RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W ARG2P40360 574 aa2.1□□□□□ -2.07
UBP15YMR304W AYR1P40471 297 aa2.1□□□□□ -2.07
UBP15YMR304W AVT7P40501 490 aa2.1□□□□□ -2.07
UBP15YMR304W SMD3P43321 101 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W MOB2P43563 287 aa2.1□□□□□ -2.07
UBP15YMR304W ROG1P53118 685 aa2.1□□□□□ -2.07
UBP15YMR304W ANT1Q06497 328 aa2.1□□□□□ -2.07
UBP15YMR304W MRX9Q07349 420 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W HEM25Q07534 307 aa2.1□□□□□ -2.07
UBP15YMR304W YFH1Q07540 174 aa2.1□□□□□ -2.07
UBP15YMR304W PEX11Q12462 236 aa2.1□□□□□ -2.07
UBP15YMR304W YOL159C-AQ3E769 90 aa2.1□□□□□ -2.07
UBP15YMR304W YOR032W-AQ8TGS1 66 aa2.1□□□□□ -2.07
UBP15YMR304W COX2P00410 251 aa2.1□□□□□ -2.07
UBP15YMR304W RPS13P05756 151 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W RPL24BP24000 155 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W MEI5P32489 222 aa2.1□□□□□ -2.07
UBP15YMR304W SPS18P32572 300 aa2.1□□□□□ -2.07
UBP15YMR304W YPT53P36019 220 aa2.1□□□□□ -2.07
UBP15YMR304W APT2P36973 181 aa2.1□□□□□ -2.07
UBP15YMR304W ADH5P38113 351 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W UMP1P38293 148 aa2.1□□□□□ -2.07
UBP15YMR304W EHT1P38295 451 aa2.1□□□□□ -2.07
UBP15YMR304W YHR127WP38833 243 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W ERG28P40030 148 aa2.1□□□□□ -2.07
UBP15YMR304W MPM1P40364 252 aa2.1□□□□□ -2.07
UBP15YMR304W FMC1P40491 155 aa2.1□□□□□ -2.07
UBP15YMR304W NSE4P43124 402 aa2.1□□□□□ -2.07
UBP15YMR304W YFR020WP43600 232 aa2.1□□□□□ -2.07
UBP15YMR304W ATG27P46989 271 aa2.1□□□□□ -2.07
UBP15YMR304W RPA34P47006 233 aaPredicted RBP2.1□□□□□ -2.07
UBP15YMR304W VHT1P53241 593 aa2.1□□□□□ -2.07
UBP15YMR304W TEX1P53851 422 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W UBC7Q02159 165 aa2.1□□□□□ -2.07
UBP15YMR304W CGI121Q03705 181 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W YLR012CQ07927 99 aa2.1□□□□□ -2.07
UBP15YMR304W ATP4P05626 244 aa2.09□□□□□ -2.07
UBP15YMR304W CLN2P20438 545 aa2.09□□□□□ -2.07
UBP15YMR304W CWP1P28319 239 aa2.09□□□□□ -2.07
UBP15YMR304W CMC1P36064 111 aa2.09□□□□□ -2.07
UBP15YMR304W YBR071WP38243 211 aa2.09□□□□□ -2.07
UBP15YMR304W GPP2P40106 250 aaKnown RBP2.09□□□□□ -2.07
UBP15YMR304W PAN6P40459 309 aa2.09□□□□□ -2.07
UBP15YMR304W TAH11P47112 604 aa2.09□□□□□ -2.07
UBP15YMR304W VEL1P53058 206 aa2.09□□□□□ -2.07
UBP15YMR304W RMD9P53140 646 aaKnown RBP2.09□□□□□ -2.07
UBP15YMR304W SYF2P53277 215 aaPredicted RBP2.09□□□□□ -2.07
UBP15YMR304W YPL077CQ02831 240 aa2.09□□□□□ -2.07
UBP15YMR304W ELC1Q03071 99 aa2.09□□□□□ -2.07
UBP15YMR304W YDR209CQ03480 137 aa2.09□□□□□ -2.07
UBP15YMR304W AVO2Q04749 426 aa2.09□□□□□ -2.07
UBP15YMR304W STP4Q07351 490 aa2.09□□□□□ -2.07
UBP15YMR304W FCY1Q12178 158 aa2.09□□□□□ -2.07
UBP15YMR304W LAS17Q12446 633 aa2.09□□□□□ -2.07
UBP15YMR304W FOL3Q12676 427 aaPredicted RBP2.09□□□□□ -2.07
UBP15YMR304W BEM2P39960 2167 aaKnown RBP2.09□□□□□ -2.08
UBP15YMR304W SEM1O94742 89 aa2.09□□□□□ -2.08
UBP15YMR304W PAU19P0CE85 124 aa2.09□□□□□ -2.08
UBP15YMR304W PAU21P0CE86 164 aa2.09□□□□□ -2.08
UBP15YMR304W PAU22P0CE87 164 aa2.09□□□□□ -2.08
UBP15YMR304W YOL163WP0CF20 169 aa2.09□□□□□ -2.08
UBP15YMR304W TY2A-FP0CX61 438 aa2.09□□□□□ -2.08
UBP15YMR304W TY2A-GR2P0CX62 438 aa2.09□□□□□ -2.08
UBP15YMR304W ERD1P16151 362 aa2.09□□□□□ -2.08
UBP15YMR304W PAU3P25610 124 aa2.09□□□□□ -2.08
UBP15YMR304W YJL132WP47014 750 aa2.09□□□□□ -2.08
UBP15YMR304W NPY1P53164 384 aa2.09□□□□□ -2.08
UBP15YMR304W YAP6Q03935 383 aa2.09□□□□□ -2.08
UBP15YMR304W DCI1Q08558 271 aa2.09□□□□□ -2.08
UBP15YMR304W IES4Q08561 116 aa2.09□□□□□ -2.08
UBP15YMR304W YDR119W-AQ2V2P9 66 aa2.09□□□□□ -2.08
UBP15YMR304W RGS2Q99188 309 aa2.09□□□□□ -2.08
UBP15YMR304W OPI3P05375 206 aa2.09□□□□□ -2.08
UBP15YMR304W GCY1P14065 312 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
UBP15YMR304W CDC34P14682 295 aa2.09□□□□□ -2.08
UBP15YMR304W NTF2P33331 125 aaKnown RBP2.09□□□□□ -2.08
UBP15YMR304W CAK1P43568 368 aaPredicted RBP2.09□□□□□ -2.08
UBP15YMR304W WSC2P53832 503 aa2.09□□□□□ -2.08
UBP15YMR304W DYN2Q02647 92 aa2.09□□□□□ -2.08
UBP15YMR304W DGA1Q08650 418 aa2.09□□□□□ -2.08
UBP15YMR304W YOR385WQ08909 290 aa2.09□□□□□ -2.08
UBP15YMR304W SLF1Q12034 447 aaKnown RBP2.09□□□□□ -2.08
UBP15YMR304W TGL5Q12043 749 aa2.09□□□□□ -2.08
UBP15YMR304W USB1Q12208 290 aaKnown RBP2.09□□□□□ -2.08
UBP15YMR304W MID2P36027 376 aa2.08□□□□□ -2.08
UBP15YMR304W NDT80P38830 627 aa2.08□□□□□ -2.08
UBP15YMR304W PRE5P40302 234 aaKnown RBP2.08□□□□□ -2.08
UBP15YMR304W TIR3P40552 269 aa2.08□□□□□ -2.08
UBP15YMR304W STE24P47154 453 aa2.08□□□□□ -2.08
UBP15YMR304W LYS20P48570 428 aaKnown RBP2.08□□□□□ -2.08
UBP15YMR304W RIB4P50861 169 aaPredicted RBP2.08□□□□□ -2.08
UBP15YMR304W APJ1P53940 528 aa2.08□□□□□ -2.08
UBP15YMR304W RHO4Q00246 291 aa2.08□□□□□ -2.08
UBP15YMR304W SCP1Q08873 200 aa2.08□□□□□ -2.08
UBP15YMR304W PCC1Q3E833 88 aa2.08□□□□□ -2.08
UBP15YMR304W COX5AP00424 153 aa2.08□□□□□ -2.08
UBP15YMR304W MCK1P21965 375 aaKnown RBP2.08□□□□□ -2.08
UBP15YMR304W ERG8P24521 451 aa2.08□□□□□ -2.08
UBP15YMR304W MRPL28P36527 147 aa2.08□□□□□ -2.08
UBP15YMR304W YHL049CP38722 271 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms