 326 aa2.2□□□□□ -2.06
DNL4YOR005C ADE1P27616 306 aa2.2□□□□□ -2.06
DNL4YOR005C SMB1P40018 196 aaKnown RBP2.2□□□□□ -2.06
DNL4YOR005C YIL029CP40538 142 aa2.2□□□□□ -2.06
DNL4YOR005C YIA6P40556 373 aa2.2□□□□□ -2.06
DNL4YOR005C PRM10P42946 383 aa2.2□□□□□ -2.06
DNL4YOR005C EAF6P47128 113 aa2.2□□□□□ -2.06
DNL4YOR005C SDT1P53078 280 aa2.2□□□□□ -2.06
DNL4YOR005C MDM34P53083 459 aa2.2□□□□□ -2.06
DNL4YOR005C SYF2P53277 215 aaPredicted RBP2.2□□□□□ -2.06
DNL4YOR005C MTQ1P53944 314 aa2.2□□□□□ -2.06
DNL4YOR005C YLR281CQ05863 155 aa2.2□□□□□ -2.06
DNL4YOR005C YPR091CQ06833 770 aa2.2□□□□□ -2.06
DNL4YOR005C RRP40Q08285 240 aaKnown RBP2.2□□□□□ -2.06
DNL4YOR005C FCY22Q12119 530 aa2.2□□□□□ -2.06
DNL4YOR005C RDI1Q12434 202 aa2.2□□□□□ -2.06
DNL4YOR005C YPR064WQ12492 139 aa2.2□□□□□ -2.06
DNL4YOR005C VMA9Q3E7B6 73 aa2.2□□□□□ -2.06
DNL4YOR005C HAP2P06774 265 aa2.2□□□□□ -2.06
DNL4YOR005C NAM2P11325 894 aa2.2□□□□□ -2.06
DNL4YOR005C POX1P13711 748 aa2.2□□□□□ -2.06
DNL4YOR005C CTA1P15202 515 aa2.2□□□□□ -2.06
DNL4YOR005C MRP17P28778 131 aa2.2□□□□□ -2.06
DNL4YOR005C EMP24P32803 203 aaKnown RBP2.2□□□□□ -2.06
DNL4YOR005C SPT4P32914 102 aaPredicted RBP2.2□□□□□ -2.06
DNL4YOR005C SDS24P38314 527 aa2.2□□□□□ -2.06
DNL4YOR005C PRS3P38689 320 aaKnown RBP2.2□□□□□ -2.06
DNL4YOR005C HTD2P38790 280 aaKnown RBP2.2□□□□□ -2.06
DNL4YOR005C GCV3P39726 170 aaPredicted RBP2.2□□□□□ -2.06
DNL4YOR005C SNN1P48232 102 aa2.2□□□□□ -2.06
DNL4YOR005C PAC10P48363 199 aa2.2□□□□□ -2.06
DNL4YOR005C VEL1P53058 206 aa2.2□□□□□ -2.06
DNL4YOR005C MTM1P53320 366 aa2.2□□□□□ -2.06
DNL4YOR005C ELP6Q04868 273 aa2.2□□□□□ -2.06
DNL4YOR005C RNH202Q05635 350 aa2.2□□□□□ -2.06
DNL4YOR005C MRX9Q07349 420 aaKnown RBP2.2□□□□□ -2.06
DNL4YOR005C ATG41Q12048 136 aa2.2□□□□□ -2.06
DNL4YOR005C YLR099W-AQ3E798 87 aa2.2□□□□□ -2.06
DNL4YOR005C UBR1P19812 1950 aa2.19□□□□□ -2.06
DNL4YOR005C COX9P07255 59 aa2.19□□□□□ -2.06
DNL4YOR005C RPL27AP0C2H6 136 aaKnown RBP2.19□□□□□ -2.06
DNL4YOR005C RPL27BP0C2H7 136 aaKnown RBP2.19□□□□□ -2.06
DNL4YOR005C RPS18AP0CX55 146 aaKnown RBP2.19□□□□□ -2.06
DNL4YOR005C RPS18BP0CX56 146 aaPredicted RBP2.19□□□□□ -2.06
DNL4YOR005C QRI5P32344 111 aa2.19□□□□□ -2.06
DNL4YOR005C PAU2P32612 120 aa2.19□□□□□ -2.06
DNL4YOR005C SHG1P38337 142 aa2.19□□□□□ -2.06
DNL4YOR005C RPS20P38701 121 aaKnown RBP2.19□□□□□ -2.06
DNL4YOR005C ASP1P38986 381 aaPredicted RBP2.19□□□□□ -2.06
DNL4YOR005C LSM4P40070 187 aaKnown RBP2.19□□□□□ -2.06
DNL4YOR005C YNL194CP40169 301 aa2.19□□□□□ -2.06
DNL4YOR005C YJR012CP47087 207 aa2.19□□□□□ -2.06
DNL4YOR005C IBA57P47158 497 aa2.19□□□□□ -2.06
DNL4YOR005C MCM22P47167 239 aa2.19□□□□□ -2.06
DNL4YOR005C PRP24P49960 444 aaKnown RBP2.19□□□□□ -2.06
DNL4YOR005C ARL3Q02804 198 aa2.19□□□□□ -2.06
DNL4YOR005C YDR209CQ03480 137 aa2.19□□□□□ -2.06
DNL4YOR005C PEX30Q06169 523 aa2.19□□□□□ -2.06
DNL4YOR005C CTR3Q06686 241 aa2.19□□□□□ -2.06
DNL4YOR005C DAP1Q12091 152 aa2.19□□□□□ -2.06
DNL4YOR005C TMS1Q12116 473 aa2.19□□□□□ -2.06
DNL4YOR005C YRA1Q12159 226 aaKnown RBP2.19□□□□□ -2.06
DNL4YOR005C YOL163WP0CF20 169 aa2.19□□□□□ -2.06
DNL4YOR005C SFK1P35735 353 aa2.19□□□□□ -2.06
DNL4YOR005C PAU24P38155 120 aa2.19□□□□□ -2.06
DNL4YOR005C ARC40P38328 384 aaKnown RBP2.19□□□□□ -2.06
DNL4YOR005C YHL026CP38740 315 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms