RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C YKL075CP36083 450 aa4.28□□□□□ -1.72
NUP116YMR047C PAC2P39937 518 aa4.28□□□□□ -1.72
NUP116YMR047C RPS26AP39938 119 aaKnown RBP4.28□□□□□ -1.72
NUP116YMR047C RPS26BP39939 119 aaKnown RBP4.28□□□□□ -1.72
NUP116YMR047C SNO3P43544 222 aa4.28□□□□□ -1.72
NUP116YMR047C YFR057WP43625 151 aa4.28□□□□□ -1.72
NUP116YMR047C HSV2P50079 448 aaPredicted RBP4.28□□□□□ -1.72
NUP116YMR047C TPS1Q00764 495 aaKnown RBP4.28□□□□□ -1.72
NUP116YMR047C TSA2Q04120 196 aa4.28□□□□□ -1.72
NUP116YMR047C SEI1Q06058 285 aa4.28□□□□□ -1.72
NUP116YMR047C WTM2Q12206 467 aa4.28□□□□□ -1.72
NUP116YMR047C YOS1Q3E834 85 aa4.28□□□□□ -1.72
NUP116YMR047C COX5BP00425 151 aa4.28□□□□□ -1.72
NUP116YMR047C RPL31AP0C2H8 113 aaKnown RBP4.28□□□□□ -1.72
NUP116YMR047C RPL31BP0C2H9 113 aaKnown RBP4.28□□□□□ -1.72
NUP116YMR047C YOL163WP0CF20 169 aa4.28□□□□□ -1.72
NUP116YMR047C ARO2P28777 376 aaKnown RBP4.28□□□□□ -1.72
NUP116YMR047C PSD1P39006 500 aa4.28□□□□□ -1.72
NUP116YMR047C COQ10Q08058 207 aa4.28□□□□□ -1.72
NUP116YMR047C DET1Q99288 334 aaKnown RBP4.28□□□□□ -1.72
NUP116YMR047C SAL1D6W196 494 aa4.28□□□□□ -1.72
NUP116YMR047C TIM9O74700 87 aa4.28□□□□□ -1.72
NUP116YMR047C SFH5P47008 294 aa4.28□□□□□ -1.72
NUP116YMR047C CDH1P53197 566 aa4.28□□□□□ -1.72
NUP116YMR047C BOR1P53838 576 aa4.28□□□□□ -1.72
NUP116YMR047C ADH6Q04894 360 aaKnown RBP4.28□□□□□ -1.72
NUP116YMR047C FCY22Q12119 530 aa4.28□□□□□ -1.72
NUP116YMR047C ARP2P32381 391 aaKnown RBP4.27□□□□□ -1.73
NUP116YMR047C MRPL11P36521 249 aaPredicted RBP4.27□□□□□ -1.73
NUP116YMR047C MRPL39P36533 70 aa4.27□□□□□ -1.73
NUP116YMR047C AVT7P40501 490 aa4.27□□□□□ -1.73
NUP116YMR047C OGG1P53397 376 aaPredicted RBP4.27□□□□□ -1.73
NUP116YMR047C DIG2Q03373 323 aaKnown RBP4.27□□□□□ -1.73
NUP116YMR047C ATC1Q04005 294 aa4.27□□□□□ -1.73
NUP116YMR047C ENB1Q08299 606 aa4.27□□□□□ -1.73
NUP116YMR047C THI72Q08579 599 aa4.27□□□□□ -1.73
NUP116YMR047C SWT1Q12104 458 aa4.27□□□□□ -1.73
NUP116YMR047C POM33Q12164 279 aa4.27□□□□□ -1.73
NUP116YMR047C PRR2Q12310 699 aa4.27□□□□□ -1.73
NUP116YMR047C APL3P38065 1025 aa4.27□□□□□ -1.73
NUP116YMR047C SOL3P38858 249 aa4.27□□□□□ -1.73
NUP116YMR047C RRG9P40156 214 aa4.27□□□□□ -1.73
NUP116YMR047C NCE103P53615 221 aa4.27□□□□□ -1.73
NUP116YMR047C POS5Q06892 414 aa4.27□□□□□ -1.73
NUP116YMR047C THP1Q08231 455 aa4.27□□□□□ -1.73
NUP116YMR047C ATG5Q12380 294 aa4.27□□□□□ -1.73
NUP116YMR047C PRP46Q12417 451 aaPredicted RBP4.27□□□□□ -1.73
NUP116YMR047C MED11Q99278 115 aa4.27□□□□□ -1.73
NUP116YMR047C GCN1P33892 2672 aaKnown RBP4.27□□□□□ -1.73
NUP116YMR047C VPS63O13549 108 aa4.26□□□□□ -1.73
NUP116YMR047C NAM2P11325 894 aa4.26□□□□□ -1.73
NUP116YMR047C SNC1P31109 117 aa4.26□□□□□ -1.73
NUP116YMR047C SNC2P33328 115 aa4.26□□□□□ -1.73
NUP116YMR047C YJL193WP39542 402 aa4.26□□□□□ -1.73
NUP116YMR047C YIL024CP40543 189 aa4.26□□□□□ -1.73
NUP116YMR047C VMA21P41806 77 aa4.26□□□□□ -1.73
NUP116YMR047C SSY5P47002 699 aa4.26□□□□□ -1.73
NUP116YMR047C GPI11Q06636 219 aa4.26□□□□□ -1.73
NUP116YMR047C VMA9Q3E7B6 73 aa4.26□□□□□ -1.73
NUP116YMR047C ARF1P11076 181 aaKnown RBP4.26□□□□□ -1.73
NUP116YMR047C SEC22P22214 214 aa4.26□□□□□ -1.73
NUP116YMR047C MEK1P24719 497 aaPredicted RBP4.26□□□□□ -1.73
NUP116YMR047C SLC1P33333 303 aa4.26□□□□□ -1.73
NUP116YMR047C ARN2P38724 620 aa4.26□□□□□ -1.73
NUP116YMR047C SKN7P38889 622 aa4.26□□□□□ -1.73
NUP116YMR047C YFL054CP43549 646 aa4.26□□□□□ -1.73
NUP116YMR047C YGL114WP53134 725 aa4.26□□□□□ -1.73
NUP116YMR047C SCW11P53189 542 aa4.26□□□□□ -1.73
NUP116YMR047C VAR1P02381 398 aa4.26□□□□□ -1.73
NUP116YMR047C PEP4P07267 405 aaKnown RBP4.26□□□□□ -1.73
NUP116YMR047C HAP3P13434 144 aa4.26□□□□□ -1.73
NUP116YMR047C DPM1P14020 267 aaKnown RBP4.26□□□□□ -1.73
NUP116YMR047C TMA19P35691 167 aaKnown RBP4.26□□□□□ -1.73
NUP116YMR047C GPX1P36014 167 aa4.26□□□□□ -1.73
NUP116YMR047C RIB5P38145 238 aa4.26□□□□□ -1.73
NUP116YMR047C PRY1P47032 299 aa4.26□□□□□ -1.73
NUP116YMR047C TAD2P47058 250 aa4.26□□□□□ -1.73
NUP116YMR047C YJR115WP47152 169 aa4.26□□□□□ -1.73
NUP116YMR047C TYW3P53177 273 aa4.26□□□□□ -1.73
NUP116YMR047C SDC1Q03323 175 aa4.26□□□□□ -1.73
NUP116YMR047C RPS21BQ3E754 87 aaKnown RBP4.26□□□□□ -1.73
NUP116YMR047C THP2O13539 261 aaKnown RBP4.25□□□□□ -1.73
NUP116YMR047C CYC7P00045 113 aa4.25□□□□□ -1.73
NUP116YMR047C ACB1P31787 87 aa4.25□□□□□ -1.73
NUP116YMR047C SKP1P52286 194 aa4.25□□□□□ -1.73
NUP116YMR047C YNR034W-AQ3E841 98 aa4.25□□□□□ -1.73
NUP116YMR047C GAS1P22146 559 aaKnown RBP4.25□□□□□ -1.73
NUP116YMR047C HSP150P32478 413 aa4.25□□□□□ -1.73
NUP116YMR047C RLM1Q12224 676 aa4.25□□□□□ -1.73
NUP116YMR047C WTM1Q12363 437 aaKnown RBP4.25□□□□□ -1.73
NUP116YMR047C FOL3Q12676 427 aaPredicted RBP4.25□□□□□ -1.73
NUP116YMR047C RPS25BP0C0T4 108 aaKnown RBP4.24□□□□□ -1.73
NUP116YMR047C YCR023CP25351 611 aa4.24□□□□□ -1.73
NUP116YMR047C GLC7P32598 312 aaKnown RBP4.24□□□□□ -1.73
NUP116YMR047C EMP24P32803 203 aaKnown RBP4.24□□□□□ -1.73
NUP116YMR047C PRE6P40303 254 aaKnown RBP4.24□□□□□ -1.73
NUP116YMR047C AVT4P50944 713 aa4.24□□□□□ -1.73
NUP116YMR047C MPC1P53157 130 aaKnown RBP4.24□□□□□ -1.73
NUP116YMR047C CAB5Q03941 241 aa4.24□□□□□ -1.73
NUP116YMR047C COQ11Q05892 277 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 107.7 ms