RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C AYR1P40471 297 aa2.58□□□□□ -2
SSN8YNL025C YIL067CP40514 678 aa2.58□□□□□ -2
SSN8YNL025C OST2P46964 130 aa2.58□□□□□ -2
SSN8YNL025C YGR017WP53210 297 aa2.58□□□□□ -2
SSN8YNL025C PGA1P53896 198 aa2.58□□□□□ -2
SSN8YNL025C SLM2P53955 656 aa2.58□□□□□ -2
SSN8YNL025C PET191Q02772 108 aa2.58□□□□□ -2
SSN8YNL025C YDR415CQ04033 374 aaPredicted RBP2.58□□□□□ -2
SSN8YNL025C YBL008W-AQ3E821 79 aa2.58□□□□□ -2
SSN8YNL025C YCL001W-BQ96VH2 84 aa2.58□□□□□ -2
SSN8YNL025C NUP157P40064 1391 aaKnown RBP2.58□□□□□ -2
SSN8YNL025C MBF1O14467 151 aaKnown RBP2.57□□□□□ -2
SSN8YNL025C STE7P06784 515 aa2.57□□□□□ -2
SSN8YNL025C RPL2AP0CX45 254 aaKnown RBP2.57□□□□□ -2
SSN8YNL025C RPL2BP0CX46 254 aaKnown RBP2.57□□□□□ -2
SSN8YNL025C ATR1P13090 542 aa2.57□□□□□ -2
SSN8YNL025C NSP1P14907 823 aaKnown RBP2.57□□□□□ -2
SSN8YNL025C RPB5P20434 215 aa2.57□□□□□ -2
SSN8YNL025C SPO13P23624 291 aa2.57□□□□□ -2
SSN8YNL025C CNB1P25296 175 aa2.57□□□□□ -2
SSN8YNL025C IMP1P28627 190 aa2.57□□□□□ -2
SSN8YNL025C UGX2P32772 223 aa2.57□□□□□ -2
SSN8YNL025C SHE2P36068 246 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SSN8YNL025C FLO5P38894 1075 aa2.57□□□□□ -2
SSN8YNL025C CHL4P38907 458 aa2.57□□□□□ -2
SSN8YNL025C AST2P39945 430 aaKnown RBP2.57□□□□□ -2
SSN8YNL025C YPL073CP40323 161 aa2.57□□□□□ -2
SSN8YNL025C DLS1P40366 167 aa2.57□□□□□ -2
SSN8YNL025C AVT7P40501 490 aa2.57□□□□□ -2
SSN8YNL025C GLC8P41818 229 aa2.57□□□□□ -2
SSN8YNL025C DIM1P41819 318 aaKnown RBP2.57□□□□□ -2
SSN8YNL025C MIC19P43594 170 aa2.57□□□□□ -2
SSN8YNL025C ERJ5P43613 295 aaPredicted RBP2.57□□□□□ -2
SSN8YNL025C UFD1P53044 361 aa2.57□□□□□ -2
SSN8YNL025C SDS23P53172 527 aa2.57□□□□□ -2
SSN8YNL025C YGR018CP53211 109 aa2.57□□□□□ -2
SSN8YNL025C CRZ1P53968 678 aa2.57□□□□□ -2
SSN8YNL025C YNL010WP53981 241 aaKnown RBP2.57□□□□□ -2
SSN8YNL025C LSM3P57743 89 aaKnown RBP2.57□□□□□ -2
SSN8YNL025C FMN1Q03778 218 aa2.57□□□□□ -2
SSN8YNL025C YMR320WQ04897 101 aa2.57□□□□□ -2
SSN8YNL025C LOA1Q06508 300 aa2.57□□□□□ -2
SSN8YNL025C YOL160WQ08321 113 aa2.57□□□□□ -2
SSN8YNL025C FCY1Q12178 158 aa2.57□□□□□ -2
SSN8YNL025C RTR2Q12378 196 aa2.57□□□□□ -2
SSN8YNL025C GEP5Q12393 293 aa2.57□□□□□ -2
SSN8YNL025C CDC7P06243 507 aa2.56□□□□□ -2
SSN8YNL025C PRE7P23724 241 aaKnown RBP2.56□□□□□ -2
SSN8YNL025C PTM1P32857 523 aa2.56□□□□□ -2
SSN8YNL025C TKL2P33315 681 aa2.56□□□□□ -2
SSN8YNL025C GPX1P36014 167 aa2.56□□□□□ -2
SSN8YNL025C MRPL17P36528 281 aa2.56□□□□□ -2
SSN8YNL025C YBR137WP38276 179 aa2.56□□□□□ -2
SSN8YNL025C YBR242WP38331 238 aa2.56□□□□□ -2
SSN8YNL025C YPT31P38555 223 aaKnown RBP2.56□□□□□ -2
SSN8YNL025C COS8P38723 381 aa2.56□□□□□ -2
SSN8YNL025C AIM2P39721 246 aa2.56□□□□□ -2
SSN8YNL025C YER189WP40104 122 aa2.56□□□□□ -2
SSN8YNL025C SER2P42941 309 aa2.56□□□□□ -2
SSN8YNL025C YFR054CP43622 192 aa2.56□□□□□ -2
SSN8YNL025C BIR1P47134 954 aa2.56□□□□□ -2
SSN8YNL025C MDM34P53083 459 aa2.56□□□□□ -2
SSN8YNL025C YGL088WP53151 121 aa2.56□□□□□ -2
SSN8YNL025C TPC1P53257 314 aa2.56□□□□□ -2
SSN8YNL025C ERV29P53337 310 aa2.56□□□□□ -2
SSN8YNL025C GIS2P53849 153 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SSN8YNL025C RNH201P53942 307 aa2.56□□□□□ -2
SSN8YNL025C AIM11P87275 137 aa2.56□□□□□ -2
SSN8YNL025C YPL113CQ02961 396 aa2.56□□□□□ -2
SSN8YNL025C DIG2Q03373 323 aaKnown RBP2.56□□□□□ -2
SSN8YNL025C CGI121Q03705 181 aaKnown RBP2.56□□□□□ -2
SSN8YNL025C HRI1Q05905 244 aaKnown RBP2.56□□□□□ -2
SSN8YNL025C YPL278CQ08990 100 aa2.56□□□□□ -2
SSN8YNL025C FCF2Q12035 217 aaPredicted RBP2.56□□□□□ -2
SSN8YNL025C BSC1Q12140 328 aa2.56□□□□□ -2
SSN8YNL025C ATP16Q12165 160 aa2.56□□□□□ -2
SSN8YNL025C PSF1Q12488 208 aa2.56□□□□□ -2
SSN8YNL025C NUP170P38181 1502 aa2.56□□□□□ -2
SSN8YNL025C PCL1P24867 279 aa2.55□□□□□ -2
SSN8YNL025C ATG15P25641 520 aa2.55□□□□□ -2
SSN8YNL025C PEP1P32319 1579 aa2.55□□□□□ -2
SSN8YNL025C YBL010CP32788 280 aa2.55□□□□□ -2
SSN8YNL025C SNC2P33328 115 aa2.55□□□□□ -2
SSN8YNL025C SKG1P36169 355 aa2.55□□□□□ -2
SSN8YNL025C PHO89P38361 574 aa2.55□□□□□ -2
SSN8YNL025C EDC2P40023 145 aaPredicted RBP2.55□□□□□ -2
SSN8YNL025C CAT5P41735 233 aa2.55□□□□□ -2
SSN8YNL025C GLR1P41921 483 aaKnown RBP2.55□□□□□ -2
SSN8YNL025C YFL067WP43537 175 aa2.55□□□□□ -2
SSN8YNL025C SOL1P50278 321 aa2.55□□□□□ -2
SSN8YNL025C ARO8P53090 500 aaKnown RBP2.55□□□□□ -2
SSN8YNL025C YGR050CP53231 118 aa2.55□□□□□ -2
SSN8YNL025C FMP41P53889 259 aaKnown RBP2.55□□□□□ -2
SSN8YNL025C TMA23Q03525 211 aa2.55□□□□□ -2
SSN8YNL025C YMR254CQ04838 102 aa2.55□□□□□ -2
SSN8YNL025C YDL180WQ12301 547 aa2.55□□□□□ -2
SSN8YNL025C TSC3Q3E790 80 aa2.55□□□□□ -2
SSN8YNL025C HTL1Q9URQ5 78 aa2.55□□□□□ -2
SSN8YNL025C PDR18P53756 1333 aa2.54□□□□□ -2
SSN8YNL025C PHO2P07269 559 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms